Cytobacillus pseudoceanisediminis: M5V91_14275
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Entry
M5V91_14275 CDS
T09231
Symbol
addB
Name
(GenBank) helicase-exonuclease AddAB subunit AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
cpss
Cytobacillus pseudoceanisediminis
Brite
KEGG Orthology (KO) [BR:
cpss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpss03400
]
M5V91_14275 (addB)
Enzymes [BR:
cpss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M5V91_14275 (addB)
DNA repair and recombination proteins [BR:
cpss03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
M5V91_14275 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
DUF7658
RIN1
Motif
Other DBs
NCBI-ProteinID:
UQX52242
LinkDB
All DBs
Position
complement(2700729..2704235)
Genome browser
AA seq
1168 aa
AA seq
DB search
MTVRLLIGRSGSGKTEYCLNEIRDELRLNPDGDPIIYLVPEQMTFLSEYKLITTPGLGGM
IRSQVYSFTRLAWRILQETGGMSRYHLNSVGISMLIRKIIEDKKDELKLFQRAADKNGFI
QQIEQMMTEFKRYCVAPDELAERQQQLSGTGKSNKALQDKLHDLELIYKNFEESLAGKYT
DSEDYFRLLAEKASHSEYLKNAEVYIDGFYSFTSQEYSIVEQLMKQCKNVTITLTLDKQF
KHSATEELHLFRMAGENYQTIKEMASRNRLGIEEMVITEQKRWCSPSLRHLEAHFDSRPA
EAFLGEADIHIGQAVNRRAEIEGVARKINKLVRTDGYRYRDIAVLARNGQDYHDMIETVF
HDYEIPFFIDQKRTMLNHPLVELIRSTLEIINGNWRYEPIFRAVKTELIFPSKLNAGKLR
EQMDRLENYVLAYGIQGDKWTKKKRWIYRRIRGLEFEAVAQTDSEKRIEDELSDLREMIT
GPILRLHRRLKKAADGRGYCEALFLYLEELDVPVKIEKWKSAEEEKGNLVKSREHGQAWN
AIMELLDQYVEMLGEEEVTLKRFASVLDAGLESLRFTLVPPAIDQVMAADLERSRLTDIK
AAFVIGLNEGVIPAKFSEDGVLADDDREILNTNGMKLAPGSRTRLLDEEFIAYKAFVTPS
EKLFISYPLANEEGKALMPSPYIKRLGDLFPDCRQHSFMSDPAELPETEQLEYADNLNTA
LSYLTSQLQLKKRSYPIYDLWWDVYNCYLNNEHWRRPALKVLSSLNYENRTLQLGADISK
ELYGDHIQASVSRMELFHSCPFSHFAQHGLRLRERQVYRLEAPDIGDLFHAALKFIAETV
MTQKLSWTDMTREQCEILAKEAVEMLAPKLQNEILLSSNRHHYIKRKLEQIISRASYVIS
EHAKSSGFSPVGLELGFGPKGELPSLVFPLKNGTKMELVGRIDRVDKAQDTNGTFLRVID
YKSSSKDLNVSEVYYGIALQMLTYLDIIIAHSNSLIGTEADPAGVLYFHVHNPIVSTSKM
LTLEDIEQELYKKFKMNGLLLGDENVIRLMDQTIETGDSSIISAGFKKDGTLSKRSKVAS
KQEFDYLRRYVRKMYRNTGNMITEGDVKIAPYKMKEKTPCTFCAYKSVCQFDESLETNDY
RLFVPKPKEDMIEIIKKEVEGDENGHTA
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgaccgtacgtttattgataggccggtccggaagcggcaaaacggaatactgcctaaat
gaaatccgcgatgaactgcggcttaacccggatggagatccaatcatttatttagttccg
gaacaaatgacgttcctttcagaatataaattaattaccacgcccggccttggcggaatg
atacgcagccaggtatattctttcacgcgccttgcctggagaattcttcaggaaacagga
ggcatgagcagatatcatcttaacagtgttggcatcagcatgcttatccgcaagatcatc
gaagataaaaaggatgagctgaagctttttcagagggctgccgataaaaatggttttatt
cagcaaattgaacaaatgatgactgaattcaaacgttattgtgtagcacccgatgaactg
gctgaaaggcagcagcagctctcaggaacaggaaaatcgaacaaggcacttcaggacaag
cttcatgaccttgagttaatctataaaaattttgaagaatcccttgcaggcaaatatact
gattcagaagactacttccgccttcttgctgaaaaggcctcccattcagagtatctaaaa
aatgccgaggtttatatagatggcttttacagctttacatcacaggaatattcgattgtt
gaacagctgatgaagcagtgtaaaaacgtcactattacactgacacttgacaagcagttt
aaacatagtgcaactgaagaacttcatttattcagaatggccggagaaaactatcagaca
