Corynebacterium pseudodiphtheriticum: L9H27_04915
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Entry
L9H27_04915 CDS
T08839
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
cpsp
Corynebacterium pseudodiphtheriticum
Pathway
cpsp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L9H27_04915 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpsp03400
]
L9H27_04915 (uvrA)
DNA repair and recombination proteins [BR:
cpsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L9H27_04915 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L9H27_04915 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
UvrA_DNA-bind
ABC_tran
SMC_N
AAA_29
AAA_21
nSTAND1
APS_kinase
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_18
AAA_16
CCDC24
TylF
Motif
Other DBs
NCBI-ProteinID:
UQV57063
LinkDB
All DBs
Position
1093861..1096704
Genome browser
AA seq
947 aa
AA seq
DB search
MADRLVVKGAREHNLKGVDIDLPRDKMIAFTGLSGSGKSSLAFDTIFAEGQRRYVESLSS
YARMFLGQMDKPDVEFIEGLSPAVSIDQKSTNHNPRSTVGTITEIYDYLRLLFSRAGTPH
CPTCDAVIERQTTQMIVDQVLAHEEKAKFQVLAPVVRTRKGEFVDLFADLSAQGFSRARI
DGEIYQLSDPPTLKKQIKHDIDVIVDRLQVKASQKQRLTDSVETALRLADGLVTIDFVDD
PDSTRMFSENSACPNGHALTIDEYEPRSFSFNSPYGACPSCDGLGSRHEVDQDLLIPDPD
APANKAVQPWYASPNQRYFVKLVEGLAKTLDFDPETPFSQLTKQQRDALVNGTKTEVRVR
YRNRYGRQRDWTAPFEGAAGYVRRKLDTAESDSQKDRFMAYTRQVPCKKCKGTRLKPEIL
AVRLASTSHGELSIAGLAELPIEEATQFLDTLQLDHRNEIIAGAVLKEIQARLQFLVDVG
LTYLTLNRGASTLSGGEAQRIRLATQIGAGLAGVLYVLDEPSIGLHQRDNHRLIATLQRL
RDLGNTLIVVEHDEDTIRASDWMVDIGPRAGEYGGEVVYQGAPAGIVDCPGSLTGDYLSG
RKVLAVPGKRRPIDKERQLTVVGARENNLRGINVTIPLGVLCCITGVSGSGKSTVVNGIL
AKTLANELNRARQVPGRAKRVEGVENLDKMVQVDQSPIGRTPRSNPATYTGVFDKIRNLF
AETQEAKVRGYKPGRFSFNVKGGRCESCQGEGTLKIEMNFLPDVFVPCEVCQGARYNRET
LEVHYKGKNIAEVLNMPISEAAEFFEPITSIHRYLATLVDVGLGYVRLGQSATTLSGGEA
QRVKLASELQKRSHGRTVYILDEPTTGLHFEDIRRLMLVIQGLVDKGNSVLIIEHNLDVI
KAADWIVDMGPEGGSGGGTVVAQGTPEDVAKVEASYTGQFLAEILHA
NT seq
2844 nt
NT seq
+upstream
nt +downstream
nt
gtggcggatcgtttggtggtcaaaggtgcacgcgaacataacctaaaaggcgtggacatt
gatttgccgcgcgataagatgatcgcgtttaccgggctttctggctcgggtaaatcctca
ctggcgttcgatactatttttgccgaagggcaacgtcgatatgtggaatcattgtcttcg
tatgcccgtatgttcctcggccaaatggacaagccggacgtcgagtttattgaaggcttg
tcgccagcggtttcaattgaccagaagtcaaccaaccacaacccccgttcgactgtcggg
acgatcaccgagatttacgactacttgcgtttgctgttttcgcgtgcaggaaccccgcat
tgtcctacctgcgatgccgtgatcgaacggcaaaccacacaaatgatcgtcgatcaggtg
cttgcgcacgaggaaaaagctaaattccaggtgctagcgccagtcgtgcgcacacgcaag
ggcgagtttgtggatctgtttgctgatttgtcggcacaaggtttttctcgcgcacggatt
