Chiloscyllium punctatum (brownbanded bambooshark): 140453971
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Entry
140453971 CDS
T11285
Symbol
rnf115a
Name
(RefSeq) E3 ubiquitin-protein ligase RNF115 isoform X1
KO
K11982
E3 ubiquitin-protein ligase RNF115/126 [EC:
2.3.2.27
]
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
cpun04131
]
140453971 (rnf115a)
04121 Ubiquitin system [BR:
cpun04121
]
140453971 (rnf115a)
Enzymes [BR:
cpun01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140453971 (rnf115a)
Membrane trafficking [BR:
cpun04131
]
Endosome - Lysosome transport
Rab GTPases and associated proteins
Rab associated proteins
140453971 (rnf115a)
Ubiquitin system [BR:
cpun04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140453971 (rnf115a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
zf-RING_11
zf-C3HC4_2
zf-RING_UBOX
Zn_ribbon_19
zf-C3HC4
zf-rbx1
zf-RING_5
HypA
IBR_1
Motif
Other DBs
NCBI-GeneID:
140453971
NCBI-ProteinID:
XP_072404959
LinkDB
All DBs
Position
28:8901363..8923759
Genome browser
AA seq
273 aa
AA seq
DB search
MAEAAAAVSPLRFFCHCCKGEVCPKLPEYTCPRCESGFIEEVTDETSFLDNGTNGLDDDS
ATQFAELWDRTFLNLDQTFLFVDGRPLRSGTSLDHDGGDLERGSQQNDIWGPSRHTRLPM
ARRYRARGASRPERSPAIEGIIQQLFAGLFNAGISGSQQTFSWSGMLHSNPADYAWGQSG
LDAVITQLLGQLENTGPPPADKDKITALPTVHITQEQIDSGLECPVCKEDYLLEEQVRQL
PCNHFFHSDCIVPWLELTRLCFSMIPVPCVARV
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcggcggcggctgtctctccgcttcgtttcttctgtcactgctgcaaggga
gaggtgtgccccaagctgccggagtacacctgtcctcgatgtgagtccggctttatagag
gaagtcacagacgaaacaagtttcttggacaatggaacaaatggtcttgatgatgattca
gccacacagtttgccgagctatgggatcgcaccttcctgaatctggaccagaccttcctg
tttgttgatgggagacccttgcgcagtggaacgtctctagatcacgatggtggggacctg
gaacgaggaagccagcagaatgatatctggggtcccagccgacacacgaggttaccaatg
gccagaaggtatcgtgcccgcggagcatcacgcccagagaggtctccagccattgaagga
ataatccagcagctgtttgctgggctcttcaatgcaggaatctcaggctctcagcagaca
ttctcctggagcgggatgctacactcaaaccctgctgattatgcctgggggcagagtgga
cttgatgcagtgattacacagcttctgggacaactagaaaacacggggccgcctccagca
gacaaagacaaaatcacagctctcccaacagtgcatatcacgcaggagcagattgattcc
ggtttagaatgtccagtttgtaaagaggattatcttcttgaggaacaggttcgacaactt
ccctgtaaccacttcttccacagcgactgcatcgtaccctggttagaactgacacgactg
tgtttcagcatgatacctgtcccgtgtgtcgcaagagtttga
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