Chiloscyllium punctatum (brownbanded bambooshark): 140453175
Help
Entry
140453175 CDS
T11285
Symbol
trim71
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpun03019
]
140453175 (trim71)
04121 Ubiquitin system [BR:
cpun04121
]
140453175 (trim71)
Enzymes [BR:
cpun01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140453175 (trim71)
Messenger RNA biogenesis [BR:
cpun03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
140453175 (trim71)
Ubiquitin system [BR:
cpun04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
140453175 (trim71)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
zf-B_box
SGL
ANCHR-like_BBOX
DUF5711
zf-C3HC4
PspA_IM30
zf-RING_UBOX
zf-RING_5
zf-RING_2
zf-C3HC4_2
TXNDC16_N
Motif
Other DBs
NCBI-GeneID:
140453175
NCBI-ProteinID:
XP_072403763
LinkDB
All DBs
Position
26:complement(75166845..75209319)
Genome browser
AA seq
964 aa
AA seq
DB search
MWISRSLQRGAVLAEEAERLPSSRPPPPPAPELAQGRFYPRCFQRSDAAMAAPFCGSEQQ
QQQAAAAAPPPPAPPPPPPPPPPAAAAASSSSSSPSQGPAPGGRPEAQLQPQCGLCRARG
LGPGPRCRGSAAADELRLLPCRHSFCQACLEAHAGAGGAARRPRRGGGAGGPPAAAHRRL
QPGNGPGPESEAAAASTVNSSSASSSSSSSSSSSSCSTSERLSCPICERLMPGASASSDN
EPGLPAELLLLNNLLDVVSAAEDELDGGGGAGGAAGGGRGRARPRSSQAGAGGGGGGCSS
CDEGAPVTSRCLDCAEYLCDRCVRAHQRVRLTKEHAIHRFRQQQPPPPQPQPQPHYNQQP
FASLPIAHERVSYCQQHENEVMRLYCDTCAVPICRECTMSRHVGHSFVYLQDAVQDSKEI
TLQLLADAQQGRQAIQLSIEKVRAMVEQVEMKAQVIRSEVKAVTSRHKKALEERECDLLR
KVEKIRQMKAKTLHLQVEALRENLTRLESTIDCVQKALLDGRDVDVLLAKEQMFVQIQDL
KKLRNLLQPQDDDTLSFIPPDGVLYKAIKSLGIISSSAYAPISTATGEGLKRALRGKMSS
FTVITKDHTGEGRSSGGDLVVVVIMGPDGCLFRADVLDHHDGTYTVSYSPHLEGEHVVSV
TIRGQHIENSPFRVIVKAGRNYSGIGLPICSFGGEGDEDGQLCRPWGVCVNKEGYIIIAD
RSNNRVQVFTPSGTYHHKFGTAGARPGQFDRPAGVACDQNCRIVVADKDNHRIQVFTFEG
QFILKFGEKGSKNGQFNYPWDVAVNTDGKILVSDTRNHRVQLFGPDGNFVSKYGFEGALW
KHFDSPRGVAFNHEGHLVVTDFNNHRLLVIHPDFQSARFLGSEGTSNGQFLRPQGVAIDQ
EGRIIVADSRNHRIQIFEPNGNFLCKFGTQGSGFGQMDRPSGIALMPDGLIVVVDFGNNR
ILLF
NT seq
2895 nt
NT seq
+upstream
nt +downstream
nt
atgtggatttcccggtcgctgcagaggggagcggttctcgctgaggaagccgagcggctg
ccctcgtcccggccgccgccgccgccggcccccgagctggcccagggccgcttctacccg
cgctgtttccagcgctcggacgccgccatggccgcccctttctgcggctccgagcagcag
cagcagcaggcggcggctgctgctcctcctccccccgctccccctcctcctcctccaccc
cctcctccggcggcggcggccgcctcctcctcctcctcctccccctctcagggcccggct
cccggcggcaggcccgaggcccagctccagccccagtgcggcctgtgccgtgcccgcggg
ctgggcccggggcctcgctgccggggctccgcggcggccgacgagctgcgcctgctgccg
tgccgccactccttctgccaggcctgcctggaggctcacgctggcgccggcggggctgcc
cggaggccgcggcggggagggggagcaggggggccgcctgccgccgctcaccggcgcctc
