Cytobacillus pseudoceanisediminis: M5V91_27950
Help
Entry
M5V91_27950 CDS
T09231
Name
(GenBank) ATP-dependent RecD-like DNA helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
cpss
Cytobacillus pseudoceanisediminis
Pathway
cpss03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cpss00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
M5V91_27950
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpss03400
]
M5V91_27950
Enzymes [BR:
cpss01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
M5V91_27950
DNA repair and recombination proteins [BR:
cpss03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
M5V91_27950
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
Viral_helicase1
AAA_11
UvrD-helicase
HHH_5
AAA_22
AAA_12
nSTAND3
AAA_16
T2SSE
AAA_28
MCM4_WHD
AAA
NTPase_1
NPHP3_N
UvrD_C
TsaE
DUF4926
DEAD
AAA_17
Motif
Other DBs
NCBI-ProteinID:
UQX54327
LinkDB
All DBs
Position
5319460..5321886
Genome browser
AA seq
808 aa
AA seq
DB search
MEKQDSMDLFAEQGKFIKGRHLVTIFHNEQNLYTVVRIRVDETNDSYDEKEAVITGYLPK
MHEQETYIFYGEFKDHPKFGVQFHASHYRKDLPQTKQGVANYLSSELFKGIGKKTAEQIV
ETLGEDAITRILNQPSLLDKVPKLSPEKAKLLYDTLMEHQGLEQAMIALNQYGFGPQLSM
RIYQVYKEMTIEVVQSNPYKLVEDIEGVGFGRADELGYQIGISGNHPDRIKAACLYILEM
ESMQAGHVYTEAKPLLQSVKKLLEENKRDSIEYRDISNELIKLEEEGKIMAEGQKIYLPS
LYFSEKGLVTNIKRILKQTQYDEQFPESEFLLALGNLEERLGVQYAPTQKEAIQTALMSP
MLILTGGPGTGKTTVIKGIVELYAELHGCSLEPKDYKKEEPFPFLLAAPTGRAAKRMAES
TGLPAVTIHRLLGWNGTEGFDRHEESPLEGRILIVDETSMVDVWLANQLFKALPENMQVI
LVGDEDQLPSVGPGQVLKDLLRSERIPTVRLTDIYRQAEGSSIIELAHEMKKGKLPANIS
AQQTDRSFIKCQPGQIADVVEKVVLNAKKKGYSSKDIQVLAPMYRGPAGIDRLNEILQEI
LNPNPDGTRKELSFGDVKYRIGDKVLQLVNQPENNVFNGDMGEIVSIFYAKENTEKQDMI
VVSFDGAEATYTRQDLNQITHAYCCSVHKSQGSEFPIVILPIVKSYYRMLRRNLLYTAIT
RSRQFLILCGEEDALKIGVERADEQARLTTLSEKLRDAIPLNGETIQEDTAELSLPETLT
LEERLLQADPMIGMGNITPYDFMEKEYS
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atggagaaacaggattccatggatctttttgccgaacagggaaagttcataaaaggcaga
catcttgtcacaatctttcataatgagcaaaacttatatacggttgtgcgaatccgggtt
gatgaaacgaatgactcttatgatgaaaaagaagcggtcattacaggttatctgccaaag
atgcatgagcaggaaacgtatattttctacggtgaattcaaggatcaccctaagttcggt
gtccaattccacgcaagccattaccggaaagatcttccccagaccaaacaaggtgtagcc
aattatttatcaagcgaattatttaaagggattggaaagaaaaccgccgagcaaatcgtt
gaaacacttggcgaagatgcgattacacgcattctgaatcagccgtctcttctcgataag
gttccaaaactgtcacctgaaaaagcaaaattgctttacgacacgcttatggaacatcaa
ggccttgagcaagccatgattgcgctaaatcaatatggttttggtccgcagctttccatg
agaatttatcaagtatataaagaaatgacgattgaagtcgtccaaagcaatccgtataag
ctggttgaggatatagaaggagtcggctttggccgtgcagatgaactgggatatcaaatc
ggcatatcaggtaatcatcctgatcgtattaaagcagcctgcctctacatacttgaaatg
gaaagcatgcaggcaggccatgtttatactgaagcaaaacctcttctgcaaagtgtgaag
aagcttttagaagaaaataagcgtgatagcattgaatacagggatatatccaatgaactg
attaagcttgaagaggaagggaaaatcatggctgaaggccaaaaaatataccttccatcc
ctttacttttctgaaaagggacttgtaaccaatattaaacggatccttaagcaaacacaa
tatgatgaacagtttccggagtcggaatttcttttggcccttggcaatctggaggaacgt
ctgggtgttcagtacgccccgacccaaaaagaagccattcaaacagctcttatgtctcct
atgctgatactgactggcggccctggtacaggaaaaacaaccgttattaaaggaattgtt
gagttatatgccgaactgcatggctgctccctggagccaaaagactataaaaaggaagag
ccttttcccttcctgctggctgcgcctacaggaagggctgcaaaacggatggccgagtca
acagggctgcctgcggtaaccattcaccgcctgcttggctggaatgggaccgaagggttt
gaccggcatgaagagagtccattggaaggcaggattttaattgtagatgagacatcaatg
gttgatgtttggcttgctaatcagcttttcaaggctctccctgaaaatatgcaggtgatc
cttgtgggggatgaagatcagctgccctcagtggggccaggccaggttttaaaagatctt
ttgcgttcagaacgtattcctaccgttcgtttaacagatatatacaggcaggctgaagga
tcctcaatcattgaattggctcatgaaatgaaaaaaggcaaacttccggcgaacatttct
gcacagcagacagatcgttcctttatcaaatgccagccgggccaaattgcggatgttgtt
gaaaaagttgttctgaatgccaagaagaaaggttattcttcaaaagatattcaggtgctt
gcccctatgtaccgcggacctgcaggaattgacaggctaaacgaaatattgcaggaaata
ctaaatccaaatcctgatggaacgagaaaagagctgtccttcggtgatgtgaaatacaga
atcggcgataaagtccttcagcttgtcaatcagcctgagaataatgtgtttaatggggat
atgggtgagattgtttctattttttacgcaaaggaaaatacggaaaaacaggatatgatt
gtcgtatccttcgatggtgcagaagctacttatacaaggcaggatcttaatcagatcaca
catgcctactgctgttcagtccataaatcccagggaagtgaattccctatcgtcattttg
ccaattgttaaaagctattacaggatgcttaggagaaatcttctttataccgccattacc
cgcagcagacagtttttgatactgtgcggtgaagaagatgcgttgaaaatcggtgtggaa
cgtgcggatgaacaggcccgactgacaactctttcagaaaagcttagagatgccattcca
ttaaatggtgaaacaatacaggaagatacagcagagttatccctgcctgaaaccttaacc
cttgaagaaaggcttctccaagccgatccaatgataggaatgggaaatataacaccgtat
gattttatggaaaaagaatatagctaa
DBGET
integrated database retrieval system
