Cytobacillus pseudoceanisediminis: M5V91_14270
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Entry
M5V91_14270 CDS
T09231
Symbol
addA
Name
(GenBank) helicase-exonuclease AddAB subunit AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
cpss
Cytobacillus pseudoceanisediminis
Brite
KEGG Orthology (KO) [BR:
cpss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpss03400
]
M5V91_14270 (addA)
Enzymes [BR:
cpss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M5V91_14270 (addA)
DNA repair and recombination proteins [BR:
cpss03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
M5V91_14270 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
DEAD
AAA_12
AAA_22
Motif
Other DBs
NCBI-ProteinID:
UQX52241
LinkDB
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Position
complement(2696993..2700751)
Genome browser
AA seq
1252 aa
AA seq
DB search
MKMAIPPKPEDATWTDDQWKAIMAKGQDILVAAAAGSGKTAVLVERIINKIIADEDLINV
DELLVVTFTNASAAEMRHRIGEALEKAINADPKSAHLRKQVSLLNRASISTLHSFCLEMI
RKYYYMTDIDPGFRIADETEAQLLRDEVLEELFEEEYGKEGNEAFFALVDTFTNDRSDTA
LQDIIRDLYDFARSNPSPDQYLDSIVEMYNVDGVESLEKLPFVRSLLEDIDLQLKGARQL
LEYGLELTKLPGGPAPRAENFIADLHVVNTLIEAKNDSWPMLYEAMQSWSFGRAKTCKGN
DYDEGLVEKAKKLRDQAKKIITGLQEELFFRKQESFMRDMAEMKPHIESLVSLVKEFSIR
FDQVKTEKGLVDFADLEHYCLEILSSSDEEGRLLPSEAALACRNQFKEVLVDEYQDTNMV
QEAILQLVTADSEENGNLFMVGDVKQSIYRFRLAEPNLFLSKYTRFGRDGEETGLRIDLA
RNFRSRKEVLHGTNYIFKQIMGTSVGEIEYDQAAELIKGAPYSESQEHPVEIAIIDLEGN
EKNEPEPESMDEGFDSEELAQSQLEARFMASKIKEIIGNRKEVYNTKTESGRPAKYRDIV
ILLRSMTWAPQIMEEFKQQGIPVYANLSSGYFEATEVAIMMSLLKVIDNPYQDIPLASVL
RSPILGLTEEELAQIRIHNKRGSFYEALTSFCRNDPTLETEELYEKVRPFFDQLKDWRVM
ARQGSLSELIWHLYRETRFYDFVGGMPGGKQRQANLRALYDRARQYEATSFRGLFRFLRF
IERMRDRGDDLGAARALGEQEDVVRLMTIHSSKGLEFPFVFIAGLARNFNTMDLKKPYLL
DKEFGFAAKYVNAEKRISYPSLPQIAFKRKKKMEMLAEEMRVLYVALTRAKEKLFLVSSV
KSADKKLNQWLQASEHKEWLLNEYDRASANSYLDWIGPSLVRHRDCEALRGEGPVHPLVP
AEILEHPSCWNITIIKSEEAAVLSEEANEGETDLLQLVYEGKPVPAESAYKDKVEEQLSW
KYSFKQAAQARSKQSVSEVKRQREIFSEEDSGTELIRKINKPLLGRPRFMQEKSLSPAER
GTAMHAVMQHIDFSRPATVETISSKMAEMLQNELLTEEQHASIEPQLIVQFFETKLGQRI
VQAKSVRREIPFSLSFPAREIYSDWKGEDETVLIQGIVDCVIEDEQGLVLLDYKTDGISG
RFKGGFAEAKPVLENRYKVQIDMYTRALEQILKREVNERYLFFFDGAHTLKL
NT seq
3759 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatggccataccgcctaagccggaagatgcaacctggactgatgaccagtggaaa
gcaattatggccaagggacaggatattctggtggctgctgcagccggttcagggaaaacg
gctgttttggttgaaaggattatcaataagattatcgctgatgaagatcttattaatgtc
gatgaactccttgttgtgaccttcacaaatgcctcagctgccgaaatgaggcacagaatc
ggcgaggcgcttgaaaaagcgattaatgccgatccgaagtctgctcacctcagaaagcag
gtaagcttattaaacagggcatccatctcgactttgcattcattttgcttagagatgatc
cgtaaatattactacatgaccgatattgatcccggatttcgaatcgctgatgaaacagaa
gcacagctcttaagggatgaagtactcgaggagctttttgaagaggaatacggtaaagag
ggaaacgaagcattctttgcacttgtggatacttttacaaatgacagaagtgacactgcc
cttcaggatataataagggacttatacgattttgcccgctccaacccttcacctgatcaa
tatcttgattcaattgttgagatgtataacgtggacggtgttgaaagtcttgaaaagctt
ccatttgtccgttcccttttggaggatatagatcttcagctgaaaggggccaggcagctg
ctggaatatgggctggagctgaccaagcttcctggaggaccggctccgagagcagaaaac
tttatcgcagatctgcacgttgtcaatactctaatcgaagcgaaaaacgattcgtggccg