cagcccggcaacgggcctggcccggagtccgaggccgccgccgcctcgacggtcaactcg
tcttccgcgtcgtcgtcgtcgtcctcctcctcgtcgtcgtcgtcgtgctccacctcggag
cggctgagctgcccgatctgtgagcgcctgatgcccggcgcctcggcttcctccgacaac
gagccgggcctcccggccgagctgctgctgctcaacaacctgctggacgtggtgtcggcg
gccgaggacgagctggacggcggagggggggcaggaggagcggcgggagggggcagaggc
cgtgcccggcccaggagctcccaggccggggccgggggtggaggtggaggctgcagctcc
tgtgatgaaggcgccccggtcacctcccgctgcctggactgcgccgagtacctgtgcgac
cgctgcgtgcgggcccaccagcgggtccgcctcaccaaggagcacgccatccaccgcttc
aggcagcagcagccgcccccgccccagccccagccccagccccactacaaccagcagccc
ttcgccagccttcccatcgcacacgaacgggtcagctactgccagcaacacgagaacgaa
gtgatgcgtctgtactgtgatacttgcgctgtcccaatttgtcgagaatgcacaatgagc
cgtcatgtagggcacagctttgtctacctccaggatgccgtacaggactccaaagaaatt
accctacagttattagcagatgcacagcaaggacgacaggcaattcagctcagtatagag
aaagtcagagctatggtggaacaagtagagatgaaagctcaagtgattcgatcagaagtc
aaagcagttacttcgcggcacaagaaggctctagaggaacgtgagtgtgacctgttgaga
aaggttgaaaagatccggcagatgaaggccaaaaccctgcaccttcaggtggaagcattg
cgtgagaatttaaccaggctggaaagcactatagattgtgttcagaaagccttattggac
gggcgtgatgtggatgttctcttggcaaaagaacaaatgtttgtccaaatccaagacttg
aagaaacttcggaatctcctacaacctcaagacgatgacaccctttcgttcattccaccc
gatggtgtgctgtacaaagccatcaagtcactgggcataattagtagcagtgcatatgct
ccaatatctacagcaactggtgaaggattgaaacgggcattacgtgggaaaatgagcagt
ttcactgtaatcacaaaggatcacactggtgaaggaagatcatctggtggtgacttggta
gtggttgttatcatgggtcctgatggctgtctctttcgtgctgatgttctcgatcatcac
gacggcacctacacagttagttattccccgcatctggaaggagagcatgtagtctcagtg
acaattcgtggtcagcatattgagaacagcccttttcgagtaattgtcaaagcaggtcgc
aattattctggaattgggcttccaatttgctcctttggaggagaaggggatgaagatgga
cagctttgccgaccatggggtgtctgtgtcaacaaagaaggctatattatcatcgctgat
cgtagcaacaaccgtgttcaggtattcacaccaagcggaacctatcaccacaagtttggg
acagcaggagccaggcctggacagtttgatcgtcctgctggagttgcctgtgatcagaat
tgtcgcatcgtagtggctgataaggacaatcaccgcattcaggtgttcacctttgagggg
cagtttatccttaaatttggggagaaaggaagcaagaatggccagttcaactacccttgg
gatgttgcagtcaatactgatgggaagatcctagtgtctgacactcgcaatcatagagtt
cagctttttggcccagatggaaattttgtaagtaaatatggctttgagggagcattgtgg
aagcactttgattctcctcgtggagtggcctttaaccatgaaggacaccttgtggttaca
gatttcaacaaccaccggctgctggtaatccatcctgacttccagtctgcacgtttcctt
ggctctgaaggcacaagtaacggtcagttcctccgacctcagggtgtagctattgaccaa
gaaggccgcatcattgtagctgattccaggaaccatcgcattcaaatctttgaaccaaac
ggcaatttcctgtgtaagttcgggacccaaggcagtggctttggacagatggatcgtcca
tccggaatagccctgatgccagatggactgatagtagtcgtcgactttggcaacaatcgt
atcctcttgttttaa
DBGET
integrated database retrieval system
