Chiloscyllium punctatum (brownbanded bambooshark): 140453030
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Entry
140453030 CDS
T11285
Symbol
chd9
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 9 isoform X1
KO
K14438
chromodomain-helicase-DNA-binding protein 9 [EC:5.6.2.-]
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpun03036
]
140453030 (chd9)
Chromosome and associated proteins [BR:
cpun03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
140453030 (chd9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
HTH_CHD6-9
BRK
Helicase_C
Chromo
ResIII
HDA2-3
DEAD
Chromo_MIT1
HTH_CHD1_Hrp3
Motif
Other DBs
NCBI-GeneID:
140453030
NCBI-ProteinID:
XP_072403450
LinkDB
All DBs
Position
26:48540479..48798362
Genome browser
AA seq
2966 aa
AA seq
DB search
MTDPIMDFLDDANLFGGGLEGLADDGFSQAGPVSLVDELNLSADFEPLQVEPLHHVSETP
TSEKINFEQLQTFDSLKLHPENQPFNLVGGGAETSVLSPHSQFHCSPDHQQNQTNGLFPS
ANNDSSGQSFVDGSPMWGHQSPISNQNGSPFHTLQAHSQSVQPMTPFLTHHDFGLHQSSP
QQQQQQQQPASVQPQQNMNHFTTGQKVLNHGNQFMGAHSSASSHMTPLSQPTTTVSSSTQ
QHSASVQQFNQPTTALSMNAVHPVQFTSSANLTRVHQNVNFSNSSRELTPCSANSNQFTP
PYSYPSNNLANGNNLTSAAILSTHQVTQAMTCFPGSDTFTVAAGTNQEPVQHMLSPNSPA
KQKVLQPIHSVNTQGNFSSSSMPSVQTGVPITRSPASRVRLSNTSVQRKPTDLSALQGNP
LPHSQTHSLTRMNTNDFQGQLSAKFGSSGLGQRNSSPILRPAASRQLQQHPNKQQKMGNQ
QQMHQEPATISHTLSQHWQPSITSQHRQMKGSMQLTLQRQPPSSQTTIDSSRPQTTQIVK
LQNAQLMTGSKQLKKKEMQNKQEKANRIISEAIAKAKARGEQNIPRVVNPACLSTGSARK
EERKSNKCKTKQKDKESKKSRTGLCSKPKDRTKINKIIITLGKKRKNESSEEGSDTEQIP
TPSIKKESISGCQKRRSNRQVKRKKYNEDTGMKISDDDDGLTAKGKVKTGAVLPAEQPVQ
LFVENPSEEDAAIVDKVMASRLVKKEVAMGHMADVEEFFVKYKNYSYLHCEWATEAQLMK
DKRIHQKVNRFKIKQAQRGHFFAAMDDEPFNPDYVEVDRILECSCCEDTDTGEAVVYYLV
KWCSLPYEDSTWELREDVDQGKIEEFERLQQAKPSLKRMDRPPATAWKKLGQSREYKIGN
KLRDYQLEGVNWLLFNWYNRQNCILADEMGLGKTIQSITFLDEIFLTGIHGPFLIIAPLS
TIANWEREFRTWTDLNVIVYHGSMISRQMIQQYEMYFRDSEGRILRGTYRFHAMITTFEM
ILGGCPELNVIEWRCVIIDEAHRLKNKNCKLLEGLKIMNLEHKVLLTGTPLQNTVEELFS
LLHFLEPLRFSSEATFMQEFGDLKSEAQVQKLQAILKPMMLRRLKEDVEKKLAPKEETII
EVELTNIQKKYYRAILERNFAFLSKGAGQANVPNLINTMMELRKCCNHPYLIKGAEEKIL
GEFREMHNPVDPVFHLQAMIQSSGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYL
IQKRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDS
DWNPQNDLQAQARCHRIGQNKAVKVYRLITRNSYEREMFDKASLKLGLDKAVLQSMNGRE
NNVGGMQQMSKKEIEDLLRRGAYGAIMDEEDESSKFCEEDIDQILMRRTKTITIESEGRG
STFAKASFVASGNRSDIALDDPNFWQKWAKKAEIDLEAIHGRNSLVIDTPRVRKQTRPYN
AAKDELAELSEAESDGEDRPKLRRPYDRCHAYGRTECFRIEKNLLIYGWDRWKDILSHGR
FKRRLVEQDVETICRALLVYCLAHYRGDEKIKSFIWDLITPTEDGQTKELQNHLGLSAPV
PRGRKGKKVKIQGSSFDMQKAEWLRKYNPEHLLQDDGYKKHLKHHCNKVLLRVRMLYYLK
QEVIGDQLEKVLDGVDASEIDIWVPEPEQSEIPAEWWDMDADKSLLIGVFKHGYEKYNTM
