Chiloscyllium punctatum (brownbanded bambooshark): 140463384
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Entry
140463384 CDS
T11285
Symbol
taf5
Name
(RefSeq) transcription initiation factor TFIID subunit 5
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
140463384 (taf5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpun03021
]
140463384 (taf5)
03036 Chromosome and associated proteins [BR:
cpun03036
]
140463384 (taf5)
Transcription machinery [BR:
cpun03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
140463384 (taf5)
Coactivators
SAGA/TFTC/STAGA complex
140463384 (taf5)
Chromosome and associated proteins [BR:
cpun03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
140463384 (taf5)
STAGA complex
140463384 (taf5)
TFTC complex
140463384 (taf5)
SAGA complex
140463384 (taf5)
SLIK complex
140463384 (taf5)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR5
Beta-prop_IFT122_1st
WD40
Beta-prop_WDR3_1st
Beta-prop_THOC3
WD40_Prp19
WD40_CDC20-Fz
TFIID_NTD2
Beta-prop_WDR3_2nd
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_WDR36-Utp21_2nd
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML
Beta-prop_VPS8
WD40_MABP1-WDR62_1st
DSE1_N
NBCH_WD40
Beta-prop_SCAP
Beta-prop_WDR75_1st
ANAPC4_WD40
Beta-prop_Aladin
PAC11
Beta-prop_TEP1_C
Beta-prop_RIG_2nd
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
CFAP251_N
Beta-prop_WDR41
Beta-prop_Vps41
Beta-prop_EIPR1
Beta-prop_DCAF4
WD40_RFWD3
ASA1
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_NOL10_N
Beta-prop_DCAF12
WD_LRWD1
Beta-prop_Nup120_160
Tricorn_2nd
DNAI3_WD
LisH_PAC1
Cytochrom_D1
Beta-prop_ACSF4
PROPPIN
ABM-like
Beta-prop_WDR11_2nd
RAB3GAP2_N
Motif
Other DBs
NCBI-GeneID:
140463384
NCBI-ProteinID:
XP_072413354
LinkDB
All DBs
Position
38
Genome browser
AA seq
783 aa
AA seq
DB search
MAAVSEPAAAQSEAPASASTPGPGPGPGPGPGPGPGPAPSPSPGPTPAPTPSPAPSPSPT
PSPTLVPKLEPSESPAENHKPGPAAGPAPAPAPAPAPAPAPVPVPVPGPAPAAVPTPVPG
PAPELPDKQTLLAVLQFLKKNHFKEAEEILRKEANLQESLDESLLRTAGHRGSDSVHQPD
VSSVLSAYSNEGDPSLYEEYYTGLKGFIETALDAFKAELSTLLYPVFVHLYLELVYNEHE
REARHFFHKYHGDQEGYYHDDLRVLAGLSKKEHMQGNETVLDFRTSKFVLRISRDSYQCL
KRHLQERHNNQIWNIVQEQLFIDVFDGMPRSKQQIEVTSGGMAGEAKREANKTKVFFGLL
KEPEIELPLDDEDEEGENEEGKPKKKKPKKDSLGAKSKKQDPNAPPQNRIPLPELKDSDK
LDKIMIMKEATKRVKLGPDCLPSICFYTFLNAYQGLTAVDFTDDSSLIAGGFADSTVRVW
SVTPKKLRSVKGATDLSLIDKESDDVLERIMDEKTACEFKMLLGHGGPVYGTSFSPDRNY
LLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFISGGHDRVARLWVTDHY
QPLRIFSGHLSDVTCTRFHPNSNYVVTGSADRTIRLWDVLNGNCVRILTGHKGPIHSLVF
SPNGRYLASGATDGRILLWDIGHGLLVGELKGHTDTIYALKFSRDGEILASGSMDNTVKM