gatggtgaaatctatcagctgagtgatccgccgacactgaaaaagcagatcaagcacgat
attgacgtcatcgtggaccgtttgcaggttaaggcttcgcagaaacaacgcctaactgat
tcggtcgagacggcgttgcggcttgccgacggcctggtgaccatagattttgttgatgat
ccggattctactcggatgttttctgagaactccgcctgcccaaacgggcatgctctgacg
attgatgagtatgaaccccgctccttttcctttaactcgccgtacggtgcttgcccgagt
tgtgacggtttaggctcacgccacgaggtggaccaggatttgttgattccggatccggat
gccccagccaataaggcggtacagccctggtacgccagcccgaatcaacggtatttcgtt
aaattagtcgaaggtctggccaagacactggattttgacccggagacaccgttttcgcaa
ctgactaagcagcagcgtgatgcgctggttaatggcacgaaaactgaagttcgtgtgcgc
taccgcaaccgttacggtcgccagcgcgattggacggccccgttcgaaggtgcggcaggg
tatgtgcgtcgcaagctggatactgccgaatcggattcacaaaaagaccgtttcatggct
tatacccgccaggtgccgtgcaagaagtgcaagggcacacgcttgaaaccggagatcctc
gctgtgcggctggcttctacctcacatggtgagctttcaatcgcagggctggcagagcta
ccgattgaagaagccacgcagttcctggatacgctgcagttggatcaccgtaacgaaatc
atcgctggtgcagtactcaaagagatccaagcgcgtctgcaatttcttgtcgacgtcgga
ctgacgtatctgacccttaaccggggggcttccactttgtcgggaggtgaggcccagcgt
atccgcttggccacgcaaatcggagccgggctcgccggtgtgttgtacgtgttggatgag
ccgtctattggtttgcatcagcgtgataatcacaggttaatcgctacgttgcagcgcttg
cgcgatttgggcaacaccttgattgtcgtcgaacatgacgaggacacgattcgtgcctcg
gattggatggtcgatattggcccgcgcgccggtgaatatggcggcgaggtcgtttatcag
ggggcccctgcagggattgtggattgcccgggatcgttaaccggggattacctgtctggg
cgtaaggttttggcagttccaggaaagcgtcgtccaattgataaggagcggcagctgacc
gttgttggtgctcgggaaaataatctgcgtggcatcaacgtcaccattccgctaggagtg
ctgtgttgcatcacgggagtttcgggatcgggaaaatctaccgtggtcaacggaattttg
gcgaagactttggccaacgagcttaaccgtgcccgtcaggttccgggtcgcgcaaagcgc
gtggaaggtgttgaaaacctggacaagatggtgcaggtggaccagtcgccaattggccgc
acaccgcgctcgaacccggccacgtataccggtgtgtttgataagatccgcaacctgttt
gccgaaacgcaagaggctaaggtgcgcggttataagcctgggcgtttctccttcaacgtg
aagggagggcgttgcgaatcctgtcaaggcgaaggcacgctgaagattgagatgaacttc
cttccggatgtgtttgtgccctgtgaggtgtgccagggcgcgcgttataaccgggaaaca
ctggaagtgcattataaaggcaaaaatattgccgaagtgctgaatatgccaatttcggaa
gcagccgagttcttcgagccgattacttcaatccatcgctatctagcgacgcttgtcgac
gtcggcttgggctacgtgcgcttggggcaatcagcgacgacgctgtccggtggtgaagcg
cagcgggtgaaactggcatcggagctgcaaaagcgttcgcatggtcgcactgtctatatt
ctggacgagccgaccactgggttgcactttgaggacattcgccgcttgatgttggtaatt
caaggcctggtggacaaagggaattcagtgctgatcattgagcataacctggatgtaatt
aaggcagcagactggattgtcgacatggggcccgaaggcggctctggtggcggcaccgtg
gtggcgcaaggtactccagaggatgtggcgaaggtggaagcctcttataccgggcaattt
ttggcggaaatcctgcatgcttag
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