Cytobacillus pseudoceanisediminis: M5V91_13560
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Entry
M5V91_13560 CDS
T09231
Name
(GenBank) exonuclease domain-containing protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cpss
Cytobacillus pseudoceanisediminis
Pathway
cpss03030
DNA replication
cpss03430
Mismatch repair
cpss03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
M5V91_13560
03430 Mismatch repair
M5V91_13560
03440 Homologous recombination
M5V91_13560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpss03032
]
M5V91_13560
03400 DNA repair and recombination proteins [BR:
cpss03400
]
M5V91_13560
Enzymes [BR:
cpss01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
M5V91_13560
DNA replication proteins [BR:
cpss03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
M5V91_13560
DNA repair and recombination proteins [BR:
cpss03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
M5V91_13560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
UQX56498
LinkDB
All DBs
Position
complement(2566192..2566920)
Genome browser
AA seq
242 aa
AA seq
DB search
MGFYPFVQFVRGIQGKLQTNMFGGMNGQNPQQMAFIRQMQRELENTDSMAIPFGNLNVAV
FDIETTGFYPDKGDQIISIGAVKIIKGKVSEDSFYSLARFEKPLSNEIKELTGLSEADLE
KAPPLSEVLISFLEFVKDMPLVAHHANHEKSFMQHSCWKLFRTPFKYRILDTSFLYRIAD
HNKSFWRLEDLCEFYSIPVKDRHHALGDAKLTALLWCRLIEEVHKLGCSNLKEVYERIAR
FS
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgggattctatccttttgtccaatttgtcagaggtattcaaggaaaacttcaaactaat
atgtttggtgggatgaatggtcaaaatccacagcaaatggcatttataaggcaaatgcag
agggaattggagaataccgattcaatggctattccattcggaaatttgaatgtggctgtc
tttgatattgaaacaactgggttttatccggataaaggggatcagattatatcgattggt
gcggttaaaattattaaagggaaagtcagtgaagacagtttttattcactcgcccgattt
gaaaagccactttcaaacgaaattaaggagctgacgggtttatctgaggctgatttagaa
aaagcccctcctctctcggaagtattgattagtttccttgaatttgtaaaggatatgccg
cttgtggcccatcatgcgaaccacgagaaaagctttatgcagcacagctgctggaagcta
ttccgtacgccattcaagtataggatattagatacttccttcctttacaggatagctgat
cataataaatcattctggagattagaagacctttgtgaattttatagcatccctgttaaa
gaccgccatcatgccctgggagatgcaaagcttactgctctcttatggtgccgtttgatc
gaggaggttcataaattaggatgctccaacttaaaagaggtttacgagcgaatagccagg
tttagctaa
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