Chiloscyllium punctatum (brownbanded bambooshark): 140454544
Help
Entry
140454544 CDS
T11285
Symbol
npas1
Name
(RefSeq) neuronal PAS domain-containing protein 1 isoform X1
KO
K09098
neuronal PAS domain-containing protein 1/3
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpun03000
]
140454544 (npas1)
Transcription factors [BR:
cpun03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
140454544 (npas1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAS_3
bHLH_HIF1A
PAS_11
PAS
PAS_9
PAS_4
HLH
Motif
Other DBs
NCBI-GeneID:
140454544
NCBI-ProteinID:
XP_072405463
LinkDB
All DBs
Position
29:complement(70791851..71234547)
Genome browser
AA seq
922 aa
AA seq
DB search
MLESLPHGAAERCVPARAAGAMERAASAAAASAAGAGNQNWRPGQQGLQALRKEKSRNAA
RFRRGKENFEFYELAKMLPLPGAITSQLDKASIIRLTISYLRMRDFANLGDPPWNLRIEG
PPPNISVKAIGSQQRRSSTSLAIELFEQHLGGHILQSLDGFIFALNREGKFLYISETVSI
YLGLSQVELTGSSIFDYIHPGDHVEVAEQLGLKLPSGRGHSSQTSNEDGASSTSSSSLAE
TPESGKADSGSPSLLGDDNVLERTFFVRMKSTLTKRGVHVKSSGYKVIHVTGRLRSRISL
PHTRAVPTSFMGMVALAHTLPPSTINEVRIECHMFVSRVSLDLQIIYCENRISDYMDLST
TDVVGKNCYHFIHAEDVEGIRHSHLDLLNKGQVVTKYYRWMQKNGGYMWVQSSATISINV
KNGNEKNIIWVNHVLSKPEHRNTPMDISQLPLSAIKSSKQLELSDSESDSQEHLERDNPK
DTGKRSNYEKLAAPHSEGWKRSASQSEEELTSAKDDSDSSLPDDSDSEGPSTGRRSFVLS
KVKRMKVEGDGEVRPVAREPRSSLPSGGDGDTDSSEDESSGLASKPQYLKRKRRPRESSA
ARAKSSDSPSPGASNFGGGGGGGRAPSKPAPDRISPLKIKTEAVQPVNFDNNSAIWNFPP
NREVMRSELPYRLATSEHFHPVPALHVAIPDSVLTPPGGADASGGQKTPFSSPATPPPAA
RSVLAAGAGTGGSSDALSPPLSGSPREDKAQAAAYARELEMVHQRRLHAVLPLVTPHPVS
GASPSPSPSSSVVVGGSSSGPPTQGLYTTSTIRYAPADVALAMQGNLLPAAAAINFVDLN
ASAFGSGGGSAADSKAQVEMIYHHVQRLNMAGPFTSPVGAAGLTQVPAGSVFTTAEALLS
TLPFPMNMGSIHAPQTLERKED
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgctggagagtctcccccacggggctgcggagcgctgtgtgccggccagagcagcggga
gcaatggagagagcggccagcgctgctgccgcttctgctgccggcgccgggaatcagaac
tggagaccggggcagcaaggtttgcaagccctccggaaggagaagtctcgcaatgctgct
cgctttcgacgggggaaagaaaactttgagttctacgaattggcgaagatgcttccactc
ccgggagctatcaccagccagctggacaaggcctccatcatccggttgaccatcagctac
ctccggatgagggactttgccaatctgggggatcccccatggaacctgaggattgagggg
cccccacctaacatctctgtaaaagcaataggatcccaacagaggagaagttccacttcc
ttggccattgagttatttgaacagcacttaggaggacacatcctacagtccttggatggt
tttatttttgcactaaatcgagaagggaaatttttgtacatctctgaaactgtctccatc
tacctgggactgtcgcaggtggaactgacgggtagcagcatctttgattacattcaccct
ggggatcatgtggaggtggcagagcagctgggactgaaactaccaagcggacgagggcac
agctcgcaaacttccaatgaggatggggcaagctcaacatcttcctcctcactggctgag
acacctgagtcaggtaaggcagactctgggagtcccagtctcctgggtgatgataatgtg
ttggagcgcacgttcttcgttcgcatgaagtcaacactgaccaagcgaggggttcatgtc
aaatcttcaggatacaaggttatccatgtcacagggcggttgcgatctcggatttcgttg
cctcacactcgtgctgttcccaccagtttcatgggaatggtggctctcgcccacacactc
cccccttccaccatcaatgaggtccgaattgagtgccacatgtttgtctccagggtcagt
ctggatctgcagatcatctactgtgaaaacaggatctccgattacatggacctatccacc
actgatgttgtagggaaaaactgttatcacttcattcacgctgaggatgttgaaggaatc
aggcatagccacctggacttgttaaacaaggggcaggtggtcaccaagtattatcgctgg
atgcaaaagaacggaggttacatgtgggtgcaatccagtgcaaccatctcgatcaatgtc
aagaatggaaacgagaagaacatcatctgggtcaaccatgtgctgagcaaaccagagcac
cgaaatactccaatggacatctcccagcttccattgtcagccattaaatcttccaagcaa
ctggagttgtcggattcggaatctgattcccaagaacacttagaaagggacaatccaaaa
gacactgggaagcgaagcaattatgagaagttggcagcacctcactcagaaggctggaaa
cgatcagcgagccaatcagaggaagagttgacttcagccaaggacgacagtgactccagc
ctgcctgacgactcggacagtgaggggccgagcaccgggcggaggagctttgtcctgtcc
aaggtcaagcgcatgaaggtcgagggggatggcgaggtgcggccagtggcacgcgagccc
cggagctccctccccagtggcggtgatggggacactgatagctcggaggatgagagcagc
ggcctggccagcaagccccagtacctaaagaggaagaggaggcctcgcgagagctcggcc
gcgagggccaagtcatcagactcaccgagccctggtgcctccaattttggcggtggaggt
ggcggaggtcgggccccgtccaaacccgcacctgatcgcatctctcccctcaagatcaaa
actgaagccgttcagcccgtcaacttcgacaacaacagcgccatctggaactttccgccc
aaccgtgaagtcatgaggagcgagctgccttaccgcttggcgacctctgagcactttcac
ccagtgccagctcttcacgtcgctatcccagattccgtgctgacacccccagggggcgcc
gatgccagtggtgggcagaagactccatttagcagccccgccacgccgccccctgcagcc
cggtctgtcctggcagcaggagcagggacaggggggtcatcggacgccctgtcgcctcct
ctgtcaggctctccccgcgaggacaaggcccaggcagcagcctatgcacgtgagcttgag
atggtgcaccagcggcggctgcacgcagtgctgccgttggtgacccctcaccctgtgagt
ggagccagcccttccccttccccttcctcctccgtcgtcgtcggtggtagcagcagcggc
cccccgactcagggcctctacaccaccagcaccatccgctatgcgccggctgacgtcgcc
ttggccatgcagggcaacctgctgccggctgccgctgccatcaactttgtggacctcaat
gcctctgcctttggcagcggtggtggcagtgccgccgactcgaaagcccaagtggagatg
atctaccatcacgtccagcggctcaacatggcggggcccttcaccagccccgtcggcgca
gctggcttgacccaggtgccagcgggaagcgtcttcacgacggccgaggccctgctctcc
acgcttcccttccccatgaacatgggcagtatccatgccccccagactctggaacgcaag
gaagattga
DBGET
integrated database retrieval system
