Chlamydia psittaci WS/RT/E30: B601_0722
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Entry
B601_0722 CDS
T02314
Symbol
uvrA
Name
(GenBank) excinuclease ABC, A subunit
KO
K03701
excinuclease ABC subunit A
Organism
cpst
Chlamydia psittaci WS/RT/E30
Pathway
cpst03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
cpst00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B601_0722 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
cpst03400
]
B601_0722 (uvrA)
DNA repair and recombination proteins [BR:
cpst03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B601_0722 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
B601_0722 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_inter
SMC_N
UvrA_DNA-bind
nSTAND1
AAA_29
AAA_16
RsgA_GTPase
NACHT
Anti-TRAP
AAA_21
AAA_25
Viral_helicase1
DUF7602
Motif
Other DBs
NCBI-ProteinID:
AFS23355
LinkDB
All DBs
Position
746458..751878
Genome browser
AA seq
1806 aa
AA seq
DB search
MPSLPVRISGITVRNLKNISIEFLPGEIVLLTGVSGSGKSSLAFDTVYAAGRKRYISTLP
SFFATTLSSLPEPNVESIQGLSPTIAVKQNHFAYHFHATVGSVTELSQHLALLFSLDGEA
RDPVSNKVLHLQSKEKILATLENIPEGTQITLLAPLPDTSSSAIQECVRQGYTKIRMHNE
ISSIYPFLSSPLTTDHPVDVVVDSFIKNESNNARMKVSLFAALQLGQGRCSIHSGSQEET
FSTQVYIPETQQTYTPLTRQLFSPHSLEDRCFKCQGTGVLITIKDPSLIQKDLSIRENCC
KLAGNCSTYFYHALYQSLADTLNFSLDTPWKQLPEHIQDTFLYGQNSLVLPVRLFDPALG
KKSLTHKVWRGVLNDIGEKVRYGAKPSKYIPEGTTAVPCPKCQGIGIGEYASAATWQGKT
FIELQKMPLDELFSLTSSITPSSKSVHEVLEGFNNRLATLIQLGLSYLTLDRALATLSGG
EQERTALAKHLGAELSGITYILDEPSIGLHPRDTDKLIQVIQKLRSQGNSILLVEHDEHM
ISFADRIIDIGPRAGIFGGEVLFNGTPQEFLSKSNSLTAKYLRNELTIDIPKRRAKTQAT
LSLSHATTNNLKDVTISLPLERITAVTGVSGSGKSSLINDTLVPAMERLIQGKPEPHLRI
DGGDISRVVHITRDLPGRSQRSISLTYIKAFDDLRELFSQLPKSKRLGLTKGHFSFNLPL
GSCTECQGIGAVTLDDSTLIPCPLCHGKRFQPQILDVHYQGKSIADILEMTAYEAEKFFI
TTPHIHEKIHALCSLGLDHLPLGRPLSSLSGGEIQRLKLTYELLSPSKKPTLYILDEPTT
GLHTHDILALIQVLFSLTHQGHTVVIIEHNMHIVKTADHVIELGPEGGNLGGYVLASCSP
EELILLDTPTAKALQPYFTKTPALPKCTKTSQNTHILRDISVKDAYHHNLKHIDVTLPRN
ALTAISGPSASGKHTLVFDILYASGNIAYAELFPYYVREALIKKTPLPKVESVRGLSPVI
AIRKTGIKKNSRHSLASALDITDGLEKLFSLLGKPHCPLSGTLLEKITPQTLVAKLLHEY
ANSYVTITAPISSDEDLSIALEAKKKEGYLKLFANQEVYDLEEPLPEILEDPAIVIQHTK
ISQNHESSLLSSLTLAFSLSPTPKLHIHNHQGIVHSLAFNLGWQDALGNSYPNVTRKLLS
REHIEGQCQQCYGSGNVLKLSLMDHKDKILNYSPIALFELFFPESSIKPILDLIKELKIA
KTTPIKNLDIHTQELLFKGTNRYPGLERILLDHCNRVPSCPLLQPLLVHDICPTCSGWGI
HTYAQHVRIGQTSIVDIYQQDTHFLKDFLNTLHDDQAQPIIQDLQNRLTFINKVGLSYIT
LGQQQNTLSDGEYYRLHLAKKISTNLTDIIYLLEDPLSGLHPKDVPTLVQLIKELIANNN
TVIATDRSNVLKHYAEHTIHLGPGSGPQGGYLTTDTSVSLENEEYPQTPFKHTLDVRLTV
HNITDLSVQAPLRSLVAIAGVSGSGKTSLLTEGFYKQAQKLIHNGYELFSHVILLDSHPL
SSSQRSDISTYFDIAPSLRNFYASLTQAKALSITSSMFSTNTKQGQCADCLGLGYHLIDR
AFYALEKRVCPTCSGYRIQPLAQEAVYEGKHFGKLLQTPIEELPILFPFLQRIQAPLQAL
IRAGLGYLPLGQNLSSLSLSEKISVKIAKFLYLPPKEPTLFLLDEIAASLDRNQKCQLQR
LFRTLISQGHSIIYVDHDVHLLKQADYIIELGPGSGKYGGKLIFTGRPKDILASESSVLK
TYMCGL
NT seq
5421 nt
