Chlamydia pneumoniae TW-183: CpB0634
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Entry
CpB0634 CDS
T00136
Name
(GenBank) transcription termination factor rho
KO
K03628
transcription termination factor Rho
Organism
cpt
Chlamydia pneumoniae TW-183
Pathway
cpt03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cpt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CpB0634
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpt03021
]
CpB0634
03019 Messenger RNA biogenesis [BR:
cpt03019
]
CpB0634
Transcription machinery [BR:
cpt03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CpB0634
Messenger RNA biogenesis [BR:
cpt03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CpB0634
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_25
AAA_22
OB_RNB
S1CSD-TOTE-2
AAA
DUF5855
Mor
NACHT
Motif
Other DBs
NCBI-ProteinID:
AAP98563
UniProt:
A0ABN3YQ52
LinkDB
All DBs
Position
complement(697348..698742)
Genome browser
AA seq
464 aa
AA seq
DB search
MKEERSSEILPRVKETKKHAYVSMQEKSCVGECAVVASESEEAESVTVTKIAKLQRMGIE
ELNILARQYGVKNIGSLTKSQVVFEIVKAKSERPDELLIGEGVLEVLPDGFGFLRSPTYN
YLPSAEDIYVSPAQIRRFDLKKGDTIIGTIRSPKEKEKYFALLKVDKINGSTPDKAKERV
LFENLTPLYPNQRIVMEMGKDHLAERVLDLTAPIGKGQRGLIVAPPRSGKTVILQSIAHA
IAVNNPDIVLIVLLIDERPEEVTDMIRQVRGEVVASTFDEQPERHIQVAEMVIEKARRLV
EHGNDVVILLDSITRLARAYNTVQPHSGKILTGGVDASALHKPKRFFGAARNIEGGGSLT
ILATALIDTGSRMDEVIFEEFKGTGNMELVLDRRLSDRRTYPAIDLIKSGTRKEELLYHP
SELERVYLFRQAIADLTTIDAMHLLLGRLKKTNSNAEFLLSLKE
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagagcgttcttcagaaatcttgcctagggtgaaggaaacgaaaaaacatgct
tacgtttctatgcaggaaaaatcttgtgtaggggagtgtgctgtagttgccagtgagtct
gaagaggccgagtctgtcacagttacaaaaattgctaaactgcaaagaatgggaattgaa
gagctgaatatattagctcgccaatacggtgtgaaaaatataggatctctaacaaagtct
caggtcgtctttgagattgttaaagccaagtcagagcgcccagatgaattgctgataggt
gaaggcgtgttagaagtccttccagacggatttggatttctgagatccccaacctataat
tacctaccttctgctgaagatatttatgtttctccagctcagattcgtagatttgatctc
aaaaaaggtgatacgattatcggtacgatacgctcacctaaagagaaagaaaagtacttt
gctctattgaaagtagataagatcaacggatctactccagataaagctaaagaacgtgta
ctttttgaaaacctgacccccctctaccctaatcaaagaatcgtgatggaaatggggaaa
gatcatttggctgagagagtcttagatcttaccgcccccattggaaaaggacagcgggga
ttgattgtagccccaccaagatctgggaaaactgtcattctccaaagcatagcacacgcg
attgctgtgaataatcctgatattgttcttattgtcttgttaattgacgaaagacccgaa
gaagttaccgatatgattcggcaagttcgtggagaagttgttgcctcgacatttgacgaa
caaccagaaaggcatattcaggtcgctgagatggttatagagaaagctcgtcgtttagtg
gaacatggaaatgatgtggtcattctactcgattccataacacgattagcacgtgcctat
aatacagttcagccgcattctggaaaaattcttaccgggggtgtcgatgctagtgcattg
cacaaacctaagcgtttcttcggtgctgcaagaaatattgaaggcgggggatcgctcaca
attcttgcaaccgctttaattgatactggttccagaatggacgaagtgatttttgaagaa
ttcaaaggcactggaaatatggaactcgtcttggatcgacgtctgtcagatcgaagaacc
taccccgctattgatttaattaagagtggaactagaaaagaagaactcctctatcatcct
agtgaattagaaagggtctaccttttccgtcaggccatagcagatcttactactatagac
gccatgcatctcttgctaggaaggttgaagaaaaccaatagtaacgcagaattcttgttg
tcactcaaagaatag
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