WDTVKAFEDLETDDFSTATGHINLPDNSQELLLGSYMTKSTPVIGLHFTRRNLLLAAGAY
NPQ
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggtgtcagagccggcggcggcacaaagtgaggccccggcgtcggcctcaact
ccaggcccaggcccaggcccaggcccaggcccaggccctggccctggccctgctccgtcc
ccttccccaggcccaaccccagccccgacaccttctcccgctccttcaccgtcccccacc
ccctctcccaccctggtccctaagctggagccgagtgaaagtccggccgaaaaccacaag
ccgggtccggccgcaggcccagctccagccccggccccggcccccgccccggcaccagcc
ccagtcccagtcccggtcccgggccccgctcccgctgcagtcccgactccagtcccgggc
ccagcgcctgagctgcccgacaaacagacgctgctggctgtgctgcagttcctgaagaag
aaccacttcaaagaggccgaggagatcctgaggaaggaggccaacctgcaggagagcctg
gacgagtcgctgctgaggacggccggccacaggggatcggactcggttcatcagcccgac
gtcagctcggtgctttcggcctacagcaatgagggcgacccgagcctatacgaggaatac
tacaccggcctcaagggcttcatcgagacggcgctggacgccttcaaagccgagctgtcc
actctcctgtacccggtcttcgtgcatctttacctggagctggtttacaacgagcatgag
agggaagctcggcatttcttccacaagtatcatggggatcaggaaggatattaccatgac
gacctgcgagtactcgctggcctgtcgaagaaggaacacatgcaggggaatgagacagtg
ctcgattttcggaccagtaagtttgtgctacggatttcacgggactcataccagtgcctg
aaacgtcacttacaggagaggcataataaccagatctggaacattgtgcaggagcaactg
ttcatcgacgtgtttgatgggatgccgaggagtaagcaacagattgaggtgacttctggg
ggaatggccggagaagcaaagagggaggcaaacaaaaccaaggtgttctttgggttgttg
aaggagccagagattgagcttcctcttgacgatgaggatgaagaaggagagaacgaggag
gggaaaccaaagaagaaaaagccaaagaaggacagcctgggtgcaaagagcaagaagcag
gaccccaatgccccccctcagaacagaattccacttcctgaactaaaagattctgacaaa
ctggacaagataatgataatgaaggaagccacaaaacgggtgaagctggggccggactgt
ctgccctccatatgtttttacactttcctgaatgcttaccagggactcactgcagttgac
ttcacagatgattctagtctgatagcaggaggttttgctgattccactgtcagagtatgg
agtgtcacgcccaagaagttgcgcagtgtcaaaggggctacagatctcagtttaattgac
aaagagtccgatgatgtgctggagcgaataatggacgagaagactgcctgtgagtttaaa
atgctactgggacatgggggcccagtttatgggacaagtttcagtcctgacaggaactat
ctgctgtccagttctgaggatggcacagtcagactctggagtctgcaaaccttcacctgt
ctcgtgggctacaaaggacataactatccagtgtgggatacgcagttttctccgtatggc
tactatttcatttcagggggccacgatcgggtggcacggctttgggtgactgaccattac
caaccgctgcgaatattctctggtcacctctctgatgtcacctgcacgagatttcatccc
aactcaaattatgtagtgacaggatctgcagacaggaccattcgactgtgggatgttcta
aatggcaactgtgttcgaatcctcactggacacaagggaccgatccactcattggtgttc
tctccaaatggtagatacttggcctctggagctacagatggccggattctactgtgggat
atcgggcacgggttacttgtaggcgagttaaaaggtcacactgacacaatctacgcactg
aagttcagccgcgatggggagattctagcctcaggttctatggataatacagtgaaaatg
tgggacactgtcaaagcatttgaggacctggagacggatgatttcagcactgccactggc
catattaacttgcctgacaactcgcaggagctgttacttggctcctacatgaccaaatcc
accccagtcattggcctgcactttactcgccgtaacctattactggctgcaggggcatat
aacccacagtga
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