NT seq
+upstream
nt +downstream
nt
atgcccagcttacccgttcgtatttctggtattacagttagaaatctgaaaaatatctct
atagagtttctaccaggagaaattgttctactcacaggagtatcaggatctggaaaatct
tcgttagcttttgatactgtttacgctgcaggaagaaaacggtatatatccactctacct
tcattttttgcgacgactttatcttctttacctgaacctaacgttgaaagcatccaaggg
ttatctccaaccattgctgttaagcaaaatcattttgcttatcactttcatgctactgtc
ggcagtgttacagaactttcccaacaccttgcgttgctattttctctggatggggaggct
agagatcctgtaagcaacaaagtgctgcatctacaaagcaaagaaaagattcttgcaaca
cttgagaatatccctgaaggtacgcaaatcacactacttgctccgttaccagataccagt
agctcagcaattcaagagtgtgtcaggcagggatatacgaaaatccgtatgcataatgaa
atctcatccatctatccttttctatcgtctcctctgactactgatcaccctgtcgatgtt
gtcgtggattctttcattaaaaatgaaagtaacaatgcaagaatgaaagtcagcttattc
gcagcgctgcaactaggtcaggggcgctgctctatacattccggatcccaagaagaaacc
ttttctacacaagtctatataccagaaacccaacaaacttatacgccattaacacgacaa
ttgttttctccccatagccttgaagatcgttgttttaagtgccagggaacgggagttctt
attactattaaagacccttctcttattcaaaaggatttatccatccgggaaaactgttgt
aagctcgctggaaactgctctacttatttttaccatgccctttatcaatctctggcagac
acgttaaacttcagcttagatactccttggaaacagcttcctgagcatattcaggacacc
tttctctacggtcaaaactccctagttcttccagtacgcctttttgatcctgcacttggg
aagaaatccctgacccataaagtgtggagaggagttcttaatgatattggtgaaaaagta
cgctatggagcgaaaccttcaaaatatattcctgaggggaccacagcagtcccatgtcct
aaatgtcaaggaatagggatcggagaatacgcatctgcagccacttggcaaggaaaaact
tttatcgaacttcagaaaatgcctcttgatgagttgttctctttaacctcttctataaca
ccatcatcaaaatctgtgcatgaggtactagaagggttcaataatcgccttgctacactt
attcagttgggtctttcctaccttaccttagatcgggccttagcaacgctatcaggagga
gagcaagagcgtactgctcttgctaagcatcttggcgctgagttatcaggaattacctac
attcttgatgaaccttccataggactccatcctcgtgataccgataagctcatacaagta
attcaaaaactacgcagtcaagggaattccattcttcttgtagaacatgatgaacatatg
atctctttcgcagaccgtattattgatattggtccacgagcagggattttcggaggtgag
gtactatttaacggcactcctcaagaatttctaagcaaaagcaactctctaacagcaaaa
tatttacgaaacgaactcactatagatatccccaaaagacgtgctaaaacacaagccact
ctttctctatctcatgcaacaaccaacaatttgaaagacgtgaccatttccctacctttg
gaaagaatcactgcggttactggtgtttcaggatctggaaaatcgtctttaattaacgac
acgttagttcctgctatggaacgtcttatacaaggaaaaccagaacctcacctgcgcata
gatggaggggatatttcacgtgttgtccatattactcgcgaccttcctggccgctcgcaa
cgttctatttccctaacgtatattaaagcttttgatgatctgcgagaactattttcccaa
ctgcctaaaagtaagcggctggggttaactaaagggcattttagttttaatctaccgtta
ggatcgtgcacggaatgccaaggaataggggcggtaactttagatgattctaccctcatt
ccctgtccgctgtgtcatggaaaacgtttccaaccccaaattttagacgtacattatcaa
gggaaaagcatcgctgacattttagaaatgacagcatatgaagcagagaaattctttata
actactccccatattcatgaaaagatacatgcattatgttctctaggtctcgatcatctt
cctttaggacgacctttatccagcttatcaggaggagaaattcagagattaaagcttacc
tatgagcttctttccccctctaaaaaacctaccctctatattcttgatgagccaacaaca
ggcttacatactcatgacatccttgctcttatccaagttttgttttctcttacacaccag
ggacatacggtagtgatcatagaacataatatgcacattgtaaaaactgcagatcacgtc
attgaacttggccctgaaggaggaaatctcggtggatatgtactggcctcatgttctcct
