Corynebacterium pseudodiphtheriticum: L9H27_06850
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Entry
L9H27_06850 CDS
T08839
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
cpsp
Corynebacterium pseudodiphtheriticum
Pathway
cpsp03030
DNA replication
cpsp03430
Mismatch repair
cpsp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
L9H27_06850 (dnaE)
03430 Mismatch repair
L9H27_06850 (dnaE)
03440 Homologous recombination
L9H27_06850 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpsp03032
]
L9H27_06850 (dnaE)
03400 DNA repair and recombination proteins [BR:
cpsp03400
]
L9H27_06850 (dnaE)
Enzymes [BR:
cpsp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
L9H27_06850 (dnaE)
DNA replication proteins [BR:
cpsp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
L9H27_06850 (dnaE)
DNA repair and recombination proteins [BR:
cpsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
L9H27_06850 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
UQV55503
LinkDB
All DBs
Position
complement(1517615..1521193)
Genome browser
AA seq
1192 aa
AA seq
DB search
MAKKSSFVHLHNHTEFSMLDGMAKVDLLSEEVNRQEMPAVGMTDHGNMFGADAFYRRMTS
KGIKPIIGIEAYMAPESRFNKNRVRWGTPDQKRDDVSASGAYLHQTMLAENATGLKNLFK
LSSLASYEGQLGKWPRMDAELIAEHADGIIATTGCPSGDVQTRLRLGQFNQALEAAAMWQ
DIYGKENYFLELMDHGLDIEKRTRDQLLEIGKRLDLPPLVTNDCHYVLQSQAKAHEAMLC
VQTGKTFQDPDRFKFDGDGYYIKSAAEMRESWDHMVPDGCDNTLWIAERVGDYSSMWEEH
SHDRMPVADVPEGYTPTTWLHHEVMEGLAERFPGQEVPREYIERAEYEIEVIDGKGYPSY
FLIVAEIIKYARSVGIWVGPGRGSAAGALVAYALTITNIDPIEHGLLFERFLNPERPSAP
DIDIDFDDRRRGEMITYAAERWGEDKIAQVITFGTVKTKQAIKDAAKVHFGQPGFQMADR
INGALPAPIMAKDIPLSGIMDPEHERYSEATEVRNLIESDPDVKKIYDTARGLEGVVRQP
GVHACAVIMASVPLMEHIPMWKRNADGAIITGWDYPACEAIGLLKMDFLGLRNLTVIGDA
LRNIRQNRGEEIDLETLMPDDESVSEVYRLLSRGETLGVFQLDSTGMQELLKRMNPTGFK
DIVAALALYRPGPMGVNAHLDYADRKNGRKPITPIHPELAEPLEEILAETYGLIVYQEQI
MRISQKLANYTAGEADGFRKAMGKKKPEVLAQQYEKFSAGMAENGYSKEACDTLWGVIEP
FASYAFNKSHAAGYGLVSFWTGYLKAYYTAEYMAALLTSVGDKKDKSAIYLADCRHLGIK
VMPPDVNESDVEFMAVGKDIRYGMGAVRNVGTEVVNSIIKTRKQKGAYRSFGDYLDKIEL
LPCSKRITEALIKAGAFDSLGHPRKGLMLIQEDAVDSVQSTKKAADKGQFDLFAGMGGDD
SEQNAFTITVPDESWERKHELALEREMLGLYVSGHPLDGYEQALASYIDTALTTVVSGEL
KPKQNVVIGGIISNVDRRFSKKDGSPWAIVTIEDHHGAQVDVWVFSKAYSLVAEDIVEDN
IVLFKAQIQVWGDGDQKVIGSDMRVPELGRGGGAGLPLRLHLTTQQCSMEAIAALKSVLL
DHPGDTEVYLTLSHGEAEEVLVLGDHLTVDRSNSLMGDLKATMGPGIVMAQT
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggctaaaaaatcctctttcgttcatctgcataaccacaccgaattttccatgttggat
ggtatggccaaggtggatctgctttcggaagaggtgaaccggcaagaaatgcccgccgtc
ggcatgactgaccacggcaatatgtttggtgcggatgcgttttatcgtcgcatgacgtcg
aaaggcataaagccgatcattggtatcgaggcctacatggccccggaatctcgcttcaat
aaaaaccgcgtgcgttggggaaccccggatcaaaagcgtgacgacgtctcagcctcgggc
gcgtacttgcaccagacgatgctcgcggaaaatgctacgggtttgaaaaatctgtttaag
ctttcatcgctcgcatcctacgaaggccagcttggtaaatggccgcgtatggacgctgag
ctgatcgcggagcacgccgacggcatcatcgcaactactggctgtccgtcgggagatgta
cagacgcgcctgcggttggggcaatttaaccaggctttagaagccgcagccatgtggcaa
gacatctatggcaaggaaaattatttcttggagttgatggaccatgggctggacatcgaa
aagcgcaccagggatcaattgctagagatcggcaagcgcctggacttgccgccgctggtg
