Chiloscyllium punctatum (brownbanded bambooshark): 140453165
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Entry
140453165 CDS
T11285
Symbol
sf3b3
Name
(RefSeq) splicing factor 3B subunit 3 isoform X1
KO
K12830
splicing factor 3B subunit 3
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140453165 (sf3b3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpun03021
]
140453165 (sf3b3)
03041 Spliceosome [BR:
cpun03041
]
140453165 (sf3b3)
03036 Chromosome and associated proteins [BR:
cpun03036
]
140453165 (sf3b3)
Transcription machinery [BR:
cpun03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
140453165 (sf3b3)
Spliceosome [BR:
cpun03041
]
Complex A
U2 snRNP components
U2 snRNP specific factors
140453165 (sf3b3)
Complex B
140453165 (sf3b3)
Complex C
U2 SnRNP specific factors
140453165 (sf3b3)
Chromosome and associated proteins [BR:
cpun03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
STAGA complex
140453165 (sf3b3)
TFTC complex
140453165 (sf3b3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
140453165
NCBI-ProteinID:
XP_072403728
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Position
26:71721926..71782454
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AA seq
1217 aa
AA seq
DB search
MFLYNLTLQRATGISHAIHGNFSGTKMQEIVVSRGKILELLRPDANTGKVHTLLTVEAFG
IIRSLMAFRLTGGTKDYIVVGSDSGRIVILEYQPSKNIFDKVHQETFGKSGCRRIVPGQY
LAVDPKGRAVMIGAIEKQKLVYILNRDAAARLTISSPLEAHKANTLVYHVVGVDVGFENP
MFACLEMDYEEADSDPTGEAAANTQQTLTFYELDLGLNHVVRKYSEPLEEHGNFLITVPG
GSDGPSGVLICSENYITYKNFGDQPDIRCPIPRRRNDLDDPERGMIFVCSATHKTKSMFF
FLAQTEQGDIFKITLETDEDMVTEIRLKYFDTVPVSTAMCVLKTGFLFVASEFGNHYLYQ
IAHLGDDDDEPEFSSAMPLEEGDTFFFQPRPLKNLVLVDELDSLSPILTCQIADLANEDT
PQLYVACGRGPRSSLRVLRHGLEVSEMAVSELPGNPNAVWTVRRHVEDEYDAYIIVSFVN
ATLVLSIGETVEEVTDSGFLGTTPTLSCSLLGEDALVQVYPDGIRHIRADKRVNEWKTPG
KKTIVKCAVNQRQVVIALTGGELVYFEMDPSGQLNEYTERKEMSTDVVCMSLANVPPGEQ
RSRFLAVGLVDNTVRIISLDPSDCLQPLSMQALPAQPESLCIVEMGGAEKQDELGEKGSI
GFLYLNIGLQNGVLLRTVLDPVTGDLSDTRTRYLGSRPVKLFRVRMQGQEAVLAMSSRSW
LSYSYQSRFHLTPLSYETLEYASGFASEQCPEGIVAISTNTLRILALEKLGAVFNQVSFP
LQYTPRKFVIHPESNNIIAIETDHNAYTEATKAQRKQQMAEEMVEAAGEDERELAAEMAA
AFLNENLPESIFGSPKAGSGQWASVVRIMNPIQGNVYDQIQLEQNEAAFSIAVCKFGNGG
DDWYVLVGVGKDLILNPRSVGGGYIYTYKLINSGEKLEFVHKTSIEDVPTAIAPFQGRVL
VGLGKLLRIYDLGKKKLLRKCENKHIPNFIVAIHTIGHRVIVSDVQESFFWIRYKRNENQ
LIIFADDTLPRWITTACLLDYETMAGADKFGNISVVRLPPNTSDDVDEDPTGNKALWDRG
LLNGASQKAEIIVNYHVGESVLSLQKTTLIPGGSESLVYTTLSGGIGILVPFTSHEDHDF
FQHLEMHMRSEHPPLCGRDHLSFRCYYFPVKNVIDGDLCEQFNSMDPIKQKSVAEELDRT
PAEVSKKLEDIRTRYAF
NT seq
3654 nt
NT seq
+upstream
nt +downstream
nt
atgtttttgtataacctgactctccagagagcaactggcatatcacatgccattcatgga
aacttttcaggcaccaaaatgcaagagattgttgtgtctaggggaaagatcttggagttg
ctccgtccagatgcaaatactggaaaagtacatacgttgctgacggtggaggcctttggg
ataattcgttctttgatggccttccgtttaactggaggcaccaaagattacatagtagtg
ggtagtgactctggtaggattgttatcctggagtatcaaccatccaagaatatttttgat
aaggtccatcaggaaacctttgggaagagcggatgtcggcgtattgtacctggacagtac
ctggcagttgacccaaaaggtcgtgctgttatgatcggtgctattgagaagcaaaagttg
gtctacattctgaacagggatgctgctgctcgcctcaccatctcctcccctttagaagcg
cacaaagcaaatacgttggtgtatcatgtcgttggtgtggacgtggggtttgaaaatcct
atgtttgcttgtcttgagatggactatgaggaggcagacagtgatcctactggtgaagca
