Chiloscyllium punctatum (brownbanded bambooshark): 140458128
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Entry
140458128 CDS
T11285
Symbol
mkrn1
Name
(RefSeq) probable E3 ubiquitin-protein ligase makorin-1 isoform X1
KO
K15687
E3 ubiquitin-protein ligase makorin [EC:
2.3.2.27
]
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpun04121
]
140458128 (mkrn1)
Enzymes [BR:
cpun01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140458128 (mkrn1)
Ubiquitin system [BR:
cpun04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
140458128 (mkrn1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MKRN1_C
zf-CCCH_4
Torus
zf-CCCH
zf_CCCH_4
zf-CCCH_DUS3L
zf-CCCH_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
zf-CCCH_3
zf-RING_5
zf-CCCH_PARP12
zf-rbx1
zf-C3HC4_4
Misat_Tub_SegII
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
140458128
NCBI-ProteinID:
XP_072408337
LinkDB
All DBs
Position
32:complement(44642223..44702379)
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AA seq
463 aa
AA seq
DB search
MAEAAASMGTAAATAAQAVTVTLAGGGGGGVGWTKQVTCRYFMHGVCKEGNNCRYSHDLT
TSKPSLICKYFQKGCCTYGDRCRYDHVKPSNQGLSEVQSGPTPLISKDSATASASKLTPL
TKLNGEMSTKTVIEESNPATSSNLEDWVNAAEFIPGQPYCGRTTSAYPETRNEDLIIEEN
FEGSQTEDVKKQMCPYAALGECRYGVNCVYLHGDVCDMCGLQVLHPVDASQRSDHIKACI
EAHEKDMELSFAIQRSKDIICGICMEVIYEKTNASERRFGILSNCSHTYCLNCIRKWRSA
KQFENKIVKSCPECRITSNFVIPSEYWVEDKEEKQKLIKKYKEAMSNKACRYFDQGRGTC
PFGSNCFYKHAYPDGRLEEPQPPRKPVASMGRYRNQRRTHFWNFIEERENTDSYENDEMV
TFELGEVLLMLLADGHDDDFSDTDDEWDLFHDEMDVDYYEFDL
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atggcggaggcagcggcatccatggggacggcggcggcgacagcagcacaagcagtaaca
gtaactcttgctgggggaggaggtggcggagttggctggacaaagcaggtcacttgcagg
tacttcatgcatggtgtttgcaaagaaggaaacaactgccgctattcccatgaccttaca
accagcaagccttcactgatttgcaaatacttccagaaaggatgctgtacctatggagat
cgctgccggtatgaccacgtgaagccgtcaaaccaaggattgtcagaggttcagagtggt
cctacgccattgatctcgaaggattctgccaccgcatcagcttctaaacttactccactt
accaaattaaatggtgaaatgagcacaaaaacagtgattgaggaatccaaccctgcaaca
agttcaaacctggaggactgggttaatgcagcagaatttatacctggacagccatactgt
ggacgaacaacatcagcttaccctgaaacaagaaatgaagatctaataatagaagaaaac
tttgagggctcacaaactgaagatgtgaagaagcagatgtgtccatatgctgccttagga
gaatgtcgatatggtgttaactgtgtgtacctccatggagatgtgtgcgatatgtgtggt
ttacaggttctccatccagttgacgcctctcagagatcagaccacataaaggcatgcatt
gaggctcatgaaaaagacatggagctatcttttgccattcagcgtagtaaggatattata
tgtggcatctgtatggaagtaatctatgaaaaaacaaatgcgagtgagcgacgttttgga
atcctgtccaattgcagtcatacttactgcctcaattgcattcgaaagtggaggagtgcc
aaacagtttgagaataagattgttaaatcctgtcctgagtgtcgaattacatcaaatttt
gtcattccaagtgaatactgggtagaagacaaggaagaaaaacaaaaacttatcaagaaa
tacaaagaggcaatgagcaacaaggcatgtcgatactttgatcaggggcgtggcacttgt
cccttcgggagtaactgtttctacaaacacgcgtaccctgatggtcgtctggaagaacca
caaccaccaaggaaaccagttgcatcaatggggagatatcggaaccaacggaggacgcat
ttttggaatttcattgaagagagagaaaatactgattcctatgaaaatgatgaaatggtc
acctttgaacttggcgaagtgttacttatgcttttggcagatggccacgacgatgacttt
tcagatactgatgatgagtgggacttgtttcatgatgaaatggatgttgattattatgag
tttgacctatag
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