Chiloscyllium punctatum (brownbanded bambooshark): 140454021
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Entry
140454021 CDS
T11285
Symbol
gabpb2b
Name
(RefSeq) GA-binding protein subunit beta-2b isoform X1
KO
K09454
GA-binding protein transcription factor, beta
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpun03000
]
140454021 (gabpb2b)
03029 Mitochondrial biogenesis [BR:
cpun03029
]
140454021 (gabpb2b)
Transcription factors [BR:
cpun03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
RHR (Rel homology region) Ankyrin only
140454021 (gabpb2b)
Mitochondrial biogenesis [BR:
cpun03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Ubiquitas transcription factors
140454021 (gabpb2b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_3
Ank_4
Ank_5
Ank_KRIT1
PglZ_C
ANK_LRRK2
ERM_helical
GrpE
Motif
Other DBs
NCBI-GeneID:
140454021
NCBI-ProteinID:
XP_072405055
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Position
28:14049488..14107021
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AA seq
447 aa
AA seq
DB search
MLNRAVTMSLVDLGKRLLEAARKGQDDEVRTLMANGAPFTTDWLGTSPLHLAAQYGHYST
AEVLLRAGVSRDARTKVDRTPLHMAAAEGHASIVELLIRNNADINAKDMLKMTALHWAVE
HDHREVVEILLKYGADVHALSKFDKNAFDIALDKHNPELVGILQEAMQNQVNTNPERTNS
VAVATPQFIIAPAGVMNLSGLVSSTSTKTTSGESGVSTVQYGNSTTSVLATLAALAEASG
PLSNSPRSTAATEEVVTADSVDSAIQQVVGSGGQRVITIVTDGGVQLGNLPAGINTGQPF
IVTMQDGQQVLTLPTTHVEEETVITEEMPAKKECLEEVLNHSESIEKDTNDCLERELLQK
QLHEANRKAQEYRQQLMKKEQEAEEYRMRLEAIARLHTTAEEITVVEEVTDDGTGTVITM
AAELEGPETTVETMEQPTDMATETVTS
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
atgctgaatcgggcagtaacaatgtccctggtggatttggggaagaggttgttggaggct
gctcgaaaaggacaggacgatgaggtgcgaacactaatggcaaatggtgctcccttcact
acagattggctgggcacatctcctcttcatcttgcagcccagtacggtcattattcaaca
gcagaagtcctcctccgggccggagttagtcgggacgcccgaaccaaagttgacaggaca
ccactacacatggcagcagctgagggccatgcaagcattgtggagctcttgatcaggaac
aatgcagatataaatgctaaggacatgctgaagatgactgctttgcactgggcagtggaa
catgaccatcgcgaggtggtggagattttgttaaaatatggagcagatgttcatgctttg
agcaagtttgacaaaaatgcctttgatatcgcccttgacaagcacaatcctgaattggtg
ggaatattgcaggaagccatgcagaatcaagtgaacacaaatccagagaggacaaattca
gtcgctgtcgccacaccacagttcatcattgcgcctgcaggagtgatgaacctctcagga
ctggtttcttcaacatctaccaaaacaacctcaggtgaatctggtgtatccacagtacag
tatggtaactccacaacctcagtactggctacgctggctgctttagctgaagcttcaggg
ccactctcaaattcaccccgaagtacagctgcaacggaggaagtggtgactgcagactcg
gtcgactcggcgattcagcaggtcgtaggcagtggaggtcagagggttatcaccatagtg
acggacggtggggtgcagctgggtaaccttccagcgggcattaacactggccagccattc
attgtgaccatgcaggatggacagcaagttttgaccctcccaaccacccatgttgaggaa
gagacagtcatcactgaagaaatgccagcaaagaaagagtgtctggaagaagtccttaat
cattccgaatcaatagagaaggacacaaatgactgcttggagagggaactacttcaaaag
cagctccacgaagcaaaccggaaagctcaggagtaccggcagcagctgatgaagaaggaa
caggaagcagaggagtaccgcatgagactggaggctattgcaaggctccacaccacagcc
gaggagatcactgttgtagaggaggtcacagatgatggcactggcacggtgatcaccatg
gcagcagagctggaaggtcctgagaccacggtggaaacaatggaacagcctactgacatg
gcgacagaaacagtgacttcgtaa
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