Cytobacillus pseudoceanisediminis: M5V91_16175
Help
Entry
M5V91_16175 CDS
T09231
Name
(GenBank) helix-turn-helix domain-containing protein
KO
K19449
XRE family transcriptional regulator, master regulator for biofilm formation
Organism
cpss
Cytobacillus pseudoceanisediminis
Brite
KEGG Orthology (KO) [BR:
cpss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpss03000
]
M5V91_16175
Transcription factors [BR:
cpss03000
]
Prokaryotic type
Helix-turn-helix
XRE family
M5V91_16175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
SinI
HTH_31
HTH_19
HTH_26
HTH_25
DUF6271
DUF6626
PhaP_Bmeg
Phage_CI_repr
HTH_37
Motif
Other DBs
NCBI-ProteinID:
UQX52533
LinkDB
All DBs
Position
3042128..3042469
Genome browser
AA seq
113 aa
AA seq
DB search
MIGSRIKTLRIKKGYSINELSEKAEVSKSYLSYIERGIQENPSLQVLSRIARTLDANLED
LLEENREDITDLSKLDEEWVSLVKEAIRQGITKEDFAYYLDFIKFKKLNGGNS
NT seq
342 nt
NT seq
+upstream
nt +downstream
nt
atgataggtagccggattaaaaccttaagaatcaagaaaggatactcaattaatgagctt
tctgaaaaagcagaggtatccaaatcgtacctaagctatattgagagaggcatacaggag
aacccttcattgcaggttttatcgcgaatcgccaggacactggatgctaatcttgaggat
ctgctggaagagaatagagaagatattacagacttgtctaagctggatgaggagtgggtt
tcccttgtcaaagaagcaatcaggcagggaattacgaaagaggatttcgcttattatctg
gactttattaaatttaagaagttgaatggaggtaattcttaa
DBGET
integrated database retrieval system
