Chiloscyllium punctatum (brownbanded bambooshark): 140458481
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Entry
140458481 CDS
T11285
Name
(RefSeq) nuclear receptor ROR-alpha A isoform X1
KO
K08532
RAR-related orphan receptor alpha
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
cpun03000
]
140458481
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
cpun03310
]
140458481
Transcription factors [BR:
cpun03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
140458481
Nuclear receptors [BR:
cpun03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
140458481
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
140458481
NCBI-ProteinID:
XP_072409242
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Position
33:22245124..23160127
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AA seq
517 aa
AA seq
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METVQPAPATVTVTAAASLESAGSRGGHSVPRGGGGEHGAPARRHSCSSTNRGISVTKKT
HTSQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNATYSCPRQKNCLIDRTSRN
RCQHCRLQKCLTVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQQQRDHQQQPGEAEPLT
PTYNGLTELNNDLSNLYMDGHTPEVGKADSGMNNFYLDIQPSPDQSGLDINGIKQEPICE
YAAVPDFFPYCSFTNGESSPTVSMTELEHLAQNISKSHIETCQYLREELQQITWQAYVQE
EVEIYQNKPREVMWQLCAIKITEAIQYVVEFAKRIDGFMELCQNDQIVLLKAGSLEVVFV
RMCRAFDPQNNTVYFDGKYAGPDIFKSLGCDDLINSIFEFGKGLCMLHLVEDEIALFSAY
VLISADRLWLQEKIKVEKLQQRIQLTLQHILQKHHREDGILTKLLSKVSTLRTLCNRHIE
KLSSFKALHPDIVRVHFPPLYKELFSSEFEQMMPTDG
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atggagaccgtccagccggcaccagccacagtcacagtcacagccgccgccagcctggag
tcggccggctccagaggcggacacagcgttccgagaggcggcggcggtgagcacggagcg
cccgcccgccgccacagctgctccagcaccaaccgaggtatttcagtcacaaagaagacg
cacacatctcaaattgaaattatcccatgcaagatctgtggagataaatcgtcaggaatc
cattatggcgtcattacatgtgaaggctgcaagggtttcttcaggagaagccaacagagc
aatgctacctactcatgccctcgacaaaagaactgcctcatcgaccgaacaagccgcaat
cgatgccagcactgccgattacagaagtgcttgacagtgggaatgtctcgagatgctgtc
aagtttggtcggatgtccaagaagcagagagacagtctgtatgctgaggtccagaaacat
cgtctgcagcaacaacagcgagaccaccagcagcaacctggggaagcggaacccctgact
ccgacatacaatgggctgacagaactgaacaatgacctcagcaacctttacatggatgga
cacactccagaagtgggcaaagctgactcaggaatgaacaacttctatctggacattcag
ccatccccagaccagtccggtctagacatcaatggtattaaacaggagcccatatgtgaa
tacgcagcggtccctgacttttttccatactgctccttcacaaacggtgaaagttccccc
actgtctcaatgacagaactagagcacctcgcacagaacatctcgaagtcccacattgaa
acctgccagtacctgcgggaagagctgcaacagataacatggcaagcctacgtgcaggaa
gaagtagagatttaccagaataagccccgggaggtgatgtggcagctttgcgcgatcaag
ataactgaagcgattcagtatgtggtggagtttgcgaaacggatcgatggattcatggaa
ctgtgtcaaaacgatcagattgtacttctgaaagcaggttctttagaagttgtgtttgtc
cgaatgtgtcgagcctttgacccacagaataacacggtttattttgatggcaaatatgct
ggtccagatatcttcaaatcattaggttgtgacgacttgatcaactccatctttgaattc
ggtaaaggtttgtgtatgttgcacctcgtggaggacgagatcgccttgttttctgcctac
gtgctgatctctgcagatcgtctctggctccaggagaagataaaagttgaaaaactgcaa
cagagaattcaattaacactccagcatattttgcagaaacatcacagagaggatggcatt
ctgacaaagctgttatctaaagtgtctacgttacgaacactgtgtaatcggcacattgag
aagctgtcctcgttcaaagcattacacccggacattgtgcgggtacatttccctccgttg
tataaggagctgttcagctccgagtttgagcaaatgatgccgacggatggttag
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