atgctatatgaagcgatgcaatcatggtcttttggcagagccaaaacgtgtaaaggcaat
gattatgatgaagggctggttgaaaaggcaaagaaactcagggaccaggccaagaaaatc
ataaccggcctgcaggaagaactgtttttccgcaaacaggaaagcttcatgcgtgacatg
gcggaaatgaagccccatatagaatcgcttgtttcgttagttaaagaattctcaattcgc
tttgaccaggttaaaactgaaaaagggctggttgactttgccgatcttgagcattattgc
cttgaaattctttcatcatcagatgaagagggaaggctattgccatcagaagcagctctt
gcctgcagaaatcagttcaaagaagtcctggttgatgagtatcaggataccaacatggtg
caggaagctattttgcagctggtaacagcagattcagaagaaaacgggaatcttttcatg
gtaggcgatgtaaagcagtcgatctaccgtttccgccttgcagagcctaatctgtttttg
agtaagtacacccggttcggacgggacggagaagagacaggccttagaattgatctggcg
cgaaatttcagaagccgtaaagaagtcctccacgggaccaactatatttttaagcaaatt
atggggacatctgttggtgaaattgagtatgatcaggcagctgagcttattaaaggagca
ccttattcagagagtcaggaacaccctgtggaaatagccattattgatcttgaaggaaat
gaaaaaaacgaacctgagcctgaatcaatggatgagggttttgacagcgaagagttagcc
cagtcacagctcgaagccagatttatggcgtcgaaaataaaagaaatcattgggaatcgg
aaagaagtttacaacacaaagaccgaatccgggcggcctgccaagtacagggatattgtc
atcctgcttcgttccatgacatgggctccgcaaataatggaggagttcaaacagcaggga
atccctgtttatgccaatctctccagcggctattttgaagcaacggaagtagcgattatg
atgtcacttctaaaagtgattgataatccgtatcaggatattccgctggcatcagttcta
agatctcctattttggggctgacagaagaagagcttgcacaaatcagaatccataataaa
agagggtctttctatgaagcattgacttctttttgccggaatgacccaaccctggaaaca
gaagaattatatgagaaagtgcggccgttttttgaccagcttaaagattggcgtgtgatg
gcccgccagggttcgctttccgaactgatttggcatctgtatagagaaaccagattttat
gatttcgtcggcggcatgccgggcggaaagcagaggcaggcaaaccttcgcgcattgtac
gatagagcaagacagtatgaagcaacatcattcagaggattattccgcttcttaaggttt
attgaacgaatgcgggacagaggcgatgatcttggcgctgcccgtgctttgggtgagcag
gaagatgttgtccgtcttatgacgatccacagcagcaaagggctggaatttcctttcgtt
ttcattgcagggcttgcccgcaattttaatacgatggatctgaaaaagccatacttgctt
gataaggaatttggattcgctgcaaaatatgtaaatgccgagaagagaatttcttacccc
tctttgccgcagattgcttttaaacgaaaaaagaaaatggaaatgcttgctgaagaaatg
cgggtcctatatgttgctttaacaagggcgaaggaaaagcttttcctggtatcgtccgtc
aaaagtgcagataaaaaattaaatcagtggctgcaggcatcggagcataaagagtggctc
ctgaatgagtatgacagggcttctgcaaacagttacctggactggattggtccatcgctt
gtcagacatagagattgtgaggcattgagaggagaagggccggttcatcctctcgttcct
gcagaaatacttgaacacccttcctgctggaatataaccataatcaaaagcgaagaagct
gcagttctttcagaagaagccaatgagggcgaaacggatttgctgcaattggtttatgaa
ggaaaacctgttccggctgaatcggcttataaggataaagttgaggaacagctttcctgg
aaatattcctttaagcaggctgctcaagctagatctaaacaatccgtttcggaagtgaag
cggcagcgggagattttttctgaagaagacagcggaactgaattaatccgtaaaatcaat
aaacccctgcttggcaggcctcgattcatgcaagaaaaatctctttctccagctgaacgg
ggtactgctatgcatgctgtcatgcagcatattgatttcagcaggcctgcaactgtggaa
acaatatcttccaaaatggcagagatgcttcaaaacgaattgctgacagaagagcagcat
gccagcattgaaccacagctgattgtacagtttttcgaaaccaaactgggacaaagaatc
gttcaggctaaatcggtacgaagagaaatcccattcagtctatcttttccagcccgggaa
atctattcagattggaagggagaagatgaaacggttctcatccaggggattgtggactgt
gtaattgaagatgagcagggcctggtgcttctggattataaaacggatggaatcagcggc
cggtttaagggaggctttgctgaagccaaacccgttctcgaaaacaggtacaaagttcaa
attgatatgtacaccagagcattggaacaaatattaaagagagaagtcaatgaaagatac
ctattcttctttgacggggctcatacacttaagttatag
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