Corynebacterium pseudotuberculosis CS_10: CPTB_00139
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Entry
CPTB_00139 CDS
T03483
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
cpsu
Corynebacterium pseudotuberculosis CS_10
Pathway
cpsu03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpsu00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CPTB_00139
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpsu03021
]
CPTB_00139
03019 Messenger RNA biogenesis [BR:
cpsu03019
]
CPTB_00139
Transcription machinery [BR:
cpsu03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CPTB_00139
Messenger RNA biogenesis [BR:
cpsu03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CPTB_00139
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AIG08195
LinkDB
All DBs
Position
complement(150112..152256)
Genome browser
AA seq
714 aa
AA seq
DB search
MTTTDNGAQRNLAALRLPELRKIAAEMGLKGTSALRKGDLIAAISGAQGGKAAQSGHSAA
PAAKRNARAQAAPKAEKDSAPVENSVPEVSKEQQEKADQVPAKESKSRRRRVLKTTGTMD
STHETASSEPISQESSPAEEEKPRRRRVTRRVEVSSEKRDPAENSPQDKTDTPSESNDGV
ARVSENGDAEDENRYESRSAARRARRNRARREHREDRQTSQREDNHAEGDRSSNDEEQRK
EASVDNVKATGRREASEQQAADQPQTRETREGSENEHPRQRNGRHHERGERGDRNRRNRR
NRRGRDRDDHRDNSNIEPREDEVLQNIAGILDIVDSNVAFVRTSGYHAGSADVYVNNQMI
RRLGLRAGDAITGQVRMNGDNNHGGHHGHNRGRNRQKYNPLVRVESVNGMSVEEAKARPD
FSKLTPLYPNQRLRLETEPKILTTRVIDLIMPIGKGQRALIVSPPKAGKTTILQNIANAI
ATNNPECYLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPSEHTAVAELAIERAKRLVE
QGQDVVVLLDSITRLGRAYNNSSPASGRILSGGVDSNALYPPKRFLGAARNIENGGSLTI
IATAMVETGSAGDTVIFEEFKGTGNAELKLDRKISERRVFPAVDVNPSGTRKDELLLVPE
EARIMHKLRRILAALDNQQAIDLLIKQLKKTKSNGEFLMQIASSAPMAADAEEE
NT seq
2145 nt
NT seq
+upstream
nt +downstream
nt
gtgacaacaacagataacggcgcacagcgtaatcttgctgcattgcgtctgcccgagctg
cgtaagatcgccgctgaaatgggtctaaaaggcacctctgcattgcgcaaaggtgatctt
atcgccgcgattagcggcgcgcaggggggaaaagctgcacagagcgggcatagtgccgct
cctgcagcaaagcgtaatgctcgagcacaggctgcccccaaagcagagaaagactctgca
cctgtagaaaactcggttccagaagtatctaaggaacaacaagaaaaagctgaccaggtt
ccagctaaggagtccaagtcgcgtcgccgtcgcgttctgaagaccacaggaaccatggat
tcaactcatgaaacagcttccagtgagcctatttcacaggaatcctcgccagcagaggaa
gaaaagccacggcgacgccgtgtgactcgtcgcgtagaagtttcttcggagaagcgcgac
cctgcagagaattctccgcaggataaaacggatacgcccagcgaatcgaatgatggtgta
gcacgagtttccgagaatggcgatgcagaggatgaaaatcgctatgagtcgcgttcggct
gctcgacgtgctcggcgtaatcgtgctcgtcgggaacaccgtgaagaccgtcagacgtct
cagcgcgaggacaatcacgctgagggcgatcgatcttctaacgatgaggaacagcgcaaa
gaagcatccgttgataacgtgaaggcaacggggcgtcgagaagcctctgaacagcaggct
gcagatcagccgcaaactcgggaaactcgtgagggctctgaaaatgagcatcctcgtcag
cgcaatggccgtcaccatgagcgtggcgagcgtggggatcgtaaccgtcgtaaccgccgt
aatcgtcggggtcgtgaccgcgacgatcatcgggataactccaacattgagccccgtgaa
gacgaggttttgcagaacatcgccggcatcctcgacattgtggatagcaatgtcgctttc
gtgcggacctcgggctatcatgcaggctctgcagatgtctacgttaacaaccagatgatt
cgtcgtttgggtttacgtgctggcgatgccatcaccggacaggttcggatgaacggcgat
aacaaccatggcgggcatcatgggcataatcgtggacgcaaccgccaaaagtacaatccg
ttggttcgcgttgaatctgtcaacggcatgtccgtagaagaagctaaggctcgtccggac
ttttctaagctcactccgctgtacccgaaccagcgactgcgtttggaaacagagccgaag
atccttaccactcgtgtgatcgacttgattatgcctatcggcaaaggccagcgtgcgctt
atcgtgtctccgccaaaagctggtaagactacgattttgcaaaacatcgctaatgccatc
gccacgaataatcccgagtgctatttgatggtggtgcttgtcgacgagcgccctgaagaa
gtcaccgacatgcagcgctccgtcaagggtgaggttattgcctctaccttcgaccgtccg
ccaagcgagcacactgctgtagccgagttggcaatcgagcgtgctaaacgactcgtagaa
caaggacaagacgttgtggtgcttctagattccatcactcgccttggccgcgcttataac
aactcttcgcctgcttcaggtcgtatcctgtccggtggcgtggattcgaacgctctctat
cctccaaagcgcttcctgggtgcggctcgtaacatcgaaaatggtggttcgctgaccatc
attgctactgcaatggtagaaactggttctgcaggcgacaccgtgatctttgaggagttt
aagggcaccggcaacgcagagctcaaactggaccgtaagatctccgagcgtcgagtattc
cccgcagtagacgttaacccgtcaggaactcgtaaggacgagctgcttttggttcctgaa
gaagctcgcatcatgcataagttgcgcaggattctcgcagccttggacaaccaacaggcc
atcgacttacttattaagcagcttaagaagaccaaatctaatggtgagttcttgatgcag
atcgcttcaagtgcgccgatggctgcagacgccgaggaggagtaa
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