Chiloscyllium punctatum (brownbanded bambooshark): 140463034
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Entry
140463034 CDS
T11285
Name
(RefSeq) collagen alpha-1(XIV) chain-like
KO
K08133
collagen type XIV alpha
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
cpun00535
]
140463034
Proteoglycans [BR:
cpun00535
]
Extracellular matrix (ECM) proteoglycans
Others
140463034
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
VWA
fn3
Collagen
VWA_2
FN3_DSCAM-DSCAML_C
Fn3_PBP1
Motif
Other DBs
NCBI-GeneID:
140463034
NCBI-ProteinID:
XP_072412744
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All DBs
Position
37
Genome browser
AA seq
1861 aa
AA seq
DB search
MNVEKSCVLTSVIVLLHLISQAEGQGRLKLTVLSEDRLQMKWKEVDGNRQGYKVRVKPSA
GTLDREIILKTNIAKATVVGLSPTQEYTLQILLLNGTREHHYAKRKFILNVLKQQHLEKV
LKRKQDKKKILGIAGENGTQLDFSFSESNSTELHQIETLHGLQSKKVKSPERKKSSDKTM
ENKMKGRLSITANESGRISQVKNTTQTLPKNKRKIVQDKRKEEPVFEEFPAKGSQFKCQL
STAADIIILIDGSWSIGRVNFRLVRQFLINLITPFHVDMNGIRIGLTQYSGEPRTEWDLN
TYSSTNEVLEAVQKIRYKGGNTYTALALNHIFKNTLKPSAGARPKTAKYLILLTDGKSQD
DVNSSAQSLKNAGVEIFAIGVKNADVAELKQIASDPLELHVHNVLEFSLLDSLSNRLTKI
LCGQIKTKAIKVKSENEKPDSGTILYPTPTNLVISDVTARSFKVSWTHGPKKAKQYRVVY
YPTKGEIPKEVIVDGTVSSVILEDLHSLTEYQMAVFPIYEDFVGEGLRGIGNTSSFPSLN
NLTIYDVTHDSMRIKWDPQEGATQYMILYEQVSNDGMDDGKEVRVDAQDTDIEIEGLSAS
AEYVVTAYALYGEETSEPVTAQQATFSLQAPANVRLTELRHSSVKVNWETASRKVRGHRI
TYVAANGNDPKQVEVAGDVENVLLKNLTSLTKYVITVLSIYDTGTSLPVTITGETIKVPP
PSDLKVTEFLGTNLTIMWKHAASDVVLYKIKWIPLSGGKLKELDVKGNMDTTVLQGLEKN
VEYQVSLSALYNDTAKSNAIVLRYNTFSRDPPSNLLIETKTPTSLQISWSHSSANVQHYK
ISYMDVKGGHAREMIVPVKRNNIVIQALTADTVYEVTVTAVYTSGDDASISREGKTLPFN
PPTNLRISEVWYNHFRVMWDKADTQPLGYAVIYQAAPDQTMEVMTGEDADSIVIKNLQPG
LEYNVEVFAVYPNGNSTTVTGKATTLYLNVTDLHTYQVQLTSMCAKWEGHPQSSTFRIVL
ESMKGEKTQENTLHAGQDTYCFRLLFPNTLYKITVYPRLQDMEGPAASVLQSTLPLPTRS
TFVSSTAPVAFKACHDITADLNFIIDGSRSVGGMNFKKIIAFLYDSISVFDKIGPDGIQV
SVNQFNDRMRNEIQYGSFGSKEKLLGAIYDIPYRGTDSNTVKGSRPSNDPFSKEETLRRR
GVHKILIVITRGTILDEIHQTLQELGLKGFFTFILGVDDADEDKINEIAVTPSMRTVWHV
NDFDDLSAVGNKFISSICQIVSTTCPLINIKDTVVPGINMMEAFGLDVREYSELEGVSMQ
FDIFTGLPSYIIFENAQLTQTTRNIHPTGLPPEYTITLLFRLLHNTPKEPYAIWQIVDED
FQPLVGVVLNCNQQTLKYFHLDYKSELQEVTFNQPEVKKVFFGSFHKVHIAVSRTTVKLY
IDCMEIGEKSMNVLGKISTQGFEILGKLVNTKGPGSQSMPFQLQAFEMVCNTSWADMDNC
CDLPALRDEVACPPLIRACTCSSTVQRRLGPLGLPGPPGLRGAQGERGEPGSRGPEGPIG
SPGPRGSEGQPGPPGPRGLSIRGPSGPPGEKGQKGDSGQRNSQGPPGPPGPPGAEGLQGP
KGTRGLEGAMGPPGLPGPRGPPGITGPSGYPGDRGSPGKVGPSGLPGAKGEKGEKGELQP
LATVYQLVTQACEELVQNHMMKFDSILTEFTRNPAPVRIIQGPAGEIGRPGKPGPPGSRG
PPGIPGMPGDDGKAGYPGEIGKPGDKGEKGSPGVSAPGSEGPRGSPGSQGEGKRGKQGPQ
GLPGPPGRPGLPGLPGTTGPPGPAGHCDVSTCSTFNPGGESEFESEVESEFESDGELQYL
P
NT seq
5586 nt
NT seq
+upstream
nt +downstream
nt
atgaacgtagaaaagagctgtgttcttacctctgtaatcgtgctgcttcatctgatcagt
caagcagagggacaagggagattgaaattaactgttctgtctgaagatagactgcagatg
aaatggaaagaggttgatggaaacagacaggggtataaagtacgagtaaaaccatctgca
