Chiloscyllium punctatum (brownbanded bambooshark): 140463349
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Entry
140463349 CDS
T11285
Symbol
mms19
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog isoform X1
KO
K15075
DNA repair/transcription protein MET18/MMS19
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
cpun03036
]
140463349 (mms19)
03400 DNA repair and recombination proteins [BR:
cpun03400
]
140463349 (mms19)
Chromosome and associated proteins [BR:
cpun03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
140463349 (mms19)
DNA repair and recombination proteins [BR:
cpun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
140463349 (mms19)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MMS19_C
MMS19_N
TOR1L1_N
HEAT_ECM29
HEAT_EF3_N
Vac14_Fab1_bd
HEAT_2
Ric8
POTRA_3
HEAT
Motif
Other DBs
NCBI-GeneID:
140463349
NCBI-ProteinID:
XP_072413275
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Position
38:12442826..12512320
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AA seq
924 aa
AA seq
DB search
MSSVLPEGLAVTMLKALFQEVHVQSLMQSDRHSVYTIISNLMDTREQELKSLAADFTFGF
IQAMDGEKDPRNLLMAFQISRDIIVNNYELGNFVEEFFEITSCYFPIDFTPPPNDPHGIS
QEELVLSLRSVLTATPRFAEFLLPLLIEKLDSDVQSAKVDSLRTLTTCCRNYRKKELKEF
LPALWHSIRREVFQTASEKVEAEGLAALQALSTSLSKSVIDSDAEDSLDAFLNNVLQDCK
HHLCEPDMKLVWPSAKLLQAAASASYRACSKINSCIFPLLLEQFNKHKQSSQRWTILGIL
KIFIKLIQKWDRDEEDENPLCAFKDQLCVLVFSALTDSSVQLQMVGTSTLAVLASQQDLL
SSSDIELSVDHLNRLILQEADPQVCAAALEASTIISAIQPSAFITKMVPALTQDLNTERM
EVKDDGEPLAPSGNALHQRSIQALAAISTHPSIVKRTVPVLLQHLTNLQKGTSGNESDMA
ILICQSLQLVAEHCRGAEESSQYFHQMVVPCLLGLAIQTAVQDCASEIRLGILCEEQVIT
AFGTVISTAYSDGETERASRTISQIVALYLDGDVSSLPENNLCRKFQPFQSPDSPWPQTQ
LIALLQAAVCSLPKNIIVPQQERLLERLMELACTSDHRFTYTSAAKCIAGLINKYPAGEQ
LDSVLQDVLKKIDSGLERNAGVCAQATSRTRVFTLLLWLTKSLVLRYHSLAATLTDKLIQ
LLTDPELGTEAADGFSVLVSDSSDVLNKATHADIRIMYRQRFFTENVPKLVQGFHSASED
NKSNYLKALSHVLNSLPKQVLMTELPSLLTLLLEALSCSDQVVQLSTLGCLHPLLLDATQ
TMSLHVDTLVNKLLNLTSSPAMKVRIASLQCMHALTKLPPHVILPHKPRVIQALAKPLDD
KKRLVRKEAVRARGEWFLLGSPGS
NT seq
2775 nt
NT seq
+upstream
nt +downstream
nt
atgagctctgttctgccagaagggttggctgtaacaatgttgaaggcattgttccaggag
gtacatgtccagtccctgatgcaatctgatcggcattctgtgtacaccatcatctcaaat
ttaatggataccagagagcaagaactgaagagtttggcagcggacttcacatttggtttt
attcaagcaatggatggagagaaggacccacggaatttattaatggcttttcaaatctcc
agggacatcatagtcaacaattatgaacttgggaactttgtggaagagttctttgagatc
acttcatgctattttcctattgattttacaccgcctccaaatgacccacatgggatatct
caggaggagttggtgttgagcctgcgatctgtacttactgccacaccccggtttgcagag
