Chiloscyllium punctatum (brownbanded bambooshark): 140458249
Help
Entry
140458249 CDS
T11285
Symbol
pus7l
Name
(RefSeq) pseudouridylate synthase PUS7L isoform X1
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
cpun03016
]
140458249 (pus7l)
Enzymes [BR:
cpun01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
140458249 (pus7l)
Transfer RNA biogenesis [BR:
cpun03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
140458249 (pus7l)
Prokaryotic type
140458249 (pus7l)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
R3H_PUS7L
PUS7L_N
R3H
Motif
Other DBs
NCBI-GeneID:
140458249
NCBI-ProteinID:
XP_072408711
LinkDB
All DBs
Position
32:complement(68507567..68551711)
Genome browser
AA seq
704 aa
AA seq
DB search
MDVLPLCWVSSHTGFSGTIKNSASDFVVTEINTHGQLVSDIGADSAQDSDDIESEQEKPH
PTQKKRLKKPEKAPETFSGLPIFDKSKNANVALGKINQTADSNLPESAANSPSVQTQGDV
LDLLLGSSLSENLEKFAFSVKESKDAEQEGTEDTARLLLGTFEDKSQRAAIHLAVRQKFP
FLKTITSCGEIEVRLDPQYSELCQLVSEEEANGFFGFLDAKDRRSKFSFQPSRNKEHRKA
IHHFVSKYFGKLVETKSFLEQDGCSARAAVITVRFRDKITSGRKRTANDCQTIYTAFTLC
KVNMETLEAIACLASELDVVASDFSYAGIKDKKAITSQSMVVKNVTINKLKAKQLSIQSK
GLKVYNLRRATKHLRVGQLKGNHFSIIIRNISKHQEDDPDSSLTSRVLEAIENVKEKGFV
NYYGPQRFGLGQNVQADQIGLALLKGKLVEAVHLVFTAEEGDDPVNQAKRHFIQTEDAKG
TLALMPEYKTRERMMLRALNRYGNNQEGCARAWFSLPHSMRVLYVHSYCSKVWNRAASFR
LRTYDLKVVEGDLVACDNLEWDPLNQENAQVHVVTAEDLKSNIYSINQVVLPMPGNSVQY
PCNKLALWYQETLARDGLQGCKFRIPALQLNIPGCYRRLLAQPQQLVFRWLEDKEMSFAQ
EGCVFATDESNQPQEMRDSLSVSFSLNSSCYATICLREIMKFNV
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atggatgtgttgcccctgtgctgggtcagtagtcacactggcttcagtggcacaattaag
aattctgccagcgactttgtggtgactgagatcaatacgcatgggcagctagtcagtgac
attggagctgatagcgcccaggattctgatgacattgaaagcgaacaagaaaagccccat
ccgacacagaagaagagactgaagaaaccggaaaaagcgccggaaacattttccggtttg
ccaatctttgacaagtcgaagaatgccaatgtcgcactgggcaagattaaccagactgct
gacagcaatttacctgaatctgcagctaactctccttcagtgcaaacccagggagatgtg
ttggatttgcttttgggtagctcactgtcagaaaatctggaaaaatttgccttctcggtt
aaagaaagtaaggacgctgaacaggaggggacagaagacacagctaggcttttacttgga
acctttgaagacaagtctcaacgagcagccattcatttagctgtacggcagaaatttcct
tttctaaagactattaccagctgcggtgagattgaggtcaggcttgaccctcagtattca
gaactctgccaactagtatctgaggaagaagccaatgggttctttggtttcttagatgca
aaagatagacgttccaagttctcatttcagcccagtaggaataaggagcaccggaaggcc
atccaccattttgttagcaagtactttggaaaactggtggaaacaaagagttttttagag
caagatggctgcagtgcgagggctgcagtgattactgtgagatttagagacaaaatcaca
tcaggcaggaaacgaactgccaacgattgccagacaatttacacagcatttaccttatgt
aaggtgaacatggaaaccctggaagctattgcttgcctggcatcagagcttgatgtggtg
gcatcagatttcagctatgcgggcatcaaggacaagaaagctattacttcccaatcgatg
gtggtaaagaatgtgacaattaacaagttaaaagcaaagcaattatcaatccagagcaaa
ggcctgaaagtgtataacctgcgccgtgcaactaagcacttacgggtgggccagctgaaa
ggaaaccatttcagtattatcatcagaaacatcagcaagcaccaagaagatgaccctgac
agcagtcttacttctcgagtgttggaagcaattgagaatgtcaaggagaaaggatttgtg
aactactatggacctcagcgatttggtctgggacaaaatgttcaggcagatcagattggt
ttggcgcttctcaagggaaaattggtggaggctgtgcatttagtctttacagcagaagaa
ggagatgaccctgtcaatcaggccaagagacattttattcagactgaggatgccaagggg
acacttgctctgatgccagagtacaaaacaagagagcgaatgatgttgcgtgcattaaac
cgctatggcaacaatcaggagggttgtgcccgggcctggtttagtttaccacactccatg
cgtgtactttacgtccactcgtattgcagtaaggtctggaatagagctgcctcttttcgc
ttgaggacttatgacttgaaggttgtagagggagacttagttgcctgtgataacctcgag
tgggatccattgaatcaggaaaatgctcaggtgcacgttgtgacagctgaagatctgaag
tcaaacatttactcgattaaccaagtcgttcttccaatgcctggtaacagtgtccagtat
ccatgcaataaacttgcattatggtatcaggaaactttggctagggatggactgcaggga
tgcaagtttagaatccctgcattgcaactgaacatacctggatgctaccggcgcctccta
gcacaacctcagcaactagtgtttcggtggttggaggacaaggaaatgtcatttgcacaa
gaaggctgcgtctttgcaactgatgagtccaatcagcctcaagaaatgagagactctctt
tctgtgtccttcagtctgaattcgtcatgctatgcaacaatatgtttgagagaaatcatg
aaatttaatgtgtaa
DBGET
integrated database retrieval system
