Cytobacillus pseudoceanisediminis: M5V91_10130
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Entry
M5V91_10130 CDS
T09231
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K20480
HTH-type transcriptional regulator, quorum sensing regulator NprR
Organism
cpss
Cytobacillus pseudoceanisediminis
Pathway
cpss02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
cpss00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
M5V91_10130
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpss03000
]
M5V91_10130
Transcription factors [BR:
cpss03000
]
Prokaryotic type
Helix-turn-helix
Other families
M5V91_10130
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HTH_3
TPR_10
HTH_31
RapH_N
TPR_2
TPR_12
TPR_1
Motif
Other DBs
NCBI-ProteinID:
UQX55955
LinkDB
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Position
complement(1919459..1920706)
Genome browser
AA seq
415 aa
AA seq
DB search
MIIGKIIKFYREREGLTQGQLGEGICSVTHLSKIERGITEYSGEITHLLARRLGINPEEE
ILRYHQLAKRLDEWHESMIMQRIQESKQIKKELQVEKLIHMPDFQTLYGLLSARFYLSVS
DLESASKLISDLNKASAAFSPHDANLLKHIQGIYYFLTGQYRDCISCLASIDRDQYNYDE
YYYHLAIAYHSIHSNITAYYYGKKALQYFQRTLNILRIIDTEMLLIVQLNAKELHDFNET
KEKYEQLIKLCDACNSGDRKSKLYHNLAFEYFRRKKYRESAGLYEEALKLTAENAPHYLT
ALDGYIHTCYKGKLQAGSALIKLAEEGMERAKAADSFTWIYFQLHLYLLKKEEQQYYQFI
EETALPYFKKIGYGILIDHYEKKLFHFYSEIGEAQKAIELARSFIQKQKSYYDHE
NT seq
1248 nt
NT seq
+upstream
nt +downstream
nt
atgatcattgggaaaataattaagttttacagggaacgagaaggcctaactcagggtcag
ctgggagaagggatttgttcagtaacccatttaagtaaaattgaaagggggattaccgaa
tactccggggaaattacacacctcctggccaggaggctcggcattaatcccgaagaagaa
atacttcgatatcatcagcttgcaaagaggctggatgaatggcatgagagcatgatcatg
cagcgaatacaggaatcaaaacagataaaaaaggagctgcaggttgaaaaactgattcat
atgccagattttcagactctatatgggcttctgtcagcaaggttctatttatctgtgagt
gatttggagtcagcctcaaaattaatctcggatcttaataaagcttccgctgccttttcg
cctcatgatgcgaatctgttgaaacatatccagggcatctattactttcttacaggtcaa
taccgtgactgcatcagctgtttagcttccattgacagagatcagtacaactatgatgaa
tactattaccacctagcgattgcttaccattccatccattcaaatattacagcctattat
tacgggaaaaaggctcttcaatattttcaaagaaccttaaatattctccgcattatagac
acagaaatgctgctgattgttcagctaaatgccaaagaactacatgattttaatgaaaca
aaggaaaaatatgaacagttaattaagttatgtgatgcgtgtaattcaggtgaccggaaa
tccaagctttatcataatctggcattcgaatattttcgccgaaagaaatacagggaatca
gcaggcctttatgaagaagcacttaagcttactgccgaaaatgctcctcactatttaact
gctttagatggttacattcatacctgttataaaggaaaacttcaggccggcagtgcgcta
ataaaattagctgaagagggcatggagagggcaaaagcagctgattcatttacctggatt
tactttcagcttcatctctatctattgaaaaaagaagaacagcaatactatcaatttatt
gaggaaacagctttgccgtactttaagaaaattggctatggcattttaatcgaccattat
gagaaaaagcttttccatttttattcagaaataggtgaggcacaaaaagcaattgagctc
gcccgttcttttatacagaaacaaaaaagctattatgatcacgagtaa
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