Chlamydia psittaci VS225: B600_0871
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Entry
B600_0871 CDS
T02312
Name
(GenBank) S1 RNA binding domain protein
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
cpsv
Chlamydia psittaci VS225
Pathway
cpsv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpsv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B600_0871
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpsv03019
]
B600_0871
03016 Transfer RNA biogenesis [BR:
cpsv03016
]
B600_0871
Enzymes [BR:
cpsv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
B600_0871
Messenger RNA biogenesis [BR:
cpsv03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
B600_0871
Transfer RNA biogenesis [BR:
cpsv03016
]
Prokaryotic type
tRNA degradation factors
B600_0871
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
KfrA_N
KH-I_KHDC4-BBP
KH_2
S1_RRP5
CovS-like_HAMP
DUF3810
Motif
Other DBs
NCBI-ProteinID:
AFS23017
LinkDB
All DBs
Position
854377..856551
Genome browser
AA seq
724 aa
AA seq
DB search
MTFETISVTLEEGKTLVFETGKIARQANGAVLARMQETWVFSSVCAANLEEAVDFLPLRV
DYQEKFSSIGKTLGGFIKREGRPTEREILTSRLIDRSMRPSLPNRLMQDVQILSYVWSYD
GVTLPDPIAICGVSAALAISDIPQTSIVAGVRVGFVNNRWVVNPTKAEMDVSRMELVLAG
TENAILMIEGHCDFFTEEQVIEAIEFGHKHIVTICKALKDWQKQIGKEKNTSQIVSLPEE
VQSAVNALVEGKFVDLLKIKEKKAFEAASKQLENEVVEQLQEENEVFTEFNIKIAFKQAK
SNFMRSLIREQGIRSDGRSITTIRPISIETSFLPRTHGSCLFTRGETQTMAVCTLGSEAM
AQRYEDLNGEGLAKFYLQYFFPPFSVGEVGRIGSPGRREIGHGKLAEKALSHTLPDPVKF
PYTIRIESSITESNGSSSMASVCGGCLALMDAGVPIKTPIAGIAMGLILDDDHVTILSDI
SGLEDHLGDMDFKVAGNTEGITAFQMDIKVEGITPAIMRAALAQAKDGRQDILETMKQAL
AAPKTDLSQYAPRIETMQIKPNKIATVIGPGGKQIRQIIEEAGVQIDINDSGLVSISASS
PQAIEKAKSIIEGLVGEVEVGKIYEGRVTSVVPFGAFVEILPGKEGLCHISEFSKQRIDN
VGDFVKQGDTLTVKLLSINEKDNTNSAIKLLSVSSFLVFLCCFSLDRFEKTKKAPNFGAF
HIST
NT seq
2175 nt
NT seq
+upstream
nt +downstream
nt
atgacatttgaaactatttctgttacccttgaagaaggcaaaacattagtatttgaaacg
gggaaaatagctcgtcaggctaacggcgcggttcttgctcgcatgcaagaaacatgggtc
ttttcgtctgtttgtgcggctaaccttgaggaagctgtcgactttctacctctaagagtt
gattaccaagaaaagttttcttctataggaaaaactttaggtgggtttattaaaagggaa
ggccgcccaacagaaagagaaattttaacttctcgcctcatagatcgctccatgcgtcct
tcattacctaaccggttaatgcaggatgttcaaattttatcttacgtatggtcatacgac
ggagtaactcttcctgatcctatagcaatttgtggtgtttctgcagccctagcaatttct
gacattcctcagactagtattgtagctggtgttcgtgttggctttgtgaacaatcgttgg
gtagttaacccaacaaaagctgaaatggatgtttccagaatggaactcgtgttagcagga
acagaaaatgctattttaatgatcgagggacactgcgatttctttacagaagagcaggtt
atcgaagctattgaatttggtcacaaacacattgtcactatatgcaaagcactcaaggat
tggcaaaaacaaataggtaaagaaaagaatacaagtcaaattgtttctctcccagaagaa
gtccaatctgctgtaaacgcacttgtggaaggaaagtttgttgacctcctgaaaattaag
gaaaagaaagcttttgaagctgcttcaaaacaattagaaaatgaagtcgtagaacaactc
caagaagaaaacgaagttttcactgagttcaatattaaaattgcttttaaacaagcaaag
tctaacttcatgcgtagtctgatacgtgaacaaggcatacgttccgatggacgttctata
actactattcgtcctatctctattgaaacatctttcctcccaagaactcacggtagttgt
ttatttactcggggagaaacccaaactatggctgtctgtactttaggtagtgaagccatg
gcccaacgttatgaagatttaaatggtgaaggactagccaaattttatttacaatacttc
ttccctcccttctctgttggagaagtaggaaggatcggctccccaggaagaagggaaatc
ggtcatggtaaacttgctgaaaaagcattaagtcatacgctacccgatcctgtgaagttc
ccttatactatccgaatagaatccagcattactgaatctaatggttcttcatctatggca
tctgtttgcggaggttgcttagctttaatggatgccggagttcctattaaaactcctata
gctggtatagccatgggattaatattagatgatgaccatgtaactattctctcagatatt
tccggattagaagatcatttaggtgatatggatttcaaagttgctggaaataccgaagga
attacagcattccaaatggatatcaaagtagaaggcattactcctgctattatgcgagct
gccctagcccaagctaaagatggtcgtcaagatattcttgaaactatgaaacaagctctt
gcagctcctaaaacagacttatctcaatacgctcctcgcattgaaacaatgcaaattaag
cctaataaaatcgctactgttattgggcctggaggtaagcagattcgtcaaattattgaa
gaagctggagtacaaattgatattaatgactcgggtcttgtcagtatttctgcttcttca
ccacaagcaatagagaaagctaaatctattattgaaggtttagttggtgaagttgaagtt
ggtaagatttacgaaggtcgcgtaacctctgttgttccttttggagcctttgttgaaatt
ctccctggtaaagagggtctttgccatatttctgagttttctaaacaacgtatagacaac
gttggtgatttcgttaaacagggagacaccctaactgttaagctgttaagcatcaacgaa
aaggacaatacaaactcagccataaagctactctcagtgagtagtttcctcgttttcctt
tgttgtttttctttagatcgttttgaaaagacaaaaaaagccccgaatttcggggctttt
cacatcagtacctaa
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