Chiloscyllium punctatum (brownbanded bambooshark): 140454689
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Entry
140454689 CDS
T11285
Name
(RefSeq) hypoxia-inducible factor 1-alpha-like
KO
K09096
hypoxia-inducible factor 3 alpha
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpun03000
]
140454689
Transcription factors [BR:
cpun03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
140454689
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GFIT
Motif
Pfam:
HIF-1a_CTAD
HIF-1
PAS_11
PAS_3
Motif
Other DBs
NCBI-GeneID:
140454689
NCBI-ProteinID:
XP_072405717
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Position
29:77894374..77921499
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AA seq
581 aa
AA seq
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MNNPGEGTECIVAQFANGTKIREGTVLSKGQVISPQYRFLARTGGYVWLRTQASTISSSK
SNQPQSIICINSVLSNVMEDSVTFSLDQTRLLTPDTDPENGQRLLSQWEENPKKSDELGP
APGDSVVSLDLAGQRDVKAFHFTRRLPDDDQAPLSPEEFCSPALCKLLSPIFNGLEMSSN
MDSKPLSKQPERTREDPDTPGVTVPKPGSSETADVNIEESEKNLIAADTKALQTKATQEV
MELDLEMLAPYISMEEDFQLNSLECAEEKDGQVCPDVHPEPRGRSATATDSRSFSGSPTE
PRNTGPASGRPRSCSFHGVRPSVQDHPRREGDPEGNSAALQRSCSVTNLSKAPGPGLLAP
APAPGPAPAQAPAPGPAPASGYYTLAFGGPAFTVAVKNVLLALFQPQAPEAKVQTPSSKG
QEATSAGAARGLEPSDLLDTAGLSRESAQHELSKQRSQRDSEFRRNHGQLSPQILDLHNL
KRKHSLLIGNLQDSNLDVSSVADIVQVTAKRLKRPETQQVEAQTETLPSGTPMTLTMQLL
GKEVPGPPELTRYDCEVNAPLPDRHRLLQGPELLRALDQSS
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atgaacaatccgggtgaaggaactgagtgcattgttgctcagtttgcaaatggcacaaag
atcagggaagggacagtgctgagtaaggggcaggtgatttctccccagtaccgtttcctg
gcgcggactgggggttatgtttggttgcggactcaggctagtaccatctccagcagcaag
agtaaccagcctcagtcgatcatctgcatcaactccgtgctcagcaatgtgatggaggac
tcagtcaccttctccttggatcagaccaggctcctgactcccgacaccgatcccgagaac
ggccagcgcctcctgagccagtgggaggagaatcccaagaaatcggatgagctgggccct
gctcctggagacagcgtcgtttccctggatttggcaggtcaaagggatgtgaaagcattt
cacttcaccagaaggctcccggatgatgaccaggcccccctgtccccagaggaattctgc
agccctgctctctgtaaacttctgtctccaatctttaatggcctggagatgagctccaac
atggactccaaaccactcagcaagcagccggagagaacgagagaggacccagacacacca
ggggttacagtgcccaaaccaggcagctctgagacagccgacgtgaacattgaggagtct
gagaaaaatctgatcgcagccgataccaaagctctgcaaaccaaagcaacccaggaggta
atggagctggatttggagatgttagcgccctacatctccatggaggaggacttccagctg
aacagcctcgagtgtgctgaagagaaggacggacaggtctgtcctgatgttcacccggag
ccccgcggaaggagcgccacagcaacggactctagaagtttctctgggagcccgaccgag
ccaaggaacaccggccctgccagcggccgccccaggtcctgcagcttccacggggtgcgg
cccagtgtgcaggaccatcctcggagagagggcgacccagagggaaactctgctgctcta
caacgttcctgcagtgtgaccaatctcagcaaagccccaggcccagggctcctggcccca
gccccagccccaggcccggccccagcccaggccccagccccaggcccagccccggcctct
ggttactacacgctcgctttcggaggaccagcattcactgtggctgtgaagaacgtcctc
ctggctttattccagccccaggcccctgaggccaaagttcaaactcccagcagcaaaggt
caagaagcaacatccgcaggcgctgcccgggggctggagccaagtgatctcctggacacg
gctggactcagcagagaatcagcccagcatgagctgtccaaacagaggtcgcagcgtgac
tcagagttcaggagaaatcacgggcagctcagtccccagatactagaccttcataacctc
aaaaggaaacactctctgctgatcgggaacttgcaggattccaatttggatgtttcgagt
gtggctgacattgtccaagttacagcaaagcgtttgaaaaggccggagactcaacaagtt
gaagcgcagacagagactctgccgtctgggacaccaatgacgctgaccatgcagttactt
gggaaggaggtgcctggtcccccagagctgacccgttatgactgtgaagtgaatgctccg
ttaccggacagacaccgtctcttgcagggccctgagttactgagagccctggatcaatcc
tcctga
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