Corynebacterium pseudotuberculosis CS_10: CPTB_01990
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Entry
CPTB_01990 CDS
T03483
Name
(GenBank) Ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
cpsu
Corynebacterium pseudotuberculosis CS_10
Brite
KEGG Orthology (KO) [BR:
cpsu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpsu03016
]
CPTB_01990
Enzymes [BR:
cpsu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CPTB_01990
Transfer RNA biogenesis [BR:
cpsu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CPTB_01990
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
GatB_Yqey
Motif
Other DBs
NCBI-ProteinID:
AIG10046
LinkDB
All DBs
Position
complement(2069110..2070315)
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AA seq
401 aa
AA seq
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MPELLYEPREGLPPLCTTVEEIASAARLLESGVGPFAIDTERASGFRYDDRAFLLQIRRR
QAGTVLIDPSVHPEAVTQHLGKAINSHTWIIHAAPSDLPCLRELGLRPSNIFDTELAGRL
MGMPRVNLAAMSEEIVGLTLLKGHGAEDWSRRPLPIDWLNYAALDVETLLDLADAMAELL
DSQGKLEWAEQEFEHLVRMEYENPRQPKQWVDLKGIGSINDPEQLIVAREIWNAREKEAC
ETDKAASRLLPDKAIVGLALSMPQSVRAVERSPGYPSRLRKAARKWLGIVRAARELPPSQ
RPQRNPRPPRPYPAKSLWGRDYPEVLAVWDDVQSSLNSLSLQLEIPIENILQPAALREIV
WLCCTTYSITSHDDLVQALKDHQVREWQIQIVLEPLHRKLL
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagcttctctacgaaccccgggagggtcttcctccgctgtgcacgacagtagaa
gaaatagccagtgctgcgaggcttcttgaatctggcgttggaccttttgccatcgataca
gaacgtgcttctggttttcgttatgacgaccgcgcttttctcctgcagatccgcagaagg
caagctggcacggtacttattgacccctcggttcatccagaggccgttacccagcacctt
gggaaagctatcaattcccatacctggatcattcatgcggctcctagcgatctcccttgt
ctccgggaactagggctacgcccctccaatatttttgacactgaacttgcaggtcgtctc
atgggtatgccacgagtcaaccttgcagcaatgtcggaagaaatcgtgggtcttactttg
ctcaaaggccatggcgcagaggactggtccaggcgccctcttcctatagactggctcaac
tatgctgccttagacgtagaaacccttttggatctagccgacgcaatggcggaattactt
gattctcagggcaagcttgaatgggctgagcaagagtttgagcatcttgtccgcatggaa
tatgaaaatccgcggcagccgaagcaatgggtagatcttaaaggaattggttccattaac
gatcctgaacaacttatcgttgccagagagatctggaatgctagagaaaaagaagcttgt
gaaacagacaaggcggcatcgcgattattaccagataaagcaatagttggtttggctctt
tctatgccgcagagtgtacgggcggtagaacgttctcccggttatccttctcgattacgg
aaagcggctcgtaagtggctggggattgtcagggctgctcgtgagctgcctcctagtcaa
cgtccgcaaaggaaccctcgcccaccgcgaccttatccagcgaaatctttgtgggggcgt
gattaccctgaagtcttggctgtctgggatgatgtgcagagctctttgaattctctatcc
ctccagttagagattcctattgagaatattcttcagcctgcagcactccgggaaatcgtc
tggttgtgctgcaccacgtactcaattacttctcatgatgacctggtgcaagccttaaaa
gatcaccaagtacgcgaatggcaaatccagattgttctcgagccgctgcaccgcaagctt
ttataa
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