Chiloscyllium punctatum (brownbanded bambooshark): 140453342
Help
Entry
140453342 CDS
T11285
Name
(RefSeq) histone-binding protein RBBP4 isoform X1
KO
K10752
histone-binding protein RBBP4
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03082
ATP-dependent chromatin remodeling
cpun03083
Polycomb repressive complex
cpun04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
140453342
03083 Polycomb repressive complex
140453342
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
140453342
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpun03036
]
140453342
Chromosome and associated proteins [BR:
cpun03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
140453342
Histone modification proteins
HAT complexes
HATB complex
140453342
HDAC complexes
Sin3A-HDAC complex
140453342
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
140453342
PRC2.2
140453342
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
140453342
Heterochromatin formation proteins
Other heterochromatin formation proteins
140453342
Chromatin remodeling factors
NuRD complex
140453342
NuRF complex
140453342
NuRF complex (fruit fly)
140453342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
WDR55
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_WDR75_1st
Beta-prop_EML
EIF3I
WD40_MABP1-WDR62_2nd
WD_LRWD1
Beta-prop_WDR90_POC16_2nd
Beta-prop_WDR19_1st
Beta-prop_DCAF12
WD40_RFWD3
ANAPC4_WD40
Beta-prop_RIG_1st
WD40_MABP1-WDR62_1st
eIF2A
MIOS_WD40
Beta-prop_SPT8
NBCH_WD40
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_DCAF4
Motif
Other DBs
NCBI-GeneID:
140453342
NCBI-ProteinID:
XP_072403989
LinkDB
All DBs
Position
27:486633..546617
Genome browser
AA seq
484 aa
AA seq
DB search
MTDKEASDAHYDVTPVTSHTHCSSLLTAASPVQSTHLDTTPAICHEWKRGKKTAFDDAVE
ERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPDVSRPEGKDYSVHRLVLGTHTS
DEQNHLVIASVQLPNDDAQFDASHYDSEKGEFGGFGSVSGKIEIEIKINHEGEVNRARYM
PQNPCIIATKTPSSDVLVFDYTKHPSKPDPSGECSPDLRLRGHQKEGYGLSWNPNLSGHL
LSASDDHTICLWDISAVPKEGKIVDAKTIFTGHTAVVEDVSWHLLHESLFGSVADDQKLM
IWDTRSNNTSKPSHSVDAHTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSF
ESHKDEIFQVQWSPHNETILASSGTDRRLNVWDLSKIGEEQSPEDAEDGPPELLFIHGGH
TAKISDFSWNPNEPWVICSVSEDNIMQVWQMAENIYNDEDPEGAPDPEGLPKMHQFQTGH
FQLT
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacaaagaagcatcagatgcccattatgatgttacacctgtgacgtcacacacc
cactgttcttcattactgacggccgcctcacctgtgcagtccactcatctcgacacgacg
ccagccatttgtcatgaatggaaacgaggaaaaaaaacagcctttgatgatgccgtggaa
gagcgtgttattaacgaagaatacaagatctggaagaaaaatactccctttttgtatgac
ctggttatgacgcatgctctggaatggccaagcctgactgcacagtggttgcctgatgtt
tctagacctgagggaaaggactacagtgttcacaggctggtgctgggaacccacacatct
gatgagcaaaaccatttggtcatcgccagtgttcaactgccaaatgatgatgcgcagttt
gatgcttcacattacgatagtgagaaaggagaatttggtggatttggttctgttagtgga
aagatagagattgaaataaaaataaaccacgaaggggaagtaaatcgtgctcgttacatg
cctcagaatccttgcattattgctactaagactccctccagtgatgtgttggtctttgat
tatacgaaacatccttccaaaccagatccctctggtgagtgcagtccagatcttcggtta
cgtgggcaccagaaagaaggctatgggctctcatggaatccgaatctaagtggccattta
cttagtgcttcagatgatcatactatctgcttatgggatattagtgctgtacctaaagaa
ggaaagatagttgatgcaaaaactatctttactggtcatacagcagtggtagaagatgtg
tcatggcacttgctgcatgagtcgctgtttggttcagtggcagatgatcagaaactaatg
atctgggatacaagatctaacaatacatctaagccaagtcactccgttgatgcacataca
gcagaagtgaactgtctctcattcaatccttacagtgaatttatcttagcaactggttct
gctgataagactgtagcattgtgggatttaagaaacctgaaactaaagttacattccttt
gagtcacacaaggatgaaattttccaggttcagtggtctcctcataatgaaacaatcctg
gcatcaagtggaacagatcgcagactaaatgtgtgggatttgagtaaaattggagaagaa
cagtcacctgaagatgccgaagatggtcctccggaactgttgtttattcatggtggtcac
acagctaagatctcagatttttcttggaatccaaatgaaccatgggtaatttgctctgta
tctgaagacaatatcatgcaagtttggcagatggctgaaaatatttacaacgatgaagat
cctgagggagcgcctgatccggaaggcctaccaaagatgcatcaatttcagactgggcat
tttcaattaacttga
DBGET
integrated database retrieval system