RNDPALCFLERVGKPDEKAIAAEQRGNDTFADGAEGDGEDPEYKPTQPLFKDEMEDAASS
PGDLIITDCPLGEGDLLYWPTASALTTRLRRLVTAYQRSNKREQVKLEAQTKGDRRRRLC
ADTVKAKEAAKIEKQQRWTRREEADFYRVVSTFGVVYDPDKQKFDWTKFRAIARLNKKTD
ESLQKYLYAFIAMCRRVCRLPPKEKEELLDPPIFIQPITEERASRTLYRIELLRKVREQV
LRHPQLDERLQLCQPGPDLPEWWESGKHDKELLTGAAKHGVSKTDYHIFCDSELSFMMAQ
RNFSQNKVTQSRSSTPLLHPQYPSSASPLNLPAKLQDKKSQPETETAKCERTIVVKKEQS
SDDEDTMRAEVKNKVKSEHWNSMGGFQLQNRLEKKTGIKLDPDPDGCMVAARTQPLTPNS
VHNKRKANRGRSDSSSDSDSDSDNSSSSSSPSSSSSSSSSQSSSSSSSSSSSSSSSSSSS
SSSSSSSSSSSSSDDSDSDSDDKQTTAGCKSPQHLKTYDEDSVASLSITHDETQDSFLPD
SGKPDGPFLQERHRFAASCWPKDRVMINRIDSICHAVLKGNWIPSRRSYDYNAVTSSYTT
KLLDSPSAMGNFSDSATVTLGSQGAKEDNSLLSQFTKVKKHVREKEFTVKINDEGGLKLT
FQKQRLSQKRGLEAEEGTSDQQQYMARLHDLYSASDSSQELAVDLSKSLRGAGSSNSLPP
SVLFNSSLPGNTSTVISDPKSAIAGTSQQISRHCTNGVLLDGQPIVKKRRGRKKNVEGMD
ILFMNRSKSVQPANVELTNAEAALGVSQGQLDVDSPVSVINVKNGTRLTGEDAPKRRDLE
EWLKEHPDYVADVSSHVPKIVKTEILADRPKQKRHRCRNPNKIDVKSLTGEERVPVINRR
NAKKVGGSLAPPIKDLERWLQENPEFGIAPEWASVVKQSGYLPENMFDRILTGPVVREEV
SRRGRRPKSELTKAAAAAMTVNPLVANGLLAGMDLNSLQSLQQNLQNLQSLQLTAGLMGF
PAGLPSTGGETKSLTSMFPMMHSNMAGLPNIFGMGDLLTKSSETAPKDRKGSSTIDSFKP
TDGSNERTEKQNVDVCNEISVSSSAASSPRKVTPTTSASASVTSSGPLAINPLLLSSMLY
PGILLSPGLNIPIAGFPQTNIFDVQTNRNTDVTKPKPTKETVEHQEGTEQNSSHENSGDD
ASEKATSLSTSEDTTQPDDSDSSEED
NT seq
8901 nt
NT seq
+upstream
nt +downstream
nt
atgactgatcccatcatggattttttggatgatgccaatttgtttggtggaggattggaa
ggcttggcagatgatggcttttcacaagcaggaccagtttcattggttgatgagctaaac
ctaagtgcagattttgaacctttgcaggttgagccattgcatcatgtatctgagacaccg
acatcagaaaaaattaattttgaacagttacagacattcgattcactgaaacttcatcca
gagaatcagccatttaacttggtgggcggtggtgctgagactagtgtcctttccccacat
tcccagtttcattgttcaccagaccatcagcaaaatcagacaaatgggctattcccttct
gccaataatgatagtagtggccagtcattcgtagatggcagcccaatgtggggccaccaa
agccctatttcaaatcagaatggatcaccattccataccttgcaagcacattcacagtcc
gttcagccaatgactcccttcttaacgcatcatgattttggtctgcatcagtctagccca
cagcaacagcagcagcagcaacaacctgcatcagtgcagccccaacagaatatgaatcat
ttcactacaggtcagaaagttctaaatcatggcaatcagttcatgggtgcccacagttcg
gcttcatctcatatgactccgttgagccaaccgaccacaactgtaagttcatctactcaa
caacattctgcttcagtgcagcagtttaaccaaccaactacagctctgtccatgaatgca
gtgcatcctgtgcaattcaccagtagtgctaatctcactcgtgtacatcagaatgtgaac
ttttcaaactcatcacgagaattgactccgtgttctgctaattcaaatcagtttactcct
ccgtattcctacccgagtaacaacctagctaatggcaacaatttgacatctgctgcaatc
ctttcaactcatcaggtaacccaggctatgacttgcttccctgggagtgacacattcaca
gtggcagcagggaccaaccaagaaccagttcaacatatgctcagtcccaacagtcctgcg
aaacaaaaggttctccagcctatacattctgtaaacactcagggaaacttcagttcttca
agtatgccctctgttcaaactggcgtgccaataacaaggagtcctgcttctcgggtgaga
ctttctaacacatccgttcaaaggaaaccaacggacctttcagctcttcagggaaatcca
cttccacattctcagacacattcgttgaccaggatgaatacaaatgattttcaggggcag