ttcctattgccactcctgattgagaaactggattcggatgttcagagtgccaaagtggat
tcccttcggactctgacaacatgctgcagaaattataggaagaaggagttgaaagaattc
ctaccagctctttggcactctatacgcagagaggtctttcagacagcaagtgaaaaggtt
gaagctgaaggtcttgctgctctccaggcactatcaactagtctgtccaaatcagttatc
gattcggatgcagaggatagtctggatgcattcctcaataatgttctacaagattgcaag
catcacctgtgtgaaccagacatgaaactcgtgtggccaagtgcaaagctgctccaggca
gctgcgagtgcttcctacagagcatgctccaagatcaacagctgcatatttcctctgttg
ctggaacaattcaataaacataaacagagtagccaacgttggacaatcttgggaattttg
aaaattttcattaaactaatccaaaagtgggaccgagatgaggaagatgagaatcccctg
tgtgcctttaaggatcagctttgtgtcctggtattctctgcactgactgattccagtgtc
caactgcaaatggtggggactagcactttggcagttctggcatcacagcaagatttgctg
tcttcctccgacatagagttgagtgtagaccacttgaacagactgatcctacaggaggct
gaccctcaagtttgtgccgcagcattggaagcttccacgatcatttctgcaatccagccc
tctgctttcatcactaagatggttccagcactgacgcaagatttaaacacagaacggatg
gaagtgaaggatgatggcgaacctcttgcaccgtctggtaatgctctgcatcaacgcagt
atacaggctttggctgccatttccacacaccctagtatagtgaagaggaccgtcccagtc
ctgctgcagcatttgaccaatttacagaaagggacttcaggcaatgaaagcgacatggcc
atcttgatctgccagagcctgcagctagtggcagaacactgtcggggtgctgaagagagc
agccagtactttcaccaaatggttgttccatgcctactgggactggccatccagacagct
gtgcaagactgtgcgtctgagatccggcttggcatcctgtgtgaggaacaggtaatcacg
gcgtttgggactgtgatcagcactgcctatagtgatggcgagacagaacgagcttctaga
acaatctcccagattgtggccttgtaccttgatggggatgtctcctccttgcctgaaaat
aacctttgcagaaagttccagccttttcagtcaccggattctccgtggccacaaactcag
ctgattgctcttctgcaggctgctgtctgctccctgccaaagaacataatagtaccacaa
caggagaggttgttggaacgactaatggagctagcttgcaccagcgaccatcgattcact
tacacgtctgctgctaaatgcattgctggcctcatcaacaaataccctgcaggtgaacaa
ttggactctgttctccaggatgtgttgaaaaagattgacagtgggctggagaggaatgct
ggagtttgtgcacaggctactagcaggacccgagttttcaccttactgctgtggttaaca
aaatcacttgtgctgcgctatcactctcttgctgccacattgactgacaagctgatacag
ctgctcactgaccccgagctgggaactgaggcagcggatggattctccgtgttggtcagt
gactcctccgatgtcctgaacaaggccactcacgccgacattcgcatcatgtaccggcag
cgattcttcaccgagaacgtccccaaactggtccagggcttccactcagccagtgaagat
aataagtcgaactaccttaaggcactttctcacgtgttgaacagtcttccgaagcaggtc
ctgatgacagagctcccgtcgctgctgactctgttgttggaggctttgtcgtgctcagac
caggtggtccagttgtccacactgggctgtttgcatcctcttttgctggacgccactcag
accatgagcttgcatgtagatactttagtgaacaaattgctcaatctgacttccagccct
gccatgaaagtccgtattgcgtccttacagtgcatgcatgcactgactaagctgccgcca
catgtgatcctgccccacaaaccccgggtaatccaagccctggctaaacccttagatgac
aagaagcgactggtgaggaaggaagcagtcagagctcggggagaatggtttcttttaggg
agcccaggcagttga
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