Chiloscyllium punctatum (brownbanded bambooshark): 140463559
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Entry
140463559 CDS
T11285
Symbol
btaf1
Name
(RefSeq) TATA-binding protein-associated factor 172 isoform X1
KO
K15192
TATA-binding protein-associated factor [EC:5.6.2.-]
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cpun03021
]
140463559 (btaf1)
Transcription machinery [BR:
cpun03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
140463559 (btaf1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3535
SNF2-rel_dom
HEAT
Helicase_C
HEAT_EF3_N
TOR1L1_N
Vac14_Fab1_bd
HEAT_GCN1
HEAT_MROH2B_C
TPR_Trm732_C
HEAT_2
HEAT_GCN1_C
HEAT_EZ
ARM_TBCD_2nd
Cnd1
ARM_ECM29
Arm
Motif
Other DBs
NCBI-GeneID:
140463559
NCBI-ProteinID:
XP_072413819
LinkDB
All DBs
Position
38:43174981..43305738
Genome browser
AA seq
1872 aa
AA seq
DB search
MAVSRLDRLFILLDTGTTPVTRKAAAQQLGEVVKLHPHELHNLLSRVLTYLRSPNWDTRI
AAGQAVEAIVKNVSEWNPTPKIKQETVVQISTDEASLDRLSFDRFDISRLLKHGASLLGS
AGAEFEIQHEKSGEIDPKERIAHQRKLLQKKLGLDMGAALGMNTEELFNDEDLIYNPSPA
STVLKQPVGRTSGCLSSRNHALVQAADLIEAEFQPGMSSRQKNKAKRMAKLFAKQRSRDT
VEGNTNNEKCNDNVDGEPEEKRRKLTNVVIEQPATESKVLIDNILDSSSLFDESNEWPLE
SFCEELCNDLFNSSWEVRHGAGTGLREILKAHGKSGGKVGDSTLEEIEQQHQEWLEDLAI
RLLCVFALDRFGDFVSDEVVAPVRETCAQTLGVVLKYMNERGVHGTVAVLLRLLAQEQWE
VRHGGLLGIKYALAVRQDLIETLLPKVLPTIVDGLQDLDDDVRAVAAAALVPVVENLVQL
QASEVPFIVNTLWDALLELDDLTASTNSIMTLLSSLLTYSQIQQYSTQQSLTVLVPRVWP
FLRHTISSVRKAALETLFTLLSTRDQSCVMWLTPILQDVLRHIYQSCILESNQEILELIQ
KVWLELLNKAPIQYIVAAACPWMGAWLCLMMQPSHLPIDSNMLLEIKSKSKEKSCSKHRQ
GQAQTKEVRQEYIAGSDTINEDQATRDYVVTRTRLKAARLLGALCCSLCEPSVNFISQEV
KPAESLAQLLLFHLNSKSALQRIAVALVISEWATLRKDCTVVSRAVQPRLMAILSEHLYY
DEIAIPFTRMQNECKQFIASLAEANCDVGNSVNNSVFTIDQANELVTTIFKEVTSTAGLK
PNVIQQLESKRQQVQMTIAETNQEWQTLHLRVHMFSACAVVDLQQLPEKLNPVIKPLMEG
VKKEENVLVQNYAASCIAKLLQQCTSRCPCPNPKIVKNLCNSVCVDSTVTPSATSPVPMS
NSMENSKGPNSEKDGMHHTVNKTRGIITLYRHQQAAFALTSRRGPTPKALKGSSTDIPQG
SAGISLCEHDEEDFIVLQTQKPNLIQRRGAEYALTTIGKHFGAEMATTLPYLWDSMVGLL
RSHVDVQNFNGKVVLEKGDVVAQELVNSLQVLEITAAAMGSDIHAQLLQHLPHLCTCLRH
PYTAVRHMAARCVGVMSKIATMETMNIFLEKVLPWLGAIDDNTKQEGAIEALACIMEQLD
VDIIPYIVLLVVPVLGRMSDQTDSVRFMATQCFATLIRLMPLESGIPDPPHMSEELIKQK
ARERHFLEQLLDGTKLENYKIPVSIKAELRKYQQDGVNWLAFLNKYKLHGILCDDMGLGK
TLQSICILAGDHYLRVQEYTKTQAEDCSPLPSLVVCPPTLTGHWIDEVEKFCSNEILHPL
HYTGPPTERARLQHLVKKHNLVVASYDVVRNDIDFFKNIKWNYCILDEGHVIKNGKTKLS
KAVKQLTASYRLILSGTPIQNNVLELWSLFDFLMPGFLGTERQFAARYGKPILASRDARS
SSREQEAGVLAMEALHRQVLPFLLRRMKEDVLQDLPPKIIQDYYCNLSTLQVQLYEDFAK
SRAKCDVEETISAGALSEENEKPKLKATGHVFQALQYLRKLCNHPALVLTSQHPEFQHII
EQLAAQNSSLHDIQHAPKLSALKQLLLDCGLGNSGASENGTESVVAQHRVLIFCQLKSML
DIVEHDLLKPQMPSITYLRLDGSVPAGQRHSIVARFNNDPSIDVLLLTTHVGGLGLNLTG
ADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKMSIANT
VISQENASFQSMGTDQLLDLFTLDKDGQEDKGSSNSSGKPTVKAILENLGELWDQQQYDT
EYNLDNFMHSLK
NT seq
5619 nt
NT seq
+upstream
nt +downstream
nt
atggcagtatcgaggcttgatcgtctatttattttactggatactggaacaacaccagta