ggtaccttagaccgggaaataatcttgaagacaaatatagcaaaagcaacggttgttggc
ctttctcccactcaagagtacacactgcaaatattactattaaatggaacacgggaacat
cactatgccaaaaggaaattcattttaaatgttctgaaacaacaacatttagaaaaagtt
ctcaaacgtaaacaagacaaaaagaagattttaggtatagcaggagagaatgggactcaa
ttggactttagtttctctgaaagcaattcaacagagttgcatcaaatagaaacattgcat
ggactacaatcaaaaaaagtgaaaagtccagaacggaaaaaatcatctgataagacgatg
gagaataaaatgaaagggagattgagcatcactgcaaatgaaagtggaagaatatcgcag
gtgaaaaatacgacacaaactttgcctaaaaataaaagaaaaatagtccaagacaaacga
aaggaagaaccagtatttgaagaatttcctgccaagggatctcagttcaagtgccagttg
agtactgctgctgatatcataattctaatcgatgggtcctggagtattggcagagtaaac
ttccgattggtgcgtcagtttttgataaacttaattacaccttttcatgttgatatgaat
ggaattagaattggattaactcagtacagtggtgaaccaaggacagagtgggacctgaat
acttactcaagcacaaatgaggtgctagaagcagttcaaaaaatacgctacaagggaggc
aatacttacacagctcttgccttgaatcatattttcaaaaacaccctaaaaccttcagct
ggtgctaggccaaaaacagcaaaatatttgattctgcttaccgatgggaagtcacaggat
gatgtcaactcatcagcacaaagcctgaagaatgctggtgttgaaatatttgcgattggt
gtaaaaaatgcagatgtagctgagctgaaacaaattgcatctgatccgcttgaacttcat
gtgcacaatgtacttgagtttagtcttcttgactcacttagtaaccgactcacaaagatt
ctttgtggacagatcaagacaaaggcaatcaaagtgaaaagtgaaaatgagaagcctgac
agtggtaccattttatacccaactccgacaaatctagttatttctgatgtaacagccaga
agtttcaaggtcagctggacacatggaccaaagaaagcaaaacagtaccgtgttgtttat
tatccaactaaaggagaaataccaaaagaggtgatcgtggatggaacagtttcatctgta
attctggaggatttacactctctcactgaataccaaatggcagtatttcctatctatgaa
gattttgttggtgaaggtctccggggcattggaaatacatcatcttttccatcactgaat
aatcttacaatctatgatgttacacatgacagtatgagaattaaatgggatcctcaagaa
ggagccactcagtatatgatcctgtatgagcaagtttctaatgatggaatggatgatgga
aaagaggtgagagttgatgctcaggacacagatattgaaatagaaggtctctctgcaagt
gcagagtacgttgtaacagcttatgctttatatggagaggaaacaagtgaaccagtaact
gcacagcaagcaacattttcacttcaagccccagcaaatgtgcgcctcactgaacttcgt
cacagtagtgttaaagtaaactgggagacagcttcaaggaaagtgaggggtcatcgtatc
acttatgtggcagccaatgggaatgatcccaaacaggttgaagttgctggggatgttgaa
aacgtactactgaaaaacctaacttcattgacaaaatatgtaatcactgtactttctatt
tatgacactgggacctctttgcctgttaccattactggagaaacaatcaaggttccacct
ccatcagatctgaaagttactgagtttttaggcaccaatttaacgattatgtggaaacac
gctgccagcgatgttgttctgtacaaaataaaatggattccccttagcggaggaaaatta
aaagagcttgatgtcaaaggaaatatggacacaacagtgttacaaggtctagagaagaac
gtcgaatatcaagtatcgctgtctgcactgtacaatgacacagcaaaaagcaatgccatt
gttctccgctataacacattttccagagatccaccatcaaaccttctcatagaaaccaag
acaccgaccagcctccaaatcagctggagtcattcaagtgcaaatgttcaacattacaag
atatcatatatggatgtcaaaggtggccatgctagggaaatgatcgtacctgttaagaga
aacaacatcgtaatacaggcactaactgcagacactgtgtatgaggtcacagtcactgcc
gtctatacttcaggtgatgacgccagtatatccagagagggcaaaaccttaccatttaat
ccaccaactaacctgcgtatctcagaagtttggtacaatcatttccgagttatgtgggat
aaagctgacacacaaccactaggatatgctgtgatttatcaggcagctcctgatcaaacc
atggaagtgatgacaggagaggatgcagattcaatagtaattaagaatctgcagcctggc