gctgctaacactcaacagacattgacattctacgagttggatctgggtctgaaccatgtt
gtgagaaagtacagtgaacctctggaggagcatggcaacttcctaattacagttccagga
ggctcagatgggccgagtggtgtactaatctgttccgaaaactatatcacttataaaaac
tttggagaccagccagacatccgatgccccatccccaggaggaggaatgacctggatgat
cctgaacgaggaatgatttttgtctgctctgctacgcataaaacaaagtccatgttcttc
ttcctggcacagactgaacaaggcgacatcttcaaaattacactggaaacagatgaggac
atggtgactgaaatcaggttgaagtattttgacactgtccctgtgtcaactgccatgtgt
gtactgaagactgggttcctctttgtcgcatcagaatttggcaatcattacctttatcag
attgcacatcttggagatgatgatgatgaaccagagttctcttcagcaatgcccttagag
gagggagatacatttttctttcagccacgacctctcaagaatctggtattggtggatgag
ttggacagcctttcaccaattttaacatgtcagattgctgatctggctaatgaagacaca
cctcagctatatgttgcctgtgggagagggccgcggtcgtcattgagagtcttgaggcat
ggtcttgaggtatcagaaatggctgtttcagagctgcccggtaacccaaatgctgtatgg
actgtgagaagacatgtggaagatgagtatgatgcatacatcattgtgtctttcgtgaac
gccacgctggtactgtctattggtgagaccgtagaggaagtgacagactctggatttctg
ggtacaacccccacactgtcctgttccttgcttggtgaggatgcactggtccaggtgtat
cctgatgggatccgtcatatccgtgctgataagagagtcaatgagtggaagacccctggt
aaaaagacaattgtgaaatgtgctgtgaatcagcgccaggtggtgattgctctgacaggc
ggagaactggtctactttgagatggatccgtctggacaactgaatgagtacactgaacgg
aaagagatgtcaactgatgtggtctgcatgagtttagcaaatgtacctccaggggagcag
cgttctcgatttctggctgttgggctcgtagacaacactgtcagaatcatttctctggac
ccttcggactgcctgcagcctctcagtatgcaagctcttcccgcacagcctgaatctctc
tgtatagttgagatggggggtgcagagaaacaggatgaactgggagaaaagggttccatc
ggttttttgtacttaaacattggtctacagaacggagtattattaaggacagtattggac
ccagtcactggagacttgtcagatacaaggacccgatatctcggatcgcgacctgtcaag
cttttcagggttaggatgcagggacaagaagcggttttggccatgtcaagtaggtcctgg
ttgagctactcataccagtctcgtttccacctgacacctctgtcctatgaaactctcgag
tatgcatctggctttgcctcggagcagtgtcctgagggtattgtggcaatctccaccaac
acactgagaatcttagcccttgagaagctgggagcggtattcaatcaagtttccttccct
ctgcagtataccccgaggaagtttgttattcacccagaaagcaacaacatcatcgccatt
gagactgatcataacgcctacacagaagccaccaaagcccagcgtaaacagcagatggct
gaggaaatggtggaagcagctggagaggacgagcgagaattggcagcagagatggcagct
gccttcctgaacgagaacttgcctgaatccatttttggatccccaaaggcagggagtggg
caatgggcatctgttgttcgaataatgaaccccatccaaggcaatgtgtatgatcagatc
cagttggaacaaaacgaagcagcattcagtattgctgtttgtaagtttgggaatggtggt
gatgattggtacgtgctggtaggggttggcaaggacctaattctcaatcctcgctcagtt
ggaggcggatatatttacacctacaaacttataaacagcggagagaagctagaattcgtg
cacaaaacatccattgaagatgttccaacagccattgccccttttcaaggccgtgttctg
gttggtttggggaaactcctgcgcatctatgatctagggaagaagaagctgctgaggaaa
tgtgaaaataagcatattccaaatttcatagtggcgatccacaccattggacacagagtc
attgtctccgatgtacaggagagcttcttctggattcgttacaaacgcaatgagaaccag
ctgattattttcgctgatgacacattaccccgctggatcaccacagcttgtctgctggac
tatgaaacaatggctggtgctgataaatttggcaatatcagtgtggtgagattgcctcca
aacaccagtgatgatgttgatgaggatcccactgggaacaaagcattgtgggatagaggt
ctacttaatggagcttcccagaaggctgagatcattgttaattatcatgtgggagagtca
gtcctttcattacagaagaccacgttaattcctggtggttcagaatcgcttgtgtacaca
accttgtctggaggcattgggatcctagttccattcacatcacatgaggaccatgatttc
ttccaacacctggagatgcacatgagatcagaacaccctccactgtgtggtcgtgaccac
cttagtttccgctgttactacttccccgtgaagaatgtaattgatggcgacctgtgtgaa
cagttcaactcaatggatcccataaaacagaaaagtgtggcagaggaactggaccgaaca
cctgctgaggtgtccaaaaaactggaagacatccgaacacgttatgcattttag
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integrated database retrieval system