ctgtcagcaaagtttggcagttcaggtcttggccaaaggaattcatcccctattttaaga
ccagcggcttcacggcagttacagcagcatccaaacaagcaacagaaaatggggaaccaa
cagcaaatgcatcaagagcctgctaccatcagtcacacactatctcaacattggcaacca
tcaataactagccagcatcggcagatgaaggggtccatgcagttgactttgcaacggcag
cccccttcctctcagaccaccattgatagttctcgtccacaaacaacacaaattgtcaaa
ttacagaatgcacagctgatgactggaagcaaacaactaaaaaagaaggaaatgcagaac
aagcaagaaaaagctaatcgcatcatatcggaagcaattgctaaggcaaaggcacgtggg
gaacagaatattccccgagtggtaaacccagcctgtttatccactgggtctgctcgaaag
gaggagaggaaatctaacaagtgcaaaacgaaacaaaaagataaagagtcaaaaaagtct
agaactggtttatgttctaaaccaaaggatagaacaaaaataaacaaaatcataataaca
cttgggaaaaaaaggaagaatgaatcgtcagaagagggctcagataccgaacagattccc
acaccatcgatcaagaaagaatccatttctggatgtcaaaagagacgatcgaacagacaa
gtgaaaagaaagaaatataatgaagacactggaatgaagatttctgatgatgatgatggg
ttaactgctaaaggaaaagtcaagactggtgctgttctacctgctgaacaacctgtgcaa
ttatttgtggaaaatcctagtgaagaagatgctgcaattgtagacaaagttatggcttca
agattagtgaaaaaggaggtagcaatgggacatatggctgatgttgaggagttctttgtg
aaatacaaaaattactcatacctgcattgtgaatgggccacagaagcacagttaatgaaa
gacaaaaggatacatcaaaaagtaaaccgcttcaagattaaacaggcacagagaggccat
ttctttgcagctatggatgatgagccttttaatccagactatgttgaagtggacagaata
ttggaatgctcgtgttgtgaggacacagatactggtgaggctgttgtttattatttggtt
aaatggtgctcattgccatatgaggatagtacctgggagcttagagaagatgtagatcaa
ggcaagattgaagagtttgaacgactgcagcaagcaaagccttccctgaaacgcatggac
cgtcctcctgccactgcttggaagaagcttggacaatccagggaatacaagattggtaat
aaactcagggactaccaattagaaggtgtcaattggctccttttcaactggtataacagg
caaaactgcattctcgctgatgaaatgggtttaggcaagaccatccagtctattacattc
cttgatgaaatttttctgactggaatccatggtccttttctcatcattgcgcctttgtct
acaattgcaaactgggaaagagaatttcgcacgtggacagacctgaacgtcatcgtttat
catggcagtatgattagcaggcagatgattcaacagtatgaaatgtatttccgggactca
gagggccggattcttcggggaacctacaggttccatgccatgataactacatttgagatg
atcctgggtggttgtccggagctaaatgtaattgaatggcgatgtgtcattattgatgag
gctcacagactgaagaataaaaattgcaagctactggagggattgaaaattatgaatctg
gaacacaaggtcctgctgacagggactcctctgcagaacactgtggaggaattgtttagt
ttgcttcatttcttggagcccctacgtttctcatcagaagccaccttcatgcaggaattt
ggagacctaaaaagtgaagcacaggtgcagaagcttcaggcaatactgaagccaatgatg
ctgcgacgtctgaaggaggatgtagaaaagaagcttgctccgaaagaagagacaattatt
gaagtagaattaaccaatattcagaagaaatactatcgtgcaatcctggaacgaaacttt
gcttttctgtccaaaggagctggtcaggcaaatgttcctaacctgataaacacaatgatg
gaactcaggaaatgctgtaatcacccatatctgataaaaggtgctgaagaaaagattctg
ggagagttcagagagatgcacaatccagttgatccagtcttccatctgcaagctatgatt
cagtcatctggtaaacttgtcttaattgacaagctgctcccaaagatgaaagctggtggt
cacaaagttctcatcttctcccagatggtgcgctgccttgacatacttgaggactatctt
attcaaaaaaggtatccgtatgagcgtattgacgggagagttcgaggaaacttacgacaa