ctagaatataatgttgaagtatttgcagtctatccaaatggcaacagcacaactgttaca
ggaaaagctacaactttgtacttgaatgtaactgatcttcatacatatcaggtccagttg
accagcatgtgtgctaagtgggaaggacaccctcaatcctcaactttcaggattgtctta
gagtccatgaaaggtgaaaagacacaggaaaacactttgcatgcaggccaagacacatat
tgtttcagactactctttcccaatactctgtacaagattactgtgtacccacgcctacaa
gatatggagggacctgctgcttcagttcttcaatccacattgccacttccgacaagatct
acatttgtttcaagtactgctcctgtggccttcaaagcttgccatgatattacagccgat
ttaaactttataatcgatggatccaggtctgtaggaggaatgaatttcaagaagatcatt
gcatttttgtacgatagcattagtgtttttgacaaaattggcccagatggaatacaggtg
tcggtgaatcagtttaatgatcgcatgaggaatgaaattcagtatggctcctttggcagt
aaagagaagttactgggagcaatctatgacataccttacagaggaactgattctaataca
gtcaaaggtagcagaccatccaatgatcctttttccaaagaagaaacactgaggaggcgc
ggtgttcacaaaattttgattgtgatcactcgtgggaccatactggatgaaatacatcaa
acgctgcaggagttaggattgaaaggcttctttacctttattcttggcgtcgatgatgct
gatgaggacaaaattaatgaaattgcagtcacacctagcatgagaactgtatggcatgta
aatgattttgatgatttaagtgctgttggaaacaaatttatctcatccatttgtcagatt
gtctctacaacttgtcccttaataaatattaaggacacagtcgtgccaggaattaacatg
atggaggcatttggcttagatgtcagggaatattcagaacttgaaggagtttctatgcag
tttgacatctttacaggcttaccatcatatatcatttttgaaaatgcgcagcttacacag
accaccaggaatatccaccccacaggactacctccagagtacacgattacattgctcttc
cgattactgcataatactccaaaagaaccatatgccatttggcagatagtagatgaagat
tttcagcctcttgttggagtggtgcttaactgtaaccaacaaactctgaagtactttcat
cttgattataagagtgaattacaagaagttacttttaatcaacccgaagttaaaaaagtt
ttctttggaagttttcataaggtccatatagcagtgagtaggacaacggtcaaactttat
attgactgcatggagattggagagaaatccatgaatgttcttgggaaaatctccacacaa
ggttttgagattctagggaaactggtaaatacgaagggccctggcagtcaatcaatgcca
tttcagttacaagcatttgaaatggtttgtaatacatcatgggctgacatggacaactgc
tgtgatctacctgcactgagagatgaagtggcgtgtcctcctcttatccgtgcttgtact
tgttcatcaactgtccaaagacgacttgggcctttaggactcccaggtcctcctggttta
agaggagcccagggtgagcgtggggaaccaggatcacggggtccagaaggtccaattggt
agtccagggcctagggggtcagaaggccaaccaggacctccaggaccgagaggactcagt
atccgtggaccttcaggtcctcctggtgaaaaaggtcagaaaggtgactctggacaaaga
aatagccagggtcctccgggtcctccaggtcctccaggggctgaaggccttcaaggacca
aagggtacaagaggactggaaggtgcaatgggacccccaggacttcctggaccaaggggg
ccacctggtatcacagggccatcaggttatccaggggaccgaggttcaccaggaaaagtg
ggaccatcaggtctccctggtgcaaaaggagaaaaaggtgaaaagggagaacttcagccg
cttgctacagtttatcagctggttacccaagcctgtgaggagcttgttcagaatcacatg
atgaaatttgattcgattctgactgagtttacaaggaacccagcacctgtccgaatcata
caggggccagcaggagaaatagggcgcccagggaaaccaggaccaccgggaagtagaggg
cctcccggaataccaggcatgccaggagatgatggcaaggctggctacccaggagaaata
ggtaaaccaggtgataaaggagagaaaggtagcccaggagtcagtgctccagggtctgag
ggaccaagagggtctccaggttctcaaggtgagggaaaacgtggaaaacaaggaccacag
ggcttgcctggcccaccaggccgtcctgggctaccaggtcttcctggaaccactgggcca
ccaggtcctgcaggacattgtgatgtctctacctgcagcacatttaacccaggaggagaa
tcagaatttgaatctgaggttgaatcagaatttgaatctgacggtgaattgcaatacctg
ccttaa
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