Cytobacillus pseudoceanisediminis: M5V91_20300
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Entry
M5V91_20300 CDS
T09231
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
cpss
Cytobacillus pseudoceanisediminis
Pathway
cpss03420
Nucleotide excision repair
cpss03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
cpss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
M5V91_20300 (pcrA)
03430 Mismatch repair
M5V91_20300 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpss03400
]
M5V91_20300 (pcrA)
Enzymes [BR:
cpss01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
M5V91_20300 (pcrA)
DNA repair and recombination proteins [BR:
cpss03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
M5V91_20300 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
M5V91_20300 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PcrA_UvrD_tudor
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
Motif
Other DBs
NCBI-ProteinID:
UQX53193
LinkDB
All DBs
Position
complement(3795002..3797233)
Genome browser
AA seq
743 aa
AA seq
DB search
MQFLTDKLLNGLNPQQQNAVKTTDGPLLIMAGAGSGKTRVLTHRIAYLMVEKGVNPYNIL
AITFTNKAAREMRDRIHNMMGGAADEIWISTFHSMCVRILRRDIDRIGYNRNFTILDSTD
QQSVIKSILKDKNLDPKKFDPRAILGSISSAKNELITPEEYAKTAGDYIQQVASDVYTEY
QKRLRRNQALDFDDLIMITIQLFQRVPEVLEYYQRKFQYIHVDEYQDTNRAQYMLVKLLA
SRFKNLCVVGDSDQSIYKWRGADIANILSFEKDYPNAQTIMLEQNYRSTKRILLAANEVI
SKNLNRKPKNLWTENAEGNKIFYYRADSEQGEAQFVAGKIKEYISSGKRSFSDIAILYRT
NAQSRVMEEVLLKSNIEYSIVGGIKFYDRKEIKDILAYLRLIANPDDDISLQRVINVPKR
GIGSGSVDKIANFAQLHEMSMFEALESIELIGLSPKITKGAIEFRDLVKNYTQMQEYLSV
TELVEELLEKSGYRDMLIAEKSIEAQSRLENIDEFLSVTKNFEEASEDKSLIAFLTDLAL
VADIDKLDDDGEKAESVVLMTLHSAKGLEFPVVFLLGLEEGVFPHSRSLMEESEMEEERR
LAYVGITRAEEELYITNAQMRTLFGRTNMNPPSRFIKEIPADLLDGLEPAKKPSPFGSSP
FGSPSASRGAQPQRKAVVRPSASNTGGDEIDWKVGDKAQHGKWGTGTVVSVKGSGEGTEL
DIAFPRPVGIKRLLAKFAPITKA
NT seq
2232 nt
NT seq
+upstream
nt +downstream
nt
atgcaatttttaacggataaattattgaacggactgaatccgcagcagcaaaatgcggta
aaaacaacagacggaccacttcttataatggcaggagcgggaagcggaaagacaagagtg
cttacccacaggattgcttacttgatggtagaaaagggtgtgaacccctacaatattctg
gcaatcacttttacaaacaaagcagcccgtgaaatgcgtgaccgtattcataacatgatg
ggcggagctgcagatgaaatctggatttcgacgttccactccatgtgcgttcgaatctta
agaagagatattgaccgtattggctataaccgcaatttcacgattcttgattcaacagat
cagcaatcggtgattaaatcaatcctcaaggataaaaacctggatccaaagaaatttgat
ccgcgtgctatcctggggtctatcagctcggcaaaaaatgaattgattacccctgaagag
tatgcgaaaacagcaggagattatattcagcaggttgcaagtgatgtatatacagagtac
caaaagagactaagacgcaaccaggcgcttgattttgatgatcttattatgatcacgatt
cagctgttccagagagtgccggaagtgcttgaatattatcagcgcaaattccagtacatt
catgtggatgagtaccaggatactaacagagcgcagtatatgctggtcaagcttttggca
agccgttttaagaatctgtgtgtggtcggtgattccgatcagtccatctataaatggcgc
ggtgcggacatagccaacatcctttcttttgaaaaggattatccaaatgcacagactatt
atgctcgaacaaaattaccgatcaactaaaaggattctgctggctgcgaacgaagtcatc
agcaagaacctcaacagaaagccaaaaaacctttggactgaaaacgcagaaggcaataag
atcttctactatcgtgccgacagcgagcagggagaagcgcagtttgttgcagggaaaatt
aaagaatacatcagcagcggcaagcgaagcttttcggatattgctatcttgtaccgcaca
aacgcacagtcccgtgtaatggaggaagtactgttaaagtcgaacattgaatattccatt
gtcggcggcatcaagttctacgaccgcaaagaaattaaggacatccttgcttacctgcgt
ctgattgcaaatccggatgatgatatcagccttcagcgtgtcatcaatgtgccaaaacgc
ggaatcggctccggttccgttgataaaatcgccaactttgcacagcttcacgagatgagc
atgtttgaagctcttgagtccattgaactgattggcctgagcccgaaaattacaaaaggg
gctattgaattcagggatttggttaaaaactatacacaaatgcaggaatacttatctgtg
acagaacttgtggaagagctgctggagaaatcaggctaccgggatatgctcattgccgag
aagtccattgaagcccagagccgtctggaaaacattgatgaattcctatctgttacaaaa
aactttgaagaagccagcgaagataaatcgcttatcgcatttttgactgatctggctctt
gtggctgacattgataaattggatgatgatggggaaaaagctgaatcagttgtgcttatg
acacttcactcagcaaaagggctagagttccctgttgtctttttactaggtcttgaagaa
ggtgtattcccgcacagccgttctctaatggaagaatcggaaatggaagaggagcgccgt
cttgcttatgtgggaatcacgcgggcagaagaagagctttacattacgaatgcacaaatg
cgtactttatttggacgcacgaatatgaatccgccatcccgatttatcaaagaaattcct
gctgatttgctggatgggcttgaacctgctaaaaagccgtctccatttggatcatccccg
tttggatctccttcagcttcaagaggagcacagcctcagcggaaagcggtggttcgtcca
tctgcatcgaatacaggcggagatgaaattgactggaaagtcggcgacaaagcccagcac
ggaaaatggggtacaggtacagttgtcagtgtaaaaggttccggcgaaggaacagagctg
gatattgcgttcccaagaccagttggcattaaacgtctgctggccaaatttgcaccgatt
acaaaggcgtaa
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