Chiloscyllium punctatum (brownbanded bambooshark): 140463406
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Entry
140463406 CDS
T11285
Symbol
rrp12
Name
(RefSeq) RRP12-like protein
KO
K14794
ribosomal RNA-processing protein 12
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
cpun03009
]
140463406 (rrp12)
Ribosome biogenesis [BR:
cpun03009
]
Eukaryotic type
90S particles
Other 90S particles
140463406 (rrp12)
Pre-60S particles
Other pre-60S particles
140463406 (rrp12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRP12_HEAT
HEAT_RRP12_N
HEAT_GCN1
TOR1L1_N
Motif
Other DBs
NCBI-GeneID:
140463406
NCBI-ProteinID:
XP_072413406
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Position
38:17303205..17360083
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AA seq
1290 aa
AA seq
DB search
MSRSGRLRSGVKPKLKRWRKGQSSESNPETHRFRDAARSGFFSKPAGKSDLTVDVLKLHN
DLQSNSSLFDPRESSAEDPFSKCEEGAPSEETTGTFLSGLSDCSNLTFRRVQRLWESNSA
AHKEVCAVLAAVTEVIRSQGGNETETEYFAALMTTLEAVESEESIAAVVYLLNLVMRRVP
GPVLTKKFSDTAKVFMNLLSAQVNSGSIAGLRWILACLSTLLRRQDLTVWSFPSTLQVYH
GVLSFTVHVKPKVRKEAQRSICSILKGSDFMFGDLAPPHHPAAQSTARFCIKEIEESGGG
DQGTTTLHVLGLLKDVLPCFPVSCVKSCCETLLRVMTLSHVMVTACAMQAFHGLFVAKPN
SAVLTGELNAQIITALYDYLPNIGDLQPVLAWLTVMEKAHISLCRLQGSLCLAHLPRLFC
TAVSCLLSSHTQLVAAAAETMKVLLRECVAPFANDIGVFTSSSPSGPASYICKMFRAVED
GLTYRFHASWAFVLQVLSTFFEVIGKQAYPVMKQCVQTLCDLRETPYFAHTKELDRTVGM
AVECMGPESVLQAVPLQIDGTEETFDFPRSWLIPVIRDHVKHTRLTFFNQYFLPLAANLK
NRALELAQSGRSLEAKIYDTLQWQIWTMLPGFCTKPTDTAVAFKGIARTLGTVISDRPDL
RLTICQALRTLINKGCENETDRAEVSRFSKNFLPVLFNVYSTEPASGESAAYRLPVLDTI
KVYLTLTDQQLVCGFLDKAIEKLKKAECSEFTRLSLMDLIVAMAPVVDELSMNNIFQTIL
PFLQSKDHHIQKKAYRILEEMCGGEREACRQFVHKHLEEMKETLLGSLKSAASPAKRPRL
KCLIHIVKQLSVEHQPFIVALLPEVIICMKEVSIGARRNGYTLLIEFGRAFLRFYEDSRE
AVGQYLALVYAGLTGSVTMISCTVLALTRLVFEFKDQMDVSTIEQLLQNICLLLQSKTRD
VIKSALSFIKVILFIMDTKVLAQQLQLLMESIGNLRDDMRRHFRVKLKNIFTKFIRKFGF
EMIDSMIPEEYHRVLVNIRKAEARNKRQRALKRAESGSENEDETPKQNGDSIEEILAESD
SDEEVMEKAEKVTKKQIVQKSSAWLKEGEADEPLNFLDQKVAQRVLATKPELKKKASIKH
DFPVLSDGRLVISQGAKDDQLKDSEDEANEILEEVGVKTKAAQKQKFKTADDDEEMQTDS
CYKAGGSGIHRQTLSKRNREYGAEYKSTKGRGDVKQRGKLDPFAYVPLNKSQLNRRKKAK
ICGQFKGLVRAARKGAEAGRRLQKKKRRLQ
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcggagcgggcgtctgcggtccggagtgaagccgaagctgaagcgctggcggaaa
gggcagagcagcgaatccaacccggagacccaccgcttccgggacgccgcgcggagcggc
ttcttcagcaaaccggccggtaagagtgatctgacagtggatgtgctgaaactgcataat
gaccttcaatccaacagttcattgtttgatccaagagagagttcagcagaagaccccttt
tccaagtgtgaggaaggtgcaccctcagaagaaaccactggcacctttctcagtggcctg
tctgattgcagcaacctgacctttcggcgagtgcagcgtttatgggaatccaactctgct
gcccacaaagaggtatgtgctgttttggcagctgttacggaggtgattcgatctcaaggt
gggaatgagacagagacagaatattttgcagctttgatgaccacactggaagctgtagaa
tcggaggaatcaattgcagctgttgtctatctgctgaatttggtaatgagacgtgttcct
ggtcctgtcctgacaaagaagttctcagacacagcaaaagtttttatgaatcttttatct
gctcaagtgaactcaggatctatagcaggtctgcgatggattctcgcctgcctctccaca
ctgttacgcaggcaggatttgacagtgtggagcttcccgtcaactcttcaagtttaccat
ggtgtcctcagtttcactgtacatgtcaaaccaaaggtccggaaagaagcgcaacgcagc
atctgctctatactcaagggaagtgacttcatgtttggagacttggctccacctcatcat
ccagctgcacaatcgacagccagattctgcataaaggaaattgaggagtctggaggtggt
