Cytobacillus pseudoceanisediminis: M5V91_03120
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Entry
M5V91_03120 CDS
T09231
Symbol
fdhF
Name
(GenBank) formate dehydrogenase subunit alpha
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
cpss
Cytobacillus pseudoceanisediminis
Pathway
cpss00630
Glyoxylate and dicarboxylate metabolism
cpss00680
Methane metabolism
cpss01100
Metabolic pathways
cpss01120
Microbial metabolism in diverse environments
cpss01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
cpss00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
M5V91_03120 (fdhF)
09102 Energy metabolism
00680 Methane metabolism
M5V91_03120 (fdhF)
Enzymes [BR:
cpss01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
M5V91_03120 (fdhF)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Molybdop_Fe4S4
Fer2_4
Fer4
Fer4_7
NADH-G_4Fe-4S_3
Fer4_21
Fer4_10
Fer4_8
Fer4_6
Fer4_2
Fer2
Fer4_9
Fer4_15
Fer2_3
Fer4_18
Fer4_NDSU1
PMT_C3
Motif
Other DBs
NCBI-ProteinID:
UQX54813
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Position
574610..577576
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AA seq
988 aa
AA seq
DB search
MIELPASLNIKINGIEMKAKQDQTVLQLLNDSSIEIPQVCFHPSLGAIETCDTCIVSVNG
ELVRSCSTKIKDGDVIDTVDPDVKQAQTIAMDKILFNHELYCTVCDYNNGGCEIHNTVKA
MKINHQSIPFDQKPYEKDESHPFYRYDPDQCILCGRCVEACQDVQVTETLTIDWERERPR
VIWDNDVPINESSCVSCGHCSTVCPCNAMMEKGMEGEAGFLTGIAKDTLRPMIEITKNVE
TGYGSILAISDMEAAMREEKIKKTKTVCTYCGVGCSFDVWTKGREILKVEPQAEAPANGI
STCVKGKFGWDFVNSEERLTKPLIREGDSFREAEWDEALELITRKFSEIKEQHGPDALSF
ITSSKCTNEESYLMQKLGRAVIGTNNIDNCSRYCQTPATVGLFRTVGYGGDAGSIEDIKN
SELVLIIGSNTSESHPVLSTRVKRSQKLNGQKVIVADLREHEMAERSDLFVRPRAGTDMV
WLSAITKYIIDQGWADEKFLQEKVNGLEEFVSNLEKYTLEFAEETTGISKDNLIKMAKMI
HEANSVSALWAMGVTQHLGGSDTSTAISNLLLVTGNYAKPGAGAYPLRGHNNVQGAGDFG
SSPDNLPGYQKVSDPDVRKKFEDAWGVKLPEKAGLNNHEMVEGIHEGQLKAMYLKGEDMG
LVDSNINYVQAAFEKLDFFVVQDIFLSRTAEFADVVLPASPSLEKEGTFTNTERRIQRLY
QAFEPLGDSKPDWQIIIEVANRLGAGWTYTHPSEVMDEAAGLMPLYAGVTYDRLEGYNSL
QWPVAEDGTDSPLLYTEGFPFPDGKARLFPVDWTPALEYPMEYDIHVNNGRLLEHFHEGN
MTYKSKGISLKTPEVFLEVSPELAEERGLKDGTLVRLTSPYGNVKVKCHITDRVKGKEVY
LPMNDRGEAAINLLTSSYADKDTDTPAYKETKVKLEILSEEGSNPLPRINHRYGNPQPQI
GVNVQKKWARKDYIFPGEMVKKERKQHG
NT seq
2967 nt
NT seq
+upstream
nt +downstream
nt
atgattgagttgccagcatctctcaatataaagataaatggtatagaaatgaaggcaaag
caggatcaaaccgttttgcaattattaaacgatagttcgattgaaattcctcaggtttgc
ttccatccgagccttggagcaatagagacctgtgatacctgcattgtttctgtcaatgga
gaacttgtacgttcgtgctccacaaaaattaaagatggagacgtaattgatactgtggat
cctgatgtaaaacaggcgcagaccattgccatggataagattctctttaatcatgaattg
tattgtacggtttgtgattataacaacgggggatgtgaaatacataatacggttaaggcg
atgaaaatcaatcaccaaagcatcccgtttgatcaaaaaccttatgaaaaggatgaatct