gaagaactcattctcttagacactcctacagcaaaagctttgcaaccatattttacaaag
accccagctctgcctaaatgcacgaaaacaagccagaatacgcatattctcagagatatt
tctgttaaagatgcttatcatcacaacctgaaacacattgatgttacgctgccacgtaat
gccttaacagctatttctggaccttcagcctcaggaaagcatactttagttttcgatatc
ctttatgcctcaggaaatatcgcttatgccgaactctttccttattatgttcgtgaagct
ctcattaaaaagacccctctaccaaaagtagaaagtgttcgaggattatctccagttatt
gccatcagaaaaacaggaataaagaaaaactcccgacattccttagcttcggccttagat
attactgacgggcttgaaaaactcttttcccttttagggaagccccactgcccgttatca
ggaactctcttagaaaaaatcactccacaaactcttgttgcgaaacttcttcacgagtat
gcaaattcttatgtaacaataacagcgcctatatcctcagatgaagatctctctatcgct
ttagaagcaaagaaaaaagaagggtatctaaaattatttgccaatcaagaagtgtatgat
cttgaagaacctctccctgagattttagaagatcctgctatcgttatccaacacacaaaa
atctcccaaaaccacgagtcctcgcttttatcttctctaactttagccttttccttatcc
cctactcccaaattacatattcataatcatcaagggattgttcattcactagcctttaat
ctcggctggcaagatgctttaggaaatagctaccctaacgttacacgcaagcttttatct
cgcgagcatattgaagggcaatgtcaacaatgttatggatcagggaatgttttaaaactc
tctttaatggatcataaagataaaattcttaattactctcctatagctctctttgagctc
ttcttccccgaaagctccataaaacctattctcgatctgattaaagaactaaaaattgca
aaaactacgcccatcaaaaatctcgatattcatactcaagaactattatttaagggaacc
aacagatatccaggattagaaaggatccttcttgaccattgtaaccgcgttccctcctgt
cctcttttacaacctttgctcgtccatgacatctgcccaacatgctctggatggggaatt
cacacatatgctcaacatgtacgtatagggcaaacctccattgtagatatctatcaacaa
gacacccactttttgaaagacttcttaaacacccttcacgatgatcaagctcagccgatt
atacaagatttacaaaatcgtttaacattcattaacaaggtaggtttaagctacattacc
ttaggacaacaacaaaatactcttagcgatggtgaatattatcgcctacacttagcaaaa
aaaatctctacaaaccttacggacatcatttatcttcttgaagatcctttatcaggtctc
catcctaaggatgttcccactctagtacaactgattaaagagctcattgctaacaacaat
accgttattgctacagaccgcagcaatgtattaaagcattacgcagagcatacaattcat
ttaggaccaggatctggacctcagggagggtacctcacaactgatacatccgtatctcta
gaaaatgaggagtatcctcaaactccctttaaacatactttagatgtacgtctcacggtt
cataacatcacggatctcagtgtacaagctcctctccgcagcttggttgcgattgctgga
gtatcgggatcaggaaagacctcattgctaactgaaggtttttataaacaggctcaaaag
cttatacacaatggttatgagctattttctcatgtaatattgttagattctcatcctctt
tcttcttcacaacgttcggatatcagtacgtattttgatattgctccaagtttaagaaac
ttctatgcatcgctcacccaggctaaagccttaagcattacatcaagtatgttcagtaca
aatactaagcaaggacagtgtgcagattgtttaggattaggttatcatctaatcgaccgg
gctttctatgcattagagaaacgcgtatgtccaacgtgctcaggataccgaatccaaccc
ctagctcaagaagctgtttatgaagggaagcactttgggaaattactacaaactcctatt
gaagaactccctatactctttccttttcttcaaaggattcaagctcctttacaagcgctt
atacgggcaggactgggctatttacctttaggccaaaacctctcttctctatcgcttagt
gaaaagatctctgtgaaaatagcgaaatttctctacttacctccaaaagaaccaacatta
ttcctactcgatgagatagcggcctccttagatagaaatcagaaatgccaactacaaaga
ctattccgtaccctgatatctcaaggacattcgattatttatgttgatcatgatgtgcat
ttgctgaaacaagcagattatatcatagaattggggcctggctctgggaaatatggaggg
aaactgatctttacaggaagaccaaaagatatcttagcttcagaatcctctgtattgaaa
acgtacatgtgtgggttataa
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