Chiloscyllium punctatum (brownbanded bambooshark): 140464185
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Entry
140464185 CDS
T11285
Symbol
trim25
Name
(RefSeq) E3 ubiquitin/ISG15 ligase TRIM25 isoform X1
KO
K10652
tripartite motif-containing protein 25 [EC:
2.3.2.27
]
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun04622
RIG-I-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09150 Organismal Systems
09151 Immune system
04622 RIG-I-like receptor signaling pathway
140464185 (trim25)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpun04121
]
140464185 (trim25)
Enzymes [BR:
cpun01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
140464185 (trim25)
Ubiquitin system [BR:
cpun04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
140464185 (trim25)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPRY
PRY
zf-RING_UBOX
zf-C3HC4_4
zf-C3HC4
zf-C3HC4_2
zf-RING_2
RING_XB3-XBAT31
zf-C3HC4_3
zf-B_box
zf-RING_5
ANCHR-like_BBOX
zf-RING_6
U-box
zf-RING_10
IBR_1
zf-Nse
zf-RING_4
Baculo_IE-1
IFT52_GIFT
SidE_PDE
Motif
Other DBs
NCBI-GeneID:
140464185
NCBI-ProteinID:
XP_072415131
LinkDB
All DBs
Position
39:complement(69310813..69349124)
Genome browser
AA seq
692 aa
AA seq
DB search
MMMMMAAGAGDTERLEAELTCAICLDLFREPVTAPCGHNFCRSCLAQFWAEDRRYLLGFT
CPQCRHHFVERPELQPNRVLCAVVEEFERGRSQTLPAEAPAEPPAAVVCDACPPGAGARA
PAVRSCLTCLASFCSEHLVPHQQSAAFRNHNLQPPLADLAERLCPQHGNLLEFYCRPHRS
CICAVCILEHRGCETNRMEEAFKQQEADLKTQRKNLQYQIIQLQHHLELVRYKKQHLTDS
SMKQKLSLSSEFNEMKTLIEEEEKIAVKLIEEEENKAASQVADALDQINTQLDKLKEYKE
QLDSLLSHTGSMHFWKSIGELPAISLKACTPPNPAEVNVRKVELVQKVVSALKQVLVREL
KAPLQQRINQVDRAEKTKLKALANPDQRMDTNSPLDPLEPLSANVCKLLQTANPPEGKQA
RKKKTMAKASNSPDQEPSVGQPNEESSPLDPLEPPSANVCKLLQTANPPEGKQARKKTTK
SKASNSPKPGSGAEQSDEYKKPFNVATLPMTRCKLLQYKSKITFDHRTAHKKLLVRDDYT
HLSVANQLQPYPDHPGRFVNCVQVLGLQSFSSGCHYWEVNNEGSNFWAIGLAYVSLDRQG
SRSRLGRSPLSWCLESFGQKLSVWHKGQEAILHVSQPRIIGVHLDYNQGIVAFYSVTDSM
MRLFYYEVDFQGRVFPAFWLGNIGTTLSLVQL
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgatgatggcggcgggagccggggacaccgagcgcctggaggccgagctgacc
tgcgccatttgtttggacctgttccgggagccggtgacggccccgtgcggccacaatttc
tgccggagctgcctggctcagttctgggccgaggaccggcgatacctcctgggcttcacc
tgcccgcagtgtcgccaccacttcgtggagcggcccgagctgcagcccaaccgtgtcctg
tgcgccgtggtggaggagttcgagcggggccggagccagacccttccggccgaggccccg
gccgaacccccggccgccgtggtctgtgatgcctgtcctcccggggccggggcccgggcg
ccggcggtccgcagctgcctgacctgcctggcctccttctgcagcgagcaccttgtcccg
caccaacagagcgcggcctttcggaaccacaacctccagcccccgctcgctgacctggcc
gagcgcctgtgcccacaacacggcaacctgctcgagttctactgccgcccccaccgcagc
tgcatctgcgccgtctgcatcctggagcaccgcggctgtgagaccaacaggatggaggag
gccttcaagcagcaggaggcagacctgaagacccagcggaagaatctgcagtatcaaatc
atccaattacagcatcacctggagcttgtgcggtataagaaacaacacctcacggattcc
tccatgaagcagaaattgtcactttccagtgaattcaatgagatgaaaactctaattgag
gaagaggagaagattgcagttaaactaatcgaggaagaggagaacaaagcagcgagccaa
gttgccgatgcacttgatcagatcaatacccagctcgataaactgaaggaatacaaggag
cagcttgattcgctgctgtcccacactgggagcatgcacttctggaagagcattggtgaa
cttcctgcaatctcgttgaaagcgtgcacaccccccaatcctgctgaagtgaatgtcagg
aaagtggagcttgttcaaaaagtggtttctgcattgaagcaggttctggttcgggagttg
aaagctccactgcagcagagaatcaatcaagtggatcgggccgagaaaacaaagcttaaa
gcattggccaatccagaccagaggatggacacaaattcccctttggatccattggagcca
ctgtctgcaaatgtgtgcaaattacttcaaacagctaaccctcctgagggcaagcaagct
agaaagaagaaaaccatggctaaagcatcaaacagtccagaccaagagccatctgtaggc
cagccaaatgaagaaagttcccctttggatccattggagccaccatctgcaaatgtgtgc
aaattacttcaaacagctaaccctcctgagggcaagcaagctagaaagaagaccaccaag
agtaaagcatcaaacagtccaaagcctggttcaggtgccgