Cytobacillus pseudoceanisediminis: M5V91_09540
Help
Entry
M5V91_09540 CDS
T09231
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
cpss
Cytobacillus pseudoceanisediminis
Pathway
cpss03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpss00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
M5V91_09540
09124 Replication and repair
03420 Nucleotide excision repair
M5V91_09540
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpss03021
]
M5V91_09540
03036 Chromosome and associated proteins [BR:
cpss03036
]
M5V91_09540
03400 DNA repair and recombination proteins [BR:
cpss03400
]
M5V91_09540
Enzymes [BR:
cpss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
M5V91_09540
Transcription machinery [BR:
cpss03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
M5V91_09540
Chromosome and associated proteins [BR:
cpss03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
M5V91_09540
DNA repair and recombination proteins [BR:
cpss03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
M5V91_09540
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
Helicase_C
PhoH
Motif
Other DBs
NCBI-ProteinID:
UQX55857
LinkDB
All DBs
Position
complement(1807357..1809648)
Genome browser
AA seq
763 aa
AA seq
DB search
MDNKIKISVRSLVEYVYKSGSIETGFRSAVPLSEGTRIHQRIQKLYGEEDQKEVYLHTVL
TFNHLDFQLEGRCDGLFIRNEEHIIDEIKSVSLPLSEIDEFAYPVHWAQAKCYAFMYAKD
HNLPDMTVQLTYVQSKTDEVKRFQQSYSLRELEEFILYLLESYFPYADWKIQHQQALTKS
IQELAFPFPAYRNGQRRFAGAVYKTIAEGKNLFANAPTGIGKTISTLFPALKAIGEGHIQ
RIIYATAKTITRQAAEGAIAMMGDDGLNLKSVTITAKDKICFKEETNCQKDNCEFANGYY
DRINQAVLDLLKNENMISRTAIEQYAKKHKVCPFEFSLDAAYAADAIIGDYNYIFDPRVS
LKRLLEEEKKKTALLIDEAHNLVDRGREMYSSSLEKSAFLQLSRSFKGKDEGIQKSAKQV
NGIFIALKKKCGENQEIAEKNPPEELFEILEEFVQYSENYLGQNRNNTEEELLEVFFAAQ
NFIRIGKLYDDRFVTYIQKERNDLIIKLFCLDPSSLLHKARKGYKSAIFFSATLMPLNYY
LDMLCFQEEDFIVSVPSPFSKDQAKVYIQPLSTRYRDREGSIEPIVRTIKSMLKGQKGNY
LIFFPSYQYMEIVYGRFLNEEMPVHAIIQKTGMDEREREEFLDAFQPNASGTLLGFAVMG
GIFSEGIDLQGDRLNGVFVVGVGLPQIGFERDMMKAYFQQQGKNGYDYAYTYPGMNKVLQ
AGGRLIRSENDTGMIVLMDDRYLQAKYQTLLPDEWKDSILLRS
NT seq
2292 nt
NT seq
+upstream
nt +downstream
nt
atggataataagataaaaatatcggttagatcgttagttgaatatgtttataaaagcggc
agcattgaaacaggcttccgttctgcagtgccgctttcagaaggaacaaggattcatcaa
agaatccaaaaactttatggggaagaagaccaaaaagaagtgtatctgcacacagtctta
accttcaatcacctagactttcagcttgagggcaggtgtgacgggcttttcatcagaaat
gaagaacacattatcgatgaaattaagtctgtttccctcccgctatctgaaatagatgaa
tttgcatatccagtccattgggctcaggctaaatgctatgctttcatgtatgcaaaagat
cataatcttccagacatgacagttcaattaacctatgtacaatctaaaacagatgaagtg
aaaagatttcagcaaagctattctttacgtgaacttgaagaatttatactttaccttctg
gaatcctattttccatacgccgactggaagattcagcatcaacaggcattaacaaagagc
atacaagaattggcttttccttttcctgcctaccgaaatggccagagaagatttgccggg
gcagtatacaaaaccattgcagaggggaaaaacttatttgccaacgcacctacaggcatc
ggcaaaacaatttccactctttttccagcattaaaagccattggggaaggccatattcag
aggatcatttatgccacagccaaaaccattacccgtcaggctgctgaaggggccatagcc
atgatgggggatgatggattgaatcttaaatcggtcacaatcacagctaaagacaaaatt
tgctttaaggaagaaaccaattgccaaaaagacaactgtgagtttgccaatggatattac
gaccggatcaaccaggccgtacttgacctcctgaagaatgagaacatgataagcagaacg
gcaattgaacaatatgctaagaagcataaagtctgcccttttgaattttcattggatgcc
gcatatgccgctgacgccattattggtgattataactatattttcgatccgagggtctca
cttaagcgattactggaagaggagaaaaagaaaacggctctattgatcgatgaagctcat
aacctggtggaccgcggaagggaaatgtattcaagttccctggagaaatcagcctttctt
cagttgagcagaagctttaaggggaaggatgaagggattcaaaaaagcgcaaaacaggtt
aatggaatttttattgcattaaaaaagaaatgtggtgaaaatcaggaaatcgcagaaaaa
aatcccccagaagaactttttgagattcttgaagaatttgttcaatactccgaaaactac
ctggggcaaaacagaaacaatacggaagaagaattgctggaagtattctttgctgcccag
aatttcatcagaataggaaaactgtatgatgacaggtttgtaacgtatattcaaaaggag
aggaatgacctgatcatcaagttattttgcctggatccttcgagtcttctgcacaaggcc
agaaaaggatataaatcggctatctttttttccgctaccttaatgcctcttaactattat
ctggacatgctttgctttcaagaggaagatttcattgtatccgttccttcccctttctcc
aaagatcaggctaaggtctacatacagccgctttccaccagatatcgtgaccgggaagga
tctatcgaaccgattgtcagaacaatcaagagcatgctaaagggacagaaggggaattac
ttaatcttctttccatcctatcaatatatggaaattgtttatggaaggttcctcaatgag
gaaatgccagtacatgcaattattcaaaagacaggaatggatgaaagagaaagggaggag
tttctggatgcatttcagccaaatgcttctggtactctgttggggttcgccgtcatgggc
gggattttttcagaaggaattgatttgcagggagataggctgaatggtgtatttgtggtt
ggtgtgggtcttccccagatcgggtttgaacgtgatatgatgaaagcttatttccagcag
caagggaaaaacggctatgattatgcctatacttatcctggaatgaacaaagttcttcag
gcagggggcaggcttattcgttctgaaaacgatacagggatgattgtcttaatggatgac
aggtatttacaggcaaagtatcagaccctgctgcctgatgaatggaaggattctattttg
ttaagaagttaa
DBGET
integrated database retrieval system