atcaaagaaatggcttcccgcaacagattgggtattgaagaaatggtcattactgagcaa
aaaaggtggtgcagcccttctcttaggcaccttgaggcacattttgacagcaggcctgct
gaggcatttctgggggaagcagacattcacatcggacaggctgtcaacaggagggctgaa
atcgagggcgttgccagaaaaataaataagcttgttcgcacagatggctatcgctatcgt
gatattgcagtacttgcaagaaacggacaggattatcatgacatgattgaaacagtgttc
catgactatgaaatcccattttttattgaccaaaaaagaactatgctgaatcatccgctt
gtggagttaattaggtcaactcttgaaatcatcaatgggaattggcggtatgaaccgatc
ttcagagcagtaaaaacggaactgatttttccgtccaaattaaacgccggcaagcttcgt
gagcaaatggacagacttgagaactatgttcttgcctatggaattcaaggagacaaatgg
acgaagaagaaaagatggatatacaggagaatcagggggctggagtttgaagcggttgcc
cagacagattccgagaagagaatagaagatgagttaagtgatttgcgcgaaatgattaca
ggcccaatattaaggctgcacaggcgcttaaaaaaagctgctgatggccgcggatattgt
gaagctttatttttatacctggaagaattggatgtgcctgtgaagattgaaaagtggaaa
tcagctgaagaggaaaaagggaaccttgttaaatcaagggagcatggacaagcatggaat
gccattatggagcttctcgatcagtatgtagaaatgcttggtgaagaagaagtgacgcta
aagcgctttgcttccgttctggatgccggtctggagtcgcttcgatttacacttgttccg
cctgccatcgatcaggtcatggcggccgatttggaaaggtcaaggctaactgatattaaa
gctgcctttgtcattggtctgaatgaaggagtaatacctgccaaattctcagaggacggt
gtgctggcggatgatgacagagaaattctgaacacaaacggaatgaaactggcgccagga
agccgtacacgacttcttgatgaagaatttatagcctataaagcgtttgttactccatca
gaaaaactttttatcagttacccgctggcaaatgaagaaggtaaagcacttatgccttct
ccttatattaagagattgggagatttattccctgattgcaggcagcattccttcatgtcg
gatccggcagaactgccggaaacggagcagctggaatatgcggataatctaaatactgca
ctttcgtatttgacttcacagcttcagctgaaaaaacgcagctatccaatttatgacctg
tggtgggatgtttataactgctatcttaacaatgagcattggagaaggccggcattaaag
gttctttccagcctgaattatgaaaaccggacacttcagcttggcgcagacatcagtaaa
gaattgtatggtgatcatattcaggcgagtgtttccaggatggaattattccatagctgt
ccattttcccattttgcacagcatggactaaggctgcgggaaagacaggtataccgctta
gaagctccggatatcggggatttattccatgcagctttaaaatttatcgcagaaacagtt
atgacccagaagctttcatggacagatatgacaagggaacagtgtgaaatccttgcaaaa
gaagcagttgaaatgcttgctcctaaactgcaaaatgaaattcttttaagctcgaacaga
catcactatattaagagaaagcttgagcaaatcatcagcagggcttcctatgttatcagt
gagcatgccaaatcaagcggattctcgccagtggggctggaattggggtttggaccaaaa
ggagaactcccttcgcttgtttttcctcttaaaaatgggactaaaatggagcttgtcgga
agaattgacagagtagacaaggctcaggatacaaacgggacatttttacgggtaattgac
tataaatccagctccaaggatttgaatgtcagtgaggtatattatgggattgctctgcag
atgctcacgtatctggacatcattattgcccattccaattctttgatcgggactgaagcc
gatccggcaggagtcctttatttccatgtccataatccaatcgtcagcacttcaaaaatg
ctgacattagaggatatcgagcaggaactctataagaaatttaaaatgaatggcctgctg
ctgggagatgaaaatgtcatcaggttaatggaccagacaattgagacaggcgattcatcc
attatctcagccggatttaaaaaagacgggacactttcaaagcgatcaaaagtggcaagc
aagcaggagtttgattatttgcgccgctacgtaagaaagatgtataggaatactggcaat
atgattacagagggcgatgttaaaattgccccatataaaatgaaggaaaaaacaccatgt
acattttgtgcctataaatctgtatgccaatttgacgaatcgctcgaaaccaatgattac
aggttatttgtgcctaagccaaaagaagacatgattgaaatcatcaagaaggaggtggag
ggcgatgaaaatggccataccgcctaa
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integrated database retrieval system