acgagaaaagcagcagctcaacagttgggcgaagtagttaaacttcatcctcatgaactg
cacaacctgttatccagagtcttaacatatttacgcagccctaactgggacactcgcatt
gcagctggccaagcagtagaagctattgtgaagaatgtatctgaatggaaccctactcca
aagataaaacaagagactgttgtacaaatttcaacagatgaagcatctttggatcgtttg
agctttgatagatttgatatatcacggcttttgaaacatggagcatctcttcttggctct
gctggtgcagagtttgagatccaacatgagaaatcaggagaaatagaccccaaggagaga
atagctcatcagagaaaactgttgcaaaagaagttgggtctcgacatgggagcagctcta
ggaatgaacactgaagagctctttaatgatgaagatctaatttataatccttctccagct
tcaacagtactgaagcaacctgtaggtagaacctcgggttgtttgtcttcaaggaatcat
gcacttgtccaggctgctgatctgatcgaagctgaatttcagcctggtatgagcagtcgg
cagaagaataaagcaaagaggatggctaagctgtttgctaagcaacgatccagagacacc
gtggaaggaaataccaacaatgaaaaatgcaatgataatgttgatggggagccagaggag
aaacgtcgcaaacttaccaatgttgtaattgagcaaccagcaactgaatcgaaggtttta
attgataatatacttgacagttcttctttatttgatgagtcaaatgaatggccattagaa
agcttctgtgaagaactttgcaacgacctttttaactcttcatgggaggttcggcatggt
gcaggaactgggctaagggagatattgaaggctcatggaaaaagtggcggtaaagttgga
gacagcactttagaagagattgaacaacaacaccaggaatggctagaggatttggctatt
cgtctactttgtgtgtttgcactggacagatttggagattttgtttctgatgaagttgtg
gcacctgtacgcgaaacttgtgctcaaacacttggagttgtgttgaagtacatgaatgag
aggggggtgcatggaactgtagctgttttactaagattgctggcacaggaacagtgggaa
gtgagacatggtggacttctaggaataaaatacgctttggcagttcggcaggacttgatt
gagacattgttaccaaaagtccttcctactatagttgatggtttgcaagacttggatgat
gacgtccgtgcagtagcagcagctgcacttgtaccagtcgtggaaaatcttgtacaactt
caagcatctgaggtgccttttattgtcaatactttatgggatgcacttttggaattggat
gatcttacagcttctactaacagcatcatgaccctgttgtcatcactattgacatatagt
caaattcaacagtacagtacccagcaatcacttacagttttggttcctcgggtttggcca
tttttacgtcacactatttcttctgttcggaaagcagctttggaaactttattcactctt
ctatctacacgagatcaaagctgtgtaatgtggttgacaccaattctacaagatgtattg
agacatatataccaatcgtgtattttggaaagcaatcaagaaattttggaacttattcaa
aaggtgtggttggagctattgaataaagcccctattcagtacattgttgctgctgcttgc
ccttggatgggagcttggttatgtttaatgatgcaaccttctcatttaccaattgattca
aatatgctactggagattaagtccaaatcaaaggaaaaatcttgcagtaaacatcgacaa
ggtcaagctcaaaccaaagaggtgaggcaagaatatattgctggctcagacaccattaat
gaggatcaagctaccagagattatgttgtaactaggacacgcctaaaggcagctagattg
ctcggagccctctgctgttccttgtgtgagccaagtgtgaacttcatcagccaagaagtg
aaaccagctgagtcactagctcaattattattatttcatttaaattctaaatctgcgctg
cagagaattgctgttgcattagtaatttctgaatgggctacactgcgaaaggattgtact
gttgtatcacgtgcagtacagccacgactgatggctattttgtcagagcatctttattat
gatgagatagctattccttttacccgcatgcagaatgaatgcaagcagtttattgcatca
ctggctgaagctaattgtgatgttgggaacagcgtgaataatagcgtatttactatagat
caagcaaacgaactggtcacaacgattttcaaagaagtgacatcaacagctggtttaaag
cccaatgtgatccaacagttggagagtaagcggcagcaggtccaaatgactatagcagag
acaaatcaagaatggcaaactcttcatctgagggttcacatgttctctgcttgtgcagtt
gttgatttgcagcaacttccagaaaaactgaatcctgtcataaaacccttaatggaagga
gtgaaaaaagaggaaaatgtacttgtgcagaactatgcagcatcttgtattgctaagttg
ctccaacaatgtacatctagatgtccttgtcccaaccccaaaattgtgaaaaatctttgt
aactccgtttgtgtggactccacagtcactccttctgcaacttctccagtgcctatgtct
