Chiloscyllium punctatum (brownbanded bambooshark): 140455638
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Entry
140455638 CDS
T11285
Symbol
nvl
Name
(RefSeq) nuclear valosin-containing protein-like isoform X1
KO
K14571
ribosome biogenesis ATPase
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
140455638 (nvl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpun03009
]
140455638 (nvl)
Ribosome biogenesis [BR:
cpun03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
140455638 (nvl)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
RuvB_N
AAA_5
AAA_16
AAA_2
AAA_22
AAA_14
TIP49
AAA_28
Nucleolin_bd
AAA_33
Mg_chelatase
nSTAND3
AAA_17
NPHP3_N
RNA_helicase
ABC_tran
Viral_helicase1
ATPase
Rad17
AAA_18
Zeta_toxin
IstB_IS21
Vps4_C
TsaE
NB-ARC
Sigma54_activ_2
TSCPD
Motif
Other DBs
NCBI-GeneID:
140455638
NCBI-ProteinID:
XP_072406708
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All DBs
Position
3:11903222..11965215
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AA seq
861 aa
AA seq
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MLALSVAAAALTSSEDPKKDPFHVKKLQKRKVNITVCRECGHYVEEVLVTGQDIPRWWAP
GFAALRSSWWNFNSDYGRRKRNAFRIQVDKVFQSIRNEMAYLEEEHQVKRARQSWTQDGR
GLTSDSSDSEDYPEYPLTNHMNTSLLSLYRKTNPDPPATPAARKVSEDDSNHGHEAPQTL
GQSQGSLQGTELSEDSWFIDQIPGVSCSEAHLLDEKESKQNPERLEASPVDQATRKQRRL
RKRKRQDREESKDVDAQIESSVLNRKAKKGFELHHSMVTFEDVGGCEGTLKAVCQLLIHM
RHPEVYQQLGVVPPRGFLLHGPPGCGKTLLAQATAGELELPMLKVAATEIVSGVSGDSEQ
KLRELFEEAVLQAPCIVFIDEIDAISPKREVASKDMERRIVAQLLTCMDDLNNLASTTQV
LVIGATNRPDSLDPALRRAGRFDREICLGIPSEGAREQILRTLCRKLKLPELFDFHQLAR
LTPGYVGADLMALCREAAMHTVNRVLIQQHEDSRQADTSQQQTELAEFERLCTLLKDPLP
LSEKELQKLHIEMTDFTDSLSVVQPSAKREGFATVPDVTWADIGALQEIREELSMAILAP
IRHPEHFQLLGLSSPAGVLLAGPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESE
RAVRQVFQRARNSAPCVIFFDELDSLCPRRSEHESGASVRVVNQLLTEMDGLETRKQVFI
MAATNRPDIIDPAVLRPGRLDKTLYVGLPKASDRFAILQTLTKFGTHPLLNSDVDLSVIA
SDQRCDSFSGADLSALVREASINALRQHLSGQSSEQASAPSSGIRVARHHFEAAFEKVKP
SVSKKDQLMYEMLRQSLSQSL
NT seq
2586 nt
NT seq
+upstream
nt +downstream
nt
atgctggcattgtccgtagcagctgccgcgctcacttcaagtgaggaccccaagaaggac
ccatttcacgtgaagaagcttcaaaaaagaaaagtgaacatcacagtctgcagggaatgt
gggcattatgttgaagaggtgctggtcactgggcaagacatcccaagatggtgggcacct
ggatttgcagcacttcgtagtagctggtggaatttcaactctgattatggccgcaggaag
aggaatgccttcaggatccaggtggataaagtgtttcaatccatcagaaatgaaatggca
tatttggaggaggagcatcaggtcaaacgggctcgacagagctggacacaggatgggagg
ggcctgacctctgattcgtctgacagtgaggattaccccgaatacccgctgaccaatcac
atgaacacttcgctgctgagcctgtatcggaaaaccaacccggaccctcctgccactcca
gctgccaggaaggtgtcagaggatgacagcaatcatgggcatgaagctcctcaaacactg
ggtcagtcacaaggatccctgcaaggtacagagctttctgaggacagttggttcattgac
cagataccaggagtttcctgttcagaagctcatctgcttgatgagaaagaatcaaaacag
aatcctgagagattggaagcatcgccagtggatcaagccacgaggaagcaaaggagactg
cgtaaaaggaaacggcaagatagagaggagtcaaaggacgtggatgctcagatagagtca
tctgtattgaataggaaagcaaagaaaggatttgaactgcatcattcgatggtgacgttt
gaggatgtcggtggctgtgaaggaaccttaaaggctgtgtgccagctactgattcacatg
agacatcctgaggtataccagcagttgggtgtggtaccaccccgaggattcctgttacat
ggacccccaggctgtgggaagacgctgttggcacaagctactgctggggagctggagctg
ccgatgttgaaagttgctgcgactgagattgtatctggggtatctggagactctgagcag
aaactacgggagctttttgaagaagctgtgctgcaggctccctgcatcgttttcattgat
gagattgatgccatttctcccaaacgggaagtggcttcgaaagatatggaacgtcggatt
gtggctcagctgctgacctgcatggacgatctgaataatctggccagcaccacacaagtc
ctggttatcggtgcgaccaaccggccagactcattggaccctgcactgcgaagagctgga
cgctttgaccgggagatttgtctgggaattccaagtgagggtgcccgtgaacagattttg
aggactttgtgtcgaaaactgaaacttccggaattgtttgattttcaccaacttgcccgc
ctgacccctggctatgtgggtgctgacttgatggctctgtgtcgggaagcagccatgcac
acggttaaccgtgttctgatccagcaacacgaagacagcagacaagcagatacttcacag
caacaaacagaactggctgagtttgagaggctgtgtacattgctgaaagatccattgcct
ctctctgagaaggagctgcagaaactccacatagagatgaccgatttcactgattcacta
tcggtggtccagccctcagccaagcgggaaggatttgccactgtgcctgatgtgacttgg
gctgatataggagctctacaagaaatccgtgaggagctctccatggctattctggctccg
atccgacacccagagcatttccagcttctgggactgtccagcccagctggtgtgctattg
gctggacctccaggctgtgggaagacactgttggccaaggctgttgcgaatgagtctgga
ctgaatttcatctctgtgaaaggacctgagctgttaaacatgtacgttggtgagagtgaa
cgggcagtacggcaagtgttccagcgagctaggaattcagcaccttgtgtcatttttttt
gatgaattggactcactttgccctcggagatcagaacatgagtcaggtgccagtgtgcgt
gtggtgaaccagttgctgacagagatggatggcctggagactcggaagcaggtttttatc
atggcagccacaaacagaccagatattattgatcctgctgtgctgcgacctggccgactg
gataagacgttatatgtcggattaccgaaggcctcagaccgatttgctatcttgcaaact
ttgacaaagtttgggacccatcccctattgaactctgatgttgatctgtctgtgattgcc
agtgaccagcgctgtgacagcttctcgggtgcagacctgtccgcactggtacgtgaagct
tccattaatgccctgaggcagcatctgtctggtcaatcctccgaacaagcctcagctccc
agctcaggaatacgggtggcacgacatcacttcgaagcagcctttgagaaagtgaagcct
tccgtgagtaaaaaggaccagttgatgtatgaaatgctgcgacagtctctcagccagtct
ttgtga
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