Cytobacillus pseudoceanisediminis: M5V91_20785
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Entry
M5V91_20785 CDS
T09231
Symbol
sigB
Name
(GenBank) RNA polymerase sigma factor SigB
KO
K03090
RNA polymerase sigma-B factor
Organism
cpss
Cytobacillus pseudoceanisediminis
Brite
KEGG Orthology (KO) [BR:
cpss00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpss03021
]
M5V91_20785 (sigB)
Transcription machinery [BR:
cpss03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
M5V91_20785 (sigB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r4_2
HTH_23
HTH_3
GerE
DUF134
DUF1492
IF2_N
PhyR_sigma-like
HTH_28
HNF-1_N
KORA
HTH_37
Sigma70_ECF
NirdL-like_HTH
Motif
Other DBs
NCBI-ProteinID:
UQX53255
LinkDB
All DBs
Position
complement(3892460..3893254)
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AA seq
264 aa
AA seq
DB search
MQKQSQPNQKSKEETNALIKAYQLHQDEDAQNTLVFQYQNLVEAIARKYSKGRSYHEDIV
QVGIIGLLGAIRRYDESFGKTFEAFAVPTIIGEIKRFLRDKTWSVHVPRRIKELGPKIKA
TVEELTTELHRSPRVDEIADVLGVSEEEVLEAMEMGKSYQALSVDHSIEADSDGGTVTLL
DIVGNEDEGYEKVNQMLVLDKVLHVLSEREKLIIQYTYLENMSQKEAGDKLGISQMHVSR
LQRRAIKKLQEAIHSETNNSECLS
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaaacaatctcaacctaaccaaaaatccaaagaagaaacaaatgctttaatcaaa
gcctaccagcttcaccaggatgaagatgctcaaaacaccctggtattccaatatcagaat
ttagttgaagccattgcccgcaagtactcaaagggaagatcttatcatgaggatattgtc
caggtgggcattatcggcttattaggggctatccgccgctatgatgagtcttttggcaaa
acgtttgaggcctttgcagttcctacgattatcggcgaaattaagcgcttcttaagggat
aaaacttggagtgttcatgttccgcgccgcataaaggaattgggaccaaaaattaaagcg
accgttgaagagctcacaacagaacttcataggtctccaagagtggacgaaatagccgat
gtgctgggtgtatcagaagaagaagtgctcgaggcaatggaaatgggaaaaagctatcag
gcgctttctgttgaccattcaatcgaggctgattctgatggcggaacagttacattgctg
gatatcgtcggaaatgaagacgagggctatgaaaaagtaaatcaaatgctagttcttgat
aaagtactgcatgtcctgtctgagagagagaaattaattatacaatacacatatcttgag
aatatgagccaaaaagaagctggagataaactggggatttcccagatgcatgtctcgaga
cttcagcgccgtgcaatcaaaaagcttcaggaagcgatccactctgaaacaaataactcg
gagtgcctttcatga
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