Corynebacterium pseudodiphtheriticum: L9H27_06005
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Entry
L9H27_06005 CDS
T08839
Name
(GenBank) HRDC domain-containing protein
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cpsp
Corynebacterium pseudodiphtheriticum
Brite
KEGG Orthology (KO) [BR:
cpsp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpsp03016
]
L9H27_06005
Enzymes [BR:
cpsp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
L9H27_06005
Transfer RNA biogenesis [BR:
cpsp03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
L9H27_06005
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
UQV55351
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Position
1328714..1329937
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AA seq
407 aa
AA seq
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MTEFLRRPAAGIPPVLTTPQDFHEAAEAIAGGHGPIAIDTERASAFRYNDRAFLVQIKRA
GAGTFLFAPEGVRQHLTEALSPVINNLTWVVHAAVSDLPCLAWLGLYPAQLLDTELGGRL
AGLSRVGLAAMYEDLLGVRVAKEHSAQNWSSTPLPKPWVAYAALDVEKLLELAAEVEYLL
RSQGKWEWALEEFEYVRNQHATITGPEPRAWHLMKGMRGLKIPRQLAVARELWLIRETTA
ANDDVAPGSLLPNKVLLAFANIRPNTLSQLTRVRGSQNSRLAPAVWLTAIQQAEALAEVE
LPIPGKGELAYWYSSGGINTRNWKKNDPDSWNTWQLIRDDLNVFADEFAVPTENLISVAK
AKNLTWDITVAKTILSEGDLEASFTKHGLREWQKDIIWPIFADFLPS
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaattccttcgtcgcccagccgcgggtatcccgcccgtactgacaacccctcag
gactttcacgaagcggcggaggcaatcgccggtgggcacggaccaatcgcgattgataca
gaacgtgcttccgcatttcgctacaacgatcgcgcttttttagtccagattaaacgcgcg
ggtgccggtacctttcttttcgcaccagaaggcgtccgccagcacctcaccgaagcctta
tcacccgtcatcaacaacctaacttgggtggtacacgctgcagtatcagatcttccctgt
cttgcctggcttgggctgtacccagcacagctacttgacacagaactcggcggtcgtcta
gctggcttatcccgtgtcggtctcgctgcaatgtatgaggatttacttggcgtacgcgta
gccaaagaacacagcgcgcaaaactggtcctcgacgccgttacccaaaccatgggtcgct
tatgctgccctcgatgtcgaaaaattactcgagctggctgccgaggtagagtatctttta
cgcagccaaggaaagtgggaatgggcactggaagagttcgagtatgtgcgcaaccaacac
gccacaatcaccgggccagaaccccgcgcgtggcatttgatgaaagggatgcgcggactc
aaaatacctcgacaattggcagttgctcgcgagctgtggctaattcgggagaccactgca
gcaaacgatgatgttgcaccaggcagtctactaccgaataaggtcctactcgccttcgct
aatatccgccccaacacgctctctcaattaacacgcgttcgtggctcacaaaattcacgg
ttagcaccagcagtgtggttgaccgcaattcaacaggctgaagcattagcagaggtggag
cttccaattcctggaaaaggagaattagcgtattggtattcgtcgggtggcattaatacc
cggaattggaagaaaaacgaccccgactcttggaatacctggcaactcattcgggacgat
ctcaatgtcttcgccgacgaatttgctgtgcctacagagaatttaatcagcgttgccaag
gcaaaaaatctcacctgggatattaccgtcgcgaaaaccattctttccgaaggcgatcta
gaagcgtcttttacaaaacacggtttgcgcgaatggcaaaaagatattatttggcctatt
tttgctgattttcttccaagctaa
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