gcagcaattgaccgatttagcaagcctgactctgaccgctttgtgttcttactgtgtaca
agagctggtggattaggcatcaatctaacagcagcagatacttgtatcatatttgattca
gactggaatccacagaatgacctccaggctcaagctcgatgtcacaggattggtcagaac
aaagctgtaaaagtttacagactaataactcggaattcgtatgaacgggagatgtttgac
aaggcgagtctgaagttgggtcttgacaaagctgtgctgcagagtatgaatggacgggaa
aacaatgttggtgggatgcagcaaatgtccaagaaagaaatagaagacttgcttcgtcgc
ggtgcctatggtgcaataatggatgaagaagatgagagttctaaattttgtgaagaggac
attgatcagattctcatgcgacgcacaaagacaattactatagaatcagaaggaagaggt
tccacatttgcaaaggcaagttttgttgcatcaggcaacagaagtgacattgctttggat
gatcctaacttctggcagaaatgggcaaagaaagcagaaattgatctcgaagccatacat
ggaaggaacagcttagttattgacacaccaagagtaaggaaacaaaccagaccttacaat
gctgctaaagatgagctggcagaattatcagaagcagagagtgatggtgaagatagacca
aagctacgcaggccctatgaccgatgtcatgcatatggaagaacagagtgctttagaatt
gagaagaatctgctaatttacgggtgggatcgctggaaagacattctatcacatggacgg
tttaagagacggctggtggaacaggatgtggagacaatctgtcgtgcactcttagtatat
tgccttgctcactacagaggagatgaaaagatcaagagtttcatctgggacctcattact
ccaacagaggatggccagacaaaggaactgcaaaaccacctagggttgtctgcaccagtt
ccaagaggcaggaaagggaagaaggtgaagatacaaggaagctcatttgatatgcagaag
gctgagtggctcaggaaatataacccagaacacctgctccaagatgatggctacaaaaag
catttaaaacatcactgcaataaggtactgctgcgagtaagaatgttgtactatctgaaa
caagaagtaatcggtgaccagttggaaaaagtacttgatggagtggatgcaagtgaaatt
gacatttgggttcctgagcctgagcagtctgaaatacctgctgaatggtgggacatggat
gctgacaaatcgctgctcatcggagtcttcaagcacggttatgaaaagtataatacaatg
agaaatgaccctgcactctgtttcttagaaagagttggcaaacctgatgagaaagccatt
gcagcagagcagaggggaaatgatacttttgcagacggtgcagagggggatggtgaagat
ccagaatataaaccaactcagccattattcaaggatgaaatggaggatgctgcatcttct
ccaggagatctaataattacagattgccctctgggagaaggtgatctactctattggcca
actgcatcagctttaacaacgcgcctgcgtcgacttgtaactgcttatcagcgtagtaac
aagagagagcaggttaaactggaagcccaaactaaaggagatagaagaaggcgactttgt
gctgacactgtaaaagccaaggaggctgctaaaatcgagaagcaacaaaggtggactagg
cgagaagaggctgatttttacagggtcgtgtctacttttggtgtcgtttatgatccagac
aagcaaaaatttgattggactaaattccgagctattgccaggttgaataaaaagacagat
gagagtctacagaaatacctttatgctttcatcgctatgtgtcgaagagtttgccgttta
ccacccaaagagaaagaagagcttcttgatccacccattttcatacagcctattacggag
gagcgtgcttccaggacattatataggattgagcttctccgtaaagtgcgggaacaagta
cttcgacatcctcagcttgatgaacggttacagttgtgccaaccaggcccagatctgcca
gagtggtgggagagtggaaagcatgataaggaattgctcactggagcagccaaacatggt
gtcagcaagactgattatcacattttctgtgattcagagctttcctttatgatggctcaa
agaaacttcagccagaacaaagttacacaatctaggagttccacaccactcttgcaccct
cagtatccatcttcagcctcacctcttaatttaccagctaagctgcaagataaaaaaagt
caacctgagactgaaaccgcaaagtgcgaaagaacaatagttgtaaaaaaggaacagtca
tctgatgatgaagatacaatgcgcgctgaggttaaaaataaagtgaaatcagaacactgg
aattctatgggtggttttcagctacaaaaccgattagaaaagaagactggcattaaactg