gatcagggtacaacaactctgcatgtgttgggtttgctgaaggatgtgctcccttgtttc
cctgtcagttgtgtcaagtcatgctgtgagactctgctcagagtcatgactctcagtcat
gtgatggtgacggcttgtgcgatgcaagcatttcacggactctttgttgccaaaccaaac
tcagcagtcctgacaggcgaactcaatgctcagatcataactgctttgtatgattacttg
ccaaatatcggtgacctacagcctgtcctggcctggcttaccgtaatggaaaaagcacat
atcagcctgtgcaggttgcagggttccttgtgtttggctcatctccctcgtcttttctgc
acggctgttagttgtctcctttcatcacacacacagctcgtggctgctgcagccgaaacc
atgaaggtgctgctgagagagtgtgtggctccttttgccaatgacattggtgtatttact
tcatcttccccatctggtcctgcctcctacatttgtaagatgtttagggcagtggaggat
gggctgacctatcgattccacgcttcctgggctttcgtactacaggtcctcagcacattc
tttgaggtcattggcaagcaggcctatccagtgatgaaacagtgtgtgcagactttgtgt
gatctgcgagagactccatatttcgcccacaccaaggagctggatcggactgtagggatg
gctgttgagtgcatggggccagaatctgttctacaggcagttcccctacagattgatggc
actgaggagacgttcgactttcctcggagttggctcattcctgtgatccgagaccatgta
aaacatacacggctcactttcttcaaccaatactttctacccttggctgcaaatctcaag
aacagagcacttgaactcgctcagtctggacgatctcttgaagctaaaatttatgacacg
ttgcaatggcagatttggaccatgctgccaggattctgcacaaaacccacagacacagca
gtggctttcaaaggtattgcgaggactttgggcacagtcatcagtgaccgcccagacctc
cgactcaccatttgtcaggcgcttcgcacgctcatcaacaaaggttgtgaaaatgagact
gatcgagctgaagtgagtcgattttccaagaatttcttgccagtcctgtttaatgtttat
agcacagaaccagcaagtggagagagtgcagcctacagactgcctgtgcttgacactatc
aaagtatacctgactctaactgaccagcagctggtgtgtggatttctggacaaggccatt
gagaagctgaagaaggcagagtgttcagagttcacgcggctgtcacttatggacctgatt
gtggcaatggcacctgtggtcgatgagctcagcatgaataacattttccagaccatcctc
ccattcttgcagagcaaagatcatcatatccagaagaaggcctatcgaatccttgaggag
atgtgtggtggggagagggaagcatgcagacagtttgttcataaacatttggaggagatg
aaagaaacattgctgggatctctgaagagtgcagcctctcctgcaaagaggccaaggtta
aaatgtctgattcatattgtcaaacagctgtcagtggaacatcagccattcattgttgcg
ttgcttcctgaggttataatctgcatgaaagaagtctccattggagctcgtagaaatggc
tacaccttattaattgagtttggacgggcctttttaaggttctatgaagactcgagagag
gctgttggccagtacctggcattggtatatgctggtttaactggatccgtcacaatgatc
agctgcaccgttcttgcactcactcggctagtgtttgaattcaaagatcaaatggatgta
tctactattgagcagctgcttcaaaacatctgtctcttgcttcagtccaaaacacgtgat
gtcatcaaatcagccctgagttttatcaaagttattctgttcatcatggatacaaaggtt
ctggctcaacagctacagctgctgatggaaagtattggcaatttgcgggatgatatgaga
cggcatttccgtgtaaaattaaaaaatatcttcacaaaattcatacgcaagtttggattc
gagatgattgacagcatgattccagaggagtaccatcgagtgcttgtcaacattcgtaaa
gcagaggcccggaataagaggcaacgagctctgaagcgagctgagagcggctcagaaaat
gaagatgaaactccaaaacaaaatggggacagtattgaagagattctggccgagtcagat
tctgatgaagaggttatggagaaagcagagaaagtgacaaagaagcaaattgtccagaag
agctctgcttggctgaaggaaggggaagctgatgaacccctcaattttctggaccagaaa
gtggcacagagggtgttagccactaaaccagagctgaagaagaaagcaagtattaaacac
gatttcccagtgttgtcagatggccgattggtaatcagtcaaggggcaaaggatgatcaa
ttaaaagactctgaagatgaagcaaatgaaatcttggaggaagttggtgtgaaaactaaa
gctgcacagaagcaaaaattcaaaactgctgatgatgatgaagagatgcagacagattca
tgctataaagctggaggttctggaattcacaggcagacactttcaaagagaaatagagag
tatggtgcagagtataaatcaacgaaaggacgaggggatgtgaaacagagagggaagctg
gatccttttgcctatgtcccacttaacaaatcacagctgaatcgaaggaaaaaggcgaag
atttgtggccaattcaagggcctggttagagctgcacggaaaggggcagaggccggtcgt
agattacaaaagaagaaacggagactgcaatga
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