Chiloscyllium punctatum (brownbanded bambooshark): 140453232
Help
Entry
140453232 CDS
T11285
Name
(RefSeq) polycystin-1-like protein 2
KO
K04988
polycystin 1L2
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
cpun04040
]
140453232
04091 Lectins [BR:
cpun04091
]
140453232
Ion channels [BR:
cpun04040
]
Voltage-gated cation channels
Transient receptor potential channel (TRP)
140453232
Lectins [BR:
cpun04091
]
C-Type lectins
Others
140453232
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PKD_channel
Polycystin_dom
PLAT
Ion_trans
GPS
PKD
RNA_pol_Rpb5_C
DARPP-32
Motif
Other DBs
NCBI-GeneID:
140453232
NCBI-ProteinID:
XP_072403908
LinkDB
All DBs
Position
26:30676991..30790270
Genome browser
AA seq
1751 aa
AA seq
DB search
MRKHRSFTMAHLYNALGVYSISIECKNSKDVWAIGKSKIVLEPVNKPNGLQCYSPSLLDT
IRNCAVQYGDTLWIQTEKENGFNLAYTMSIGNTTLHASTLIPGVIVIDGSSQSLIGPGQH
SVTVYARNSSIEISQNLTILLLLKISGLKAELEPHALKLGNNVTIKVSVSQGSPISLQFD
FIDSHNILSYTAKSSNGQLPVYTFLMQKEGTFLVMVTATNILSTEQFIVGHVMVTNDFSK
RSTAIRKRALPNVIEDTLQKFSGIAINASSLQGVETATTYLDMITSHPDKLTVRSQEEAN
NALLNLSDKLQNLPTIKPSDELWKLYGAKTGLNAVNNLLSASMKTNSFDVEEEKMANMFD
VLLTSMDKIFSSLESQIQEDDPPTVFQASSFSMALKRYSSKNLKGSRIDTLETNSFSCIF
PDSIDLQSISNKSVQLRILLPRSNSTQLFPATYTTAMNLVFHRFHVTDPESAIVISVESN
PVTSTQLYFKHASKPNETLYEFEKSFFPQSSTSVEAYSCVITSEMLMGRNGTYYLAAKPL
QQSTAPEANITFTISTISTKCLYWDEMRHRWSTHGCKVGPKSNLNKTQCLCNHFSLFATS
LLVLPNTVDVMETVKLFSQIKDNSVVVSLLAAVFGVYIILVIWTRMKDRQDLMKVKKTVL
ADNDPFAKYHYLVKVFTGHRRGAGTTSKVVMMLYGSAGQSDSHHLTDPKKPVFQQGSVDE
FLLATPFPLGNLTSIRLWHNNSGSSPSWYINHVIVQDPETGKQWYFFCNCWLAVDAGQFV
LDKTFHLASEAEMKDFSNLFFIKTSESFTDQHIWFSIFARPPRSSFTRVQRVSCCFSLLL
CTMLTNIMFWGTADNGTEQEEQLDDHIIGLREVIIGIESALIIFPVNLIIVQIFRNTHPK
STDISATLNKSASDDPSECQRTPENIMMMVVVIDLEGIVEEVLDIKRIASSLPGKLKDAM
PTLEDDIRNANDINKLLVLIANIIQHCNEQSDTQEAPIPDNATCSPDQQNEDNNSMVSNP
EDNNSTRSDPEKETDQMMKHFLHYVSHLLNYVETELQEMELKTFQNPYTQIHATDQVQKI
IQFIKAAINSADANHITKRSKKTSPVSKGLPWWFIYIGWLLVFVTSSVSAFFTMLYSFDY
GKEKSIQWLKSMIVSFVESVFIIQPLKVLFVAAFIALIVKKVERNENEESYNENLLSTIN
EDLNVVTPNYTKRSDAGIYKPPSVKHVEKMKAQHLKEKKMYDFIKDIFAHVGFLVVLAII
AYGERSPHSFYLNKALNDSFTRKFNGSLAVNDFYIWANEILLPNLYGPYEGFITDGNSKL
LGSPRIRQVRIKPTPCPVPTRLVDSIQECRAPYSYGDEDMLDFGSKGNFSVNTESLWLAS
AWHYQSESQLKGYPVWGKIALYRGGGFVAELGTENKTADRIINYLKENTWVDMYTRAIFV
EFTVYNANVNLFCVVTLMLEMNAIGVFLGNMQMEIIRLYHYVDQNYSSIIGAQVVFIIIV
IYYMVKQGKLLKQKRMKYFCDKWNLINLAIILCSCSALGLYIKRAVLGTRVMNDYLKNQD
RFVNFYGTAITDSSLGYVIAFLVSLATVKLWNLLRLNPKMHLITSSLQRAWSNLLGLLVI
LMVLLIAYSSVCYLVLGLYLSSYRTFSTAVITIIHLLLGAFNYNEVLQTYPFLGAIIIST
CVIIMTFILINIFISALLMSFSEERHHPMPSEDEEIIDLLLVKLCNIIGIQRKGKEEPPS
NAEEMAFVQEK
NT seq
5256 nt
NT seq
+upstream
nt +downstream
nt
atgcggaagcatcggtcgtttacaatggcacacctgtacaacgctttaggtgtttattcc