catccattttacagatacgatcccgatcagtgcattctttgcggaagatgtgtggaagcc
tgtcaggacgtccaggttactgaaacccttaccattgattgggagcgggagagaccaagg
gttatctgggataacgatgtgcccattaacgagtcctcctgcgtatcctgtggacactgt
tctacggtttgtccatgtaatgccatgatggaaaaaggaatggagggggaagccggattt
ctgactggaattgccaaagacactcttcgtccaatgattgaaatcactaaaaatgttgaa
acaggatatgggtccattctggctatatctgatatggaagcagctatgcgggaagagaaa
attaaaaagaccaaaacagtctgtacatattgcggtgtcggctgcagctttgatgtatgg
acaaagggccgtgaaatactgaaggtggagcctcaggcagaagcacctgccaatggaatt
tctacatgtgtaaaagggaaatttggctgggactttgtgaatagtgaggaacgattaacg
aagccgctaatcagggaaggcgattcattccgtgaagcagaatgggacgaagcattggaa
ctgattacacgaaaattctcggaaattaaagaacagcatggcccagatgcattgagcttt
attacatcatctaaatgtaccaatgaggaatcgtatttaatgcagaaacttggcagggca
gtcatagggacaaataatatcgataactgttcaagatattgccagacccctgcaactgta
gggttatttcgaactgtgggatatggaggggatgctggttcaatcgaagatattaaaaac
tctgaattagtgctgattattggttccaatacgtctgaatcccatccggttctttctacc
agggtgaaacgatcccagaagcttaacggccaaaaagtaattgtggctgacttaagggaa
catgaaatggcagagcggtctgatctgtttgtgcgtcctcgtgcaggtacggatatggtc
tggctttctgccattaccaaatacattatcgaccagggatgggcggatgagaagtttctg
caggaaaaagtaaatggacttgaagaatttgtatcaaacctggagaaatatacgctggaa
tttgcagaagaaacgaccgggatttccaaagacaatttaatcaaaatggcgaaaatgatt
catgaagccaatagtgtttccgctttatgggcaatgggtgtcacacagcatcttggaggc
agtgatacaagtacagccatatcaaatctgcttcttgtaacaggaaattacgctaaacct
ggtgcaggtgcgtatcctttaaggggccacaacaatgtgcagggggcaggtgattttgga
agcagccccgataatttgcctgggtatcagaaggtttcagaccctgatgtgagaaagaag
tttgaagatgcatggggagtaaagcttccggaaaaggccggactgaataatcacgaaatg
gtagaagggattcatgaaggccagctgaaagcgatgtatctgaagggtgaagatatggga
cttgtggattcaaatattaattatgtgcaggctgcttttgagaagcttgatttctttgtg
gtacaggacattttcctttcccgtacagctgagtttgcggatgtggtgcttcctgcaagt
ccaagtttggaaaaggaaggaacatttactaacacagagaggagaattcagcgtctttac
caggcgttcgagccgcttggggattcgaagccggattggcagattatcattgaagttgca
aatcggctgggagcaggctggacatatacgcacccaagcgaagtaatggacgaggcagct
ggacttatgccattatacgcaggagttacttatgatagattggaaggatacaatagtctg
caatggcccgtggctgaagatggaacagacagtcctctcctctatacggaaggctttcct
tttccggatggcaaggcaagactttttccggtagattggactcctgctcttgaataccca
atggaatatgatattcatgtcaataatgggcgtcttctggagcacttccatgaaggtaat
atgacctataagtcaaaaggaatcagcttgaaaacaccggaagttttcctggaggtatca
cctgaactagccgaagaacgagggttgaaggatggtacacttgttcgtttgacatcgcca
tatggcaatgtgaaagtaaagtgccatataacggatagggttaaaggaaaggaagtttac
cttcctatgaatgataggggcgaagccgccataaatttattaacaagcagctatgccgac
aaggataccgatacaccggcatataaggaaacgaaggtaaagcttgaaatcctgagtgaa
gaaggaagcaacccgcttccaagaattaatcaccgctatggcaatccgcagccgcagata
ggtgtaaacgtgcaaaagaaatgggcaagaaaagattatattttcccgggagaaatggtg
aaaaaggagcgaaagcagcatggctaa
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