Cytobacillus pseudoceanisediminis: M5V91_09745
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Entry
M5V91_09745 CDS
T09231
Name
(GenBank) exonuclease SbcCD subunit D
KO
K03547
DNA repair protein SbcD/Mre11
Organism
cpss
Cytobacillus pseudoceanisediminis
Brite
KEGG Orthology (KO) [BR:
cpss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpss03400
]
M5V91_09745
DNA repair and recombination proteins [BR:
cpss03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M5V91_09745
Archaeal homologous recombinant proteins
M5V91_09745
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Epimerase_2
DNA_pol_E_B
Motif
Other DBs
NCBI-ProteinID:
UQX55890
LinkDB
All DBs
Position
complement(1846057..1847199)
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AA seq
380 aa
AA seq
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MKFIHTADWHLGKLVHGVYMTGDQRHFLHQFIDVVEEEKPDAVVIAGDLYDRSVPPTDAV
ELLNEILFKINVELNTPVVAIGGNHDSAERLSFGSSWYKQSKFYLSGKLVNDFRPIHING
VNFYLVPYAEPGMVRHLLDDDRVHSHDDAMKAIVNRIEEYLNPNEPNVLVGHAFVLGGAT
SDSERTLSVGGSGCVHSSSFDPFSYTALGHLHSPDAIKHDKIRYSGSLLKYSFSEAKQEK
SISIIEMKENGEFDLRTRSLKPKKDLREIEGHLDELMDPAFYEKQNLDDYLKITLFDEGA
LLDPINKLRQVYPNVLHLERRIAVTDMKKSSFLSMKEEKKSELDLFKQFYEQMTTSEFTE
DKQQVMTNVIEKVLREEALK
NT seq
1143 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttatccataccgctgattggcatttgggcaagctggtccatggtgtatatatg
accggagatcagcgtcattttttgcatcaatttattgatgtggtagaggaagaaaagccg
gatgcagtcgttattgcaggagacttatatgaccgttccgtacctccgactgatgctgta
gaattgctgaatgaaatcctttttaaaataaatgtagagctcaatacacctgtggttgcc
ataggaggaaaccatgacagcgctgaaaggctgtcctttggtagctcctggtacaaacaa
agcaagttctacctgtctggaaaactggtaaatgattttaggcccatacatattaatggt
gtgaacttttatctggttccgtatgctgaacccggaatggtcaggcatttgcttgatgac
gaccgtgtgcattcccatgatgatgcaatgaaggcaattgtgaacagaattgaagagtac
ctgaatccaaatgaaccgaacgttcttgtcggacatgcttttgttttgggcggtgctacc
agtgattcggagaggaccctctctgtcggaggatcaggctgtgtccattccagcagcttt
gatcctttctcctatacggcacttggtcatttgcatagtcctgatgccataaagcatgac
aagatccgctattcaggctccctattaaaatattctttttccgaagctaaacaggaaaaa
tccatttctattatagaaatgaaggagaatggtgaatttgacttgcgtactcgttcatta
aagcctaaaaaagacttgagagagatcgaagggcatctggatgaactgatggatccagct
ttctatgaaaaacagaaccttgatgactatctgaaaatcaccctttttgatgaaggcgca
ttgcttgatccgattaataagctgagacaggtctacccaaatgttcttcaccttgaaaga
aggatagccgttacagatatgaaaaaaagctccttcctttcgatgaaggaagagaaaaag
tcggagcttgatctgtttaaacaattctatgaacaaatgaccacttccgaatttacagaa
gataaacagcaggttatgaccaatgtgatcgaaaaagtgctaagggaggaggcgctgaaa
tga
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