gacccagatccagatggatgtatggttgcagcaaggactcaaccccttacaccaaactct
gtacacaacaaacggaaagcgaacagaggacgttctgattcgagttccgattcagactct
gattcagacaattcttcttcttcttcttcaccgtcgtcgtcatcatcgtcgtcatcatca
caatcctcatcttcctcctcctcttcgtcgtcgtcatcctcttcgtcctcatcatcctct
tcatcttcctcctcctcctcttcttcatcgtcctcttctgatgatagtgatagtgacagt
gatgataagcaaaccacggcaggttgcaaatccccacagcacttgaaaacctacgatgaa
gacagtgtagcatctcttagcatcacacatgatgagacacaagacagctttctgccagat
agtggaaagcctgacggtcccttcctccaagaaaggcataggtttgctgcctcctgctgg
cccaaggatcgtgtcatgatcaacagaattgatagtatatgccatgcagtgttgaaagga
aattggattccatcaagaagaagttatgattacaatgctgtgacctcttcttacacaaca
aaactgctggatagcccttctgccatgggaaatttcagtgattctgctactgtaacattg
ggaagccagggtgctaaagaagataattctctcttgtcgcagttcacaaaggtgaagaag
catgtgcgagaaaaggagtttacagtgaaaatcaatgacgaaggtggattgaagttaact
tttcagaaacaaaggctcagtcagaaaagaggacttgaggctgaagaaggaacttcggat
cagcagcaatacatggcacggttgcatgatttgtactctgcttctgacagcagccaggaa
ttggctgtggacctttccaaatctttacggggagctgggagctccaactctttgccgccg
tcggtattattcaattccagtttgcctggcaacacctccacagtgatctcagatcccaaa
tcagcaatagcaggtacttcacaacagatctcaagacactgtactaatggggtcctattg
gatggccagccaattgttaaaaagagaagaggacggaaaaaaaatgtggagggaatggac
atcctcttcatgaaccgaagcaaatcagtacagcctgctaatgttgagttaaccaatgca
gaggcagctctcggtgtatctcaagggcaacttgatgttgatagtcctgtttcagttatt
aatgtgaaaaatggcacaagactcacaggagaggatgctccaaaaagaagggatttagaa
gagtggctcaaggagcatccagactatgtggcggatgtgtcatcgcatgttccaaaaatt
gttaaaactgaaattttggctgatagaccaaagcaaaaaagacatcgatgcagaaaccct
aacaaaatagatgtcaaaagtctgactggagaagaacgtgtacctgttataaatagaaga
aatgccaaaaaggtgggtggctcactggctcctccgattaaagacttggagaggtggctg
caggaaaatcccgagtttggaattgctccagaatgggcaagtgtagtaaagcagtcgggg
tatttaccggaaaatatgtttgaccgcatcctcacaggacctgttgtgcgagaagaggtt
agtcgaaggggtagacgtccaaaaagtgagctcaccaaagctgctgctgcagctatgact
gttaaccccctagtcgccaatggccttcttgctgggatggacttaaacagcctccaaagt
ttgcaacagaatctccagaatttacagtctttgcaattgacagctggattgatgggattc
cctgcaggccttccatctacaggtggagagacaaaatccctgacttccatgtttcctatg
atgcattcaaatatggcagggttacctaatatatttggtatgggagatttactaactaaa
tcctcagagactgctcccaaggacagaaagggaagtagcactatagattccttcaagcca
acagatggatcaaatgaaaggacagagaaacaaaatgtggatgtttgtaatgaaatctca
gtgtcaagttctgctgcgtcttctcctaggaaggttacaccaaccacaagtgcttctgcc
tcagtaacatccagcggtcctctggctattaatccactgttattgtccagtatgctttat
ccaggcattctactctctccaggccttaacataccaattgcaggattccctcagactaat
atctttgatgtacagacgaatagaaatacagatgtaaccaagcccaagcctacaaaggaa
acagtagaacatcaagagggaacagaacagaattcttcacatgaaaatagtggagatgat
gcatctgagaaagcaacatcattgtctactagtgaagatacaactcaaccagatgattca
gattccagtgaagaagactga
DBGET
integrated database retrieval system