aacagtatggaaaattcgaaaggaccaaattctgaaaaagatggaatgcatcacactgta
aataagactcggggaatcatcacgctttacaggcatcagcaagctgcttttgccttaacc
agtagacggggtccaacacctaaagcactcaagggctcatctacagacattcctcaaggg
agtgctgggatcagtttgtgtgagcatgatgaagaggatttcattgttttgcagacccag
aagccaaacttaattcaaagaagaggagctgaatatgcacttacaaccataggaaaacac
tttggcgctgaaatggcgacaaccctgccttatttatgggattctatggttggactactg
cgaagtcatgttgatgtgcagaattttaatggaaaggtagtcctcgagaaaggagatgtt
gttgctcaggaattagtaaactcgttacaggtgctagaaattacagcagcagcaatgggt
tctgatatccatgctcagctattgcaacatcttccacatctttgcacttgtttgcgacac
ccatatactgcagtaaggcacatggctgctaggtgtgtgggtgtcatgagcaaaatagct
acaatggaaacaatgaacatttttctggagaaggttctcccttggctaggagcaatcgat
gataatacaaaacaagaaggagcaattgaagcgttggcctgtataatggagcaacttgat
gtagatatcatcccatatatagtgctgctggtggtacctgtgctgggaaggatgagtgac
caaacagatagtgtgcggttcatggctacacaatgctttgcaacattgattaggttaatg
ccactcgagtctggcattccagatcctcctcatatgtcagaagaactgattaaacagaaa
gcacgagagcgccactttttggaacagttattagatgggacgaaattagaaaattataaa
attcctgtttctatcaaggctgaacttagaaagtatcagcaggatggtgtaaattggttg
gcatttctgaataaatacaagctccatggcattctttgtgatgatatgggactgggaaaa
actttgcaatcaatatgcattcttgcaggagatcattacctcagggttcaggaatacaca
aaaactcaggcagaagactgttcacctttaccttctttagtagtatgtcctccaacacta
acaggccactggattgatgaagtagagaaattctgttctaacgaaatattgcatccattg
cactatacaggacctcccactgagagggctagattgcagcaccttgtgaaaaaacacaat
cttgttgtggcatcatatgatgttgttcgaaatgacattgactttttcaagaatattaag
tggaactattgtattcttgatgaaggtcatgtcatcaaaaatggcaagacaaaattatca
aaggcagttaaacaactaactgcaagctacaggttgattctatctggaaccccaatacag
aacaatgtgctggaattgtggtcactatttgatttcctaatgccaggatttttgggtacc
gagcggcaatttgcagctcgttatggaaaaccgatattagctagtagagatgcgagaagt
tcttcacgggagcaggaagcaggtgtacttgcaatggaagcattacatcggcaagtactt
ccattcctgctacgcaggatgaaggaggatgttcttcaagatcttccacctaagattatt
caagattattactgcaatctcagtactttacaggtgcaactgtacgaggattttgccaaa
tctcgtgctaagtgtgatgttgaagaaacaatttctgcaggtgcactctcagaagaaaat
gagaaaccgaaattgaaggcgactggacatgtatttcaagcgttgcagtacttgaggaaa
ctatgcaatcatccagcactggtgctgacttcacaacatccagaatttcaacatattata
gagcagcttgctgcccagaattcatctcttcatgatattcagcatgctcctaaactctct
gctttaaaacagttgctgcttgactgtggacttggcaatagtggagcctccgaaaatggt
actgagtctgttgtagctcagcatagagttctcattttctgtcaactgaagagcatgttg
gacattgtagaacatgatttgcttaaacctcagatgccaagtattacttacttgagatta
gatggcagtgtgcctgcaggccagcgacattccattgtggcaaggtttaataatgaccca
tctatagacgtcttgctgttaaccacccatgttggtggcttaggtcttaatctcactgga
gcagatactgtagtatttgtggaacatgattggaacccaatgcgtgatctgcaagccatg
gatcgagctcatcgtattggacagaaacgtgttgttaatgtttatagattaataacaaga
ggaacactggaagagaagatcatgggattacaaaagtttaaaatgagcattgcaaatact
gtcattagccaagaaaatgcaagtttccagagcatggggacagatcagcttctcgattta
tttactcttgacaaggacggccaagaagataagggatcttctaattccagtgggaagccg
actgtaaaagcaatcttggaaaaccttggagaactttgggatcagcaacaatatgacaca
gaatataacttggataattttatgcattcgctgaaataa
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