accaacgactgccattacgtgttgcaatcgcaagctaaagcccatgaggcaatgttgtgc
gtgcagacgggcaaaactttccaagacccggatcgtttcaagtttgatggcgacggctac
tacatcaaatctgcagcggaaatgcgtgagagctgggatcacatggttcccgatggttgc
gataacacgttatggattgccgagcgcgtcggtgattattcctccatgtgggaagaacac
tcgcatgatcgcatgccggtggcggatgtgccagaaggctatacaccgactacctggctg
caccacgaggtaatggagggcctggcagaacgtttccccggccaggaggtgcctcgtgaa
tatatcgagcgtgcggaatacgaaatcgaggtcattgatggcaaagggtatccgtcgtac
tttctgatcgtcgcggagatcattaaatatgctcgttcggtgggcatttgggtcggtccg
ggtcgtggatcagccgcgggtgcattggtggcgtatgcgttgacgattaccaatatcgac
ccgattgagcacggcctgttgttcgagcgtttcttgaacccagaacgcccgtcggcgcct
gatatcgatattgacttcgatgaccgtcggcgtggtgaaatgatcacctatgccgcagaa
cgctggggtgaggacaagatcgcgcaggtgatcaccttcggcacggtgaaaaccaagcag
gcgattaaggatgcggcgaaggtgcatttcggccaacccggtttccaaatggccgaccgc
atcaatggcgcgttgccagcgccgattatggccaaagacattccgctgtcgggaatcatg
gacccggagcacgagcgctattccgaggccaccgaggtacgtaacctcattgaatccgac
ccggacgtgaaaaagatttatgacaccgctcgcggtttggaaggcgtggtgcgccaaccg
ggcgtgcatgcctgtgcggtgattatggcttcggtgccactgatggaacacattccgatg
tggaaacgcaacgcggatggtgcgatcattaccggttgggattacccggcttgtgaggcc
atcggcctgctgaagatggactttctgggcctgcgtaacctgacggtgatcggtgatgcg
ttacgcaatatccggcaaaaccgcggcgaagaaattgatctggaaacactcatgcctgac
gacgaatcggtttccgaggtgtaccggttgctctcgcgtggcgaaaccttgggtgtgttc
cagctggactccacgggtatgcaggagctgctgaaacgcatgaacccgactgggttcaaa
gacatcgtcgccgcgcttgcgctgtatcggccaggcccaatgggtgtgaatgcccacctg
gattatgccgaccggaaaaacggacggaaaccgattaccccgatccatccggagctggcg
gagcctttggaagagatcctggcagaaacctatggtctgatcgtgtaccaggagcagatc
atgcgtatttcgcagaagctcgcgaactataccgctggtgaggcggatggtttccgaaaa
gcgatgggtaagaagaaaccggaagtgttagcccagcaatacgagaagttctctgcgggc
atggcagaaaatggctattccaaggaagcttgcgataccttgtggggcgttatcgagccg
tttgcgtcctatgcgttcaacaaatcgcacgcggcgggctacgggttggtgtctttctgg
accgggtacctgaaggcctattacaccgcggaatatatggccgccttgctgacctcggtg
ggagataaaaaagataagtctgcgatctatctggctgactgccggcacctgggcatcaag
gtgatgccgccagatgtcaacgagtcggatgtcgagttcatggctgtcggcaaagacatt
cgttacggcatgggggctgtgcgcaacgtcggtactgaagtagtcaattcgattattaaa
acgcgcaagcaaaaaggtgcctaccgttcgttcggcgattacctagacaagatcgaattg
ctgccgtgctcaaagcggattacggaagccttgattaaagccggcgctttcgattcgctg
gggcatccgcgcaagggtctgatgctgatccaagaagatgccgtcgactcggtgcaatca
acgaagaaggccgcggataagggccaattcgacttgtttgccggcatgggcggtgatgat
tccgaacaaaacgcattcaccatcactgttccagatgaatcctgggagcggaaacacgaa
ttggctcttgaacgcgaaatgctcggactgtatgtttctggccacccactggacggatac
gaacaagcgttggcttcgtatatcgataccgcactgacgacggtggtttcaggtgagtta
aagccgaagcaaaacgtggtgatcggcggcattatttcgaacgtagaccggcgcttttcc
aaaaaggatggttcgccttgggcgatcgtcaccattgaggatcatcatggcgcgcaggtc
gacgtctgggtcttcagcaaggcttattcgctggtggccgaagatattgtggaagataat
atcgtgctgttcaaagcccagatccaagtctggggtgacggcgatcagaaggttattggt
agtgacatgcgcgttcccgagctagggcgtggtgggggagcagggctgccgttgcgtttg
catttgacgacgcaacagtgctcgatggaagccatcgccgcgctgaaatccgtgttattg
gaccacccaggcgatacagaagtctacctaacccttagccacggcgaggctgaagaagta
ctcgtgctcggtgatcatctgacggtcgatcgttcgaatagcttgatgggcgacctgaaa
gccacgatggggccgggcatcgtcatggcgcagacctaa
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