Cytobacillus pseudoceanisediminis: M5V91_14820
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Entry
M5V91_14820 CDS
T09231
Symbol
yhaM
Name
(GenBank) 3'-5' exoribonuclease YhaM
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
cpss
Cytobacillus pseudoceanisediminis
Brite
KEGG Orthology (KO) [BR:
cpss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpss03019
]
M5V91_14820 (yhaM)
Messenger RNA biogenesis [BR:
cpss03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
M5V91_14820 (yhaM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UQX52332
LinkDB
All DBs
Position
complement(2788657..2789601)
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AA seq
314 aa
AA seq
DB search
MSKGIVYYEVGEQIELFLLIKSAAKGIASNGKPFLTLIFQDQSGEIEAKLWDVSDDDAKN
YSPETIVKVAGDILNYRGRNQLRIRQIRPASPTDPVKLADFLETAPLSTDEMMSKITQYI
FEMKNPNIQRVTRHLLKKHQKDFLEYPAATKNHHEFVSGLAYHVVSMLDLAKAISGLYPS
LDKDLLYAGVILHDLGKITELSGPISTSYTIEGNLLGHITIMINEIGKAAEELGISGEEI
MILQHMVLSHHGKAEWGSPKPPLIKEAEILHYIDNIDAKMNMLDRALERVKPGEFSERVF
ALDNRSFYKPSFHK
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaaggaattgtttattacgaagtaggagaacaaatcgagctttttctgctaatc
aaaagtgcagctaaagggattgcaagtaatggaaaaccgtttttgaccctaattttccag
gaccaaagcggcgaaattgaagcaaagctttgggatgtgtctgatgatgatgcgaaaaac
tacagccctgaaaccattgtaaaagtggcaggggatattttaaattaccgtggacgcaat
cagctaagaatccgccaaattcggccggcgtccccaacagacccggtcaagctggcagac
tttctcgaaacagcgccattaagtacagatgagatgatgagtaaaatcactcaatatata
tttgaaatgaaaaacccgaatatccaaagggttactcgccatttattgaagaagcatcaa
aaagactttcttgaatatccggccgctacgaaaaatcatcatgagttcgtatccggtctt
gcctatcatgtagtttccatgctggatttggcaaaggcaatttccggtttgtatccaagc
ctggataaggacttattgtacgctggagtcattttgcacgatttaggaaagattacagaa
ctgtctggaccgatttcaacatcttacacaatagaaggaaacttgcttggacatattacc
attatgatcaatgaaattggaaaagctgctgaggagctgggaatcagtggtgaagagatt
atgatccttcagcatatggttttatcccatcacggcaaagcggaatggggcagtccaaaa
ccgccgcttatcaaggaagcagaaattcttcattacattgataacattgatgcaaaaatg
aacatgcttgatagagcccttgagagggtgaaaccaggagagttctccgagcgggtattt
gctctggataaccgttcattctataagcctagttttcataaataa
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