Chiloscyllium punctatum (brownbanded bambooshark): 140454314
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Entry
140454314 CDS
T11285
Symbol
trim54
Name
(RefSeq) tripartite motif-containing protein 54
KO
K10653
tripartite motif-containing protein 54
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
140454314 (trim54)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpun04121
]
140454314 (trim54)
Ubiquitin system [BR:
cpun04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
140454314 (trim54)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
zf-RING_UBOX
zf-C3HC4_2
RING_XB3-XBAT31
zf-C3HC4
zf-B_box
zf-RING_5
zf-RING_2
zf-C3HC4_4
zf-C3HC4_3
zf-RING_6
TRIM_CC
Sina_RING
Prok-RING_4
DUF6793
Zn_ribbon_FGT1_2
zf_Tbcl
CoiA_N
DUF6244
CDC37_M
Motif
Other DBs
NCBI-GeneID:
140454314
NCBI-ProteinID:
XP_072405150
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All DBs
Position
3:102120107..102205482
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AA seq
343 aa
AA seq
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MNLAVGFKPMLGGAQTMDSLEKQLICPICLEMFTKPVVILPCQHNLCRKCANDVFQASNP
FWQSRGSTTVPSGGRFRCPSCRHEVVLDRHGVYGLQRNLLVENIIDIYKQESSRPLHTKS
DQQLMCEEHEEEKINIYCLTCEAPTCSMCKVFGAHKDCEVAPLQNVYKRQKDNSRRQKQL
LCEKFDSLYTILEERKKEMLQCITREQEEKVQYVRSLMRQHGDHLEGASKLVETALQFTE
EPQMAVFLQNTKQLIKKVIDTSKAAQLERTEPGYENMDHFVVNLGRAEQVLQKINFQTDY
QGEEEEEVEEEEIEEGGGAEEDGETTDGELPTPLHSAGTGLTF
NT seq
1032 nt
NT seq
+upstream
nt +downstream
nt
atgaaccttgcagtaggattcaaaccaatgcttggaggcgcgcagacaatggacagtttg
gagaaacaacttatttgtcctatttgtctggaaatgttcacaaaaccggttgtgatttta
ccatgtcaacataacttgtgtagaaaatgtgccaatgatgttttccaggcttctaaccca
ttctggcagtcaagaggctccacgacagtgccttcagggggtcgctttcgctgtccttcc
tgccgacatgaagtagtactggatcgccatggagtttatggcctgcagagaaatctcctg
gtagaaaatatcattgacatctacaagcaagaatcatccaggcctctgcataccaaatct
gaccagcagttaatgtgtgaagagcatgaagaggaaaagattaatatttactgcctgact
tgtgaggctccaacttgctcaatgtgcaaagtatttggtgctcacaaagattgtgaagtg
gcacctcttcaaaatgtctacaaacgtcaaaaggataacagcagaagacaaaaacaactc
ctttgtgaaaaatttgattctctgtacaccattctagaagagaggaaaaaagaaatgctt
caatgcattacgcgtgaacaggaggagaaagtgcagtatgtgcgatctctgatgagacag
catggggatcacttggagggagccagcaaacttgtggaaacagctctgcagtttacagag
gaacctcagatggcagtgttcctgcagaatacaaagcagctaattaaaaaagttattgat
acttcaaaagcagctcagttggagagaacggaacctggatacgaaaacatggatcatttt
gtggtcaatcttggaagagctgaacaggtgctacaaaagataaatttccagacagattac
cagggagaagaagaggaagaagtagaggaagaagagatagaggaaggtggaggagcagaa
gaagatggagagacaactgatggtgaattacccactccattgcattctgctggaacaggc
ctaacattttga
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