Corynebacterium pseudodiphtheriticum: L9H27_08985
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Entry
L9H27_08985 CDS
T08839
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
cpsp
Corynebacterium pseudodiphtheriticum
Pathway
cpsp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpsp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L9H27_08985
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpsp03400
]
L9H27_08985
DNA repair and recombination proteins [BR:
cpsp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L9H27_08985
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L9H27_08985
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
AAA_21
DnaJ_CXXCXGXG
SMC_N
AAA_29
nSTAND1
RsgA_GTPase
AAA_25
Anti-TRAP
AAA_33
AAA_16
AAA_22
NACHT
NB-ARC
DUF5351
Motif
Other DBs
NCBI-ProteinID:
UQV57270
LinkDB
All DBs
Position
complement(1981238..1983856)
Genome browser
AA seq
872 aa
AA seq
DB search
MQVPTCVSIHDAHLHNLRHIDVTIPHGQLVAFTGISGSGKSSLAFGTIHGEGQRSYLESV
APFARRLISQATDPQVGSIEGLSPTVALQQQTTAPGARSTVGTISSTSNIVRLLYSRCGD
YSALSDGALSGDAPFNAARSDGAPSDGAPDGSAPDGSAPSETPITRLASDAFSPNTADGM
CPECRGTGTKFVATEESMVHEPQLSIRDGAITAWPGAWAGKNFRDILEALGYDLDRPWQE
LSEPDRNWILFTRERPVVEIVPHRGADQIQRTYQGTWRSVAEYLYKTLRETESDSLRRRT
ESFLESHTCSNCGGAGLRPQALQVRYLGVAINELNAWSLDFLHQELVERQQELGQRAGGS
NAARDDHSDTAAAPATRTAQDDAEALLLTQIIPPLAAALELGLGHLSLDRAATTLSAGEL
QRLRLASQLHSSLFGVTYILDEPTAGLHPQERTAVLTVIRRLLAAGNNVFVVEHDMDFVA
QADYLIDIGPYAGDGGGTVVFAGKPSELVDDRIGANGQSAEYPTARALANRHLQLADAPR
EANGHLVLRGINHRNLQGLDLELGLGQFTAVAGVSGSGKSTLVTDVVGKRATEHPDISRV
VTITQKPIGRTPRSTLATYTGMFDRVRSIFAAQARRDGNDAKKWNASKFSYNTKKGQCPE
CSGAGHIEVELVFLPGTYTLCPRCQGGRFNDEALEVRWHGRTVADVLRLRVSEALEVFRD
LADGGSKDPDHSQITQVVRALEVLDELGLGYLRLGQGAPELSGGEAQRIKLATELQRTQK
KSSVYLLDEPTMGLHPYDSAKLLDKLEALADAGATVVMVEHNLEALARVDRVIELGPGAG
AAGGRILAQASPKKLAEEDTATGRELARRVGP
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtcccgacctgcgtgagcatccatgatgcgcacctgcacaatttgcgccacatt
gacgtgaccatcccgcacggccagctggtggcgtttaccggtattagtggctcgggtaaa
tcctcgttggcgttcggcacgatccatggggaaggccagcgtagttacctggaatcggtg
gcaccgtttgcgcgccgcttgatcagccaggcgaccgatccgcaggtcggttccattgag
gggctatcgccgacggttgcgcttcagcaacagactacggcgcctggggcccgctcgacg
gtgggcacgattagctctacatcgaatattgttcgtctgttgtattcccggtgtggcgat
tacagcgcactgtctgacggcgctctgtctggcgatgctccgtttaacgccgcaaggtcc
gacggtgccccgtctgacggcgccccggatggtagcgccccggatggtagcgccccgtct
gaaaccccaatcacccgcctggcttcggatgccttcagcccgaatacggccgatggcatg
tgcccggaatgccgtggaacgggcacgaagtttgtcgccacggaagagtccatggtgcac
gaaccgcagttgtcgatccgcgacggtgcgatcaccgcgtggccgggtgcctgggctggg
aaaaatttccgcgacatcctggaggccctgggctatgacctcgaccgcccatggcaggaa
ctttccgagcccgaccgcaactggatcctgtttacccgcgagcgccccgtcgtcgagatc
gtcccgcaccgcggcgccgaccagatccaacgcacctatcagggcacgtggcgtagcgtg
gcggagtatttgtataagacactgcgggaaacggaatcggattcgctgcgacgtcgcacg
gagtctttcctggaatcgcatacctgcagcaattgcggtggcgcggggctacggccgcag
gcgctgcaagtgcgctatttgggtgttgcgattaatgagctgaatgcgtggtccttggac
tttctgcaccaggagttggtggaacgccagcaggagcttggccagcgtgccggcggcagc
aacgccgcccgtgatgaccattccgacactgctgcggccccggccacccgtactgcccaa
gatgatgccgaggccttgttattaactcagattatccctccgctggctgctgcactggag
cttggcctggggcacttgagcctggaccgagccgcaaccacattgtctgccggggagctg
caacgtctacgcctggcttcgcagttgcacagttccttgtttggcgtgacctatattctc
gacgaacccaccgcggggctgcatccgcaggaacgcacggctgtgctcacggtgatccgt
cgcctgttggccgcgggaaataacgtgttcgtcgttgagcatgacatggatttcgtggcc
caggccgattacctcatcgacattggcccttatgccggcgatggtggagggaccgtggta
tttgcgggtaaaccaagtgagcttgtcgacgaccgtatcggcgccaatggtcagtcagcc
gaataccccacagctcgcgcgctggcaaaccgccacttgcagcttgccgacgccccgcgc
gaggctaacggccacttggtgctgcgggggatcaaccaccgaaacctgcaagggcttgac
ctggagctcggcttgggccagttcaccgcggtggcaggggtatctggttcgggcaaatcg
acgctggtgacagacgtcgtcggcaagcgcgcaactgagcacccggatattagtcgcgtc
gtcacgattacgcagaaacccatcgggcgcactccgcgttccaccctggcgacgtatacc
ggaatgtttgaccgtgtccgcagcattttcgctgcccaggcgcgccgggatggcaacgat
gcgaagaagtggaacgcctcgaagttttcctataacacgaaaaagggccagtgcccggag
tgctcgggggctggccacattgaggtcgagttggtgttcctgcccgggacctatacgttg
tgcccgcggtgccagggcggccggtttaacgacgaggcgctggaggttcgttggcatggg
cgcacggtcgctgatgttttgcggttgcgggtttcggaagcgttggaggttttccgggac
cttgccgacggcggcagtaaggatcccgaccattcccagatcacccaggtggtgcgggct
ctagaggttttggatgaacttggcctgggctacctccgcttggggcagggtgcgccggag
ttgtctggtggtgaggcccagcgcatcaagttggcgacggagctgcagcggacgcagaag
aaatccagtgtgtatctgctcgatgagccaaccatggggctgcacccgtacgatagcgcg
aagttgttggataaattggaagcacttgccgacgccggtgccaccgtcgtcatggtggag
cacaacttggaggcgctggctcgtgtggatcgtgtgattgagcttggccctggggcggga
gctgctggaggtcgcatcctagcgcaggcgagccctaagaagttggcggaagaagatact
gctacggggcgggaattggcccggcgggtggggccgtaa
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