atctccattgaatgtaaaaacagcaaagacgtttgggcaattggcaaatccaaaattgtg
ttggagccagttaataaacctaatggcttacagtgttacagtcccagtctactggacaca
attcgtaactgtgcagttcagtatggtgacacattgtggattcagacagaaaaagagaat
ggtttcaacttggcttatactatgtcaattggaaataccactcttcacgcatctactctg
ataccaggagttattgttatagacgggtcttcgcagtcccttattggaccaggtcaacac
agtgtgactgtttatgcacgaaatagctccatagagatatctcaaaacttaacaattctt
ctacttctcaagatcagtggtttgaaggctgagttggaaccacatgccctgaaactgggc
aacaatgtcaccataaaggtctctgtatctcagggttcaccaataagtttgcagtttgac
tttatcgattctcacaacattttgtcttatacagcgaagagttctaatggtcaacttcca
gtttatacatttttgatgcagaaggaaggtacatttctcgtgatggtaactgctacaaat
atcttatctaccgagcagtttattgttggccacgtcatggttacaaatgatttctctaaa
aggagcactgcgattaggaaaagagccttacccaatgtgattgaggacaccttgcagaaa
ttttctgggatagcaataaatgcatcctccctgcagggagtagagactgcgactacttat
cttgatatgatcacctcacaccctgataaactgactgttagatcacaggaagaagctaat
aatgcactcctgaacctgagtgacaagttgcagaatcttcctactataaaaccgagtgat
gaactgtggaagctatatggagcaaaaactggtcttaatgcagttaacaatcttctaagt
gcttcaatgaaaacaaatagttttgatgtggaggaagaaaagatggcaaatatgtttgat
gttctcctaacatctatggataaaatattttcatcccttgagagtcaaattcaggaagat
gaccctccaactgttttccaggcatcatccttcagtatggctttaaaaaggtacagttca
aagaacttaaaaggaagcaggattgataccttagagacaaattcatttagttgcattttc
ccagattctattgatctgcagagtatttcaaataaatcagttcagttaaggattttactg
cccagatcgaactcaacccaactcttcccagctacatataccacagctatgaacctagtt
ttccataggttccatgtaactgatccagaatcagccattgtgatctctgtagaaagcaat
ccagttacttcaacacaactgtacttcaaacatgcttccaagcccaatgagacactatat
gagtttgaaaaaagcttctttccacagagcagcaccagtgttgaagcctacagttgtgtc
ataacatctgaaatgttaatgggcaggaacggtacttattatttagcagccaagcctctc
caacagtcaactgctccagaggccaacataactttcacaataagtaccatcagtactaaa
tgcttatactgggatgagatgcggcatcgatggtcaacccatggatgtaaggtgggtcca
aaatcaaatctaaacaaaacccagtgtctttgcaaccatttcagtttgtttgctacctct
ttactggtcttgccaaatacagtggatgtcatggaaactgtcaaattattttctcaaatc
aaagacaactctgtagtagtctcattattggctgctgtttttggagtttatatcatctta
gtcatttggactcgaatgaaagatagacaggatttaatgaaggtgaagaaaactgtgctt
gcagataatgatccatttgccaaataccattacttggtaaaagtcttcacaggtcatcga
agaggagcaggcactacatctaaggtagtaatgatgctgtatggttcagcaggccaaagt
gactcccatcacctgactgatccaaagaaaccagtctttcaacaagggtcagtggatgag
tttctccttgctactccattcccattgggcaacctcaccagcattagactgtggcacaat
aattcaggatccagtccatcctggtacatcaatcatgtaattgtacaagatccagaaaca
gggaagcaatggtactttttctgcaattgctggttagctgttgatgctggacaatttgtc
cttgataaaaccttccacctcgcttctgaagcagaaatgaaagatttcagcaatctgttc
ttcataaaaacatctgaaagtttcacggatcaacatatctggttttcgatatttgctcga
cccccaaggagctccttcaccagagtgcagcgggtctcttgctgcttctctctcctcttg
tgtacgatgttgaccaacatcatgttctggggaacagctgataatgggactgaacaggag
gagcaattggatgaccacattatcggtttgcgagaggtaatcattggaattgaaagtgcc
ttgatcatttttcctgtgaatctcataatcgtgcagatttttcgaaacacgcatcccaaa
tcaactgacatatcagcaacactaaataagtcagcttctgatgacccctcagaatgtcaa
cgaacccctgagaatataatgatgatggtggttgtcattgatttggaaggcattgtcgaa
gaggtcttggacatcaaaaggattgctagttctttgcctggaaagctaaaagatgcaatg
ccaacactagaagatgatatcagaaatgcaaatgacataaataagttactggtattaata
gcaaacattattcagcactgtaatgaacagtctgatactcaggaggctcctattccagat
aacgctacctgtagtcctgatcaacaaaatgaagataacaattccatggtcagcaatcct
gaagacaataattccacacgcagcgatcctgagaaagaaacagatcaaatgatgaaacac
ttcttacactatgtgagtcatctacttaactatgtggaaactgaactgcaagaaatggaa
ctaaagacatttcagaatccttacactcagatacatgctacagatcaagtgcagaagata
atacagttcatcaaagcagcaattaactctgcagatgctaaccacattactaagagaagt
aagaaaacaagccctgtttcgaaaggtctcccttggtggttcatttatattggctggctc
ctggtgtttgtcacaagtagtgtctcggcattctttaccatgctgtatagttttgattat
ggcaaagagaagtccatccaatggctcaaatccatgattgtcagcttcgtcgaaagtgtc
ttcatcatacagccattaaaggttttatttgttgctgccttcattgctcttattgtcaaa
aaggttgagagaaatgaaaatgaggaaagctacaatgaaaacttgctttctactatcaat
gaggatctcaatgtggtaactcccaactatactaaaaggtcagatgctggtatttacaag
ccaccgtcagtgaaacatgtggagaaaatgaaagcacagcacctcaaagaaaagaaaatg
tatgattttattaaagatatatttgctcacgtgggatttctggttgtgttggcaattatt
gcttatggagaacgaagccctcattcattttatttaaacaaagctctcaatgatagtttt
accaggaagttcaatggatccctggctgttaacgacttttatatctgggccaatgaaatt
ttattacccaacttatatggaccatacgaaggatttataactgatgggaattcaaagttg
cttggaagtcctcgcattcgacaggtcagaatcaaaccaactccttgccctgtgccaaca
agattagtagatagtattcaggagtgtcgtgctccttactcctatggtgatgaagatatg
ttggactttggaagtaaagggaatttcagtgtaaacacagaatcactctggttagcttct
gcctggcattaccagagtgagtcacagctgaaaggatatccagtttggggaaagatcgct
ctttaccgaggaggcggctttgtggctgagttgggaacagaaaacaaaactgcagacaga
attataaactacctgaaggaaaacacttgggttgacatgtataccagagccatctttgtg
gagttcacagtctataatgcaaatgtaaacctgttctgtgtagttacactgatgctggag
atgaacgcaattggtgtcttcctgggcaatatgcaaatggaaattatccgcctctatcac
tacgtggaccagaattactcttccatcattggggcccaagtggtcttcatcatcattgtt
atttattacatggttaagcagggaaaactcctaaagcaaaaaagaatgaaatatttctgt
gacaaatggaacttgattaatttagccattatcttgtgcagctgcagtgcacttggactg
tatataaaacgggctgtccttggaactcgagttatgaatgactacttgaaaaatcaggac
aggtttgtaaatttctacggaactgcaattacagactcgagtctgggttatgtgatcgct
tttttggtgtcactggcaactgttaaactgtggaatctgctgcgtttgaatcccaagatg
cacttgattacttcttcactacagagagcctggagtaatctcttgggacttctggtcatc
ttgatggtgttacttattgcctattcctctgtatgttacctggtgcttggtttatactta
tcctcctacaggactttcagcactgcagttataacaattatccatctgctgcttggagcc
ttcaactataatgaggtattgcagacttaccctttcttgggtgcaatcatcatcagtacc
tgtgtaatcatcatgacattcattctcataaacatttttatttctgccttactcatgtcc
ttcagtgaggaacgacatcacccaatgccttcggaagatgaagaaataattgacttgttg
ctggtgaaactgtgcaacatcattggaattcaaagaaaagggaaggaagaaccaccatca
aacgctgaagaaatggcatttgtccaggaaaaatag
DBGET
integrated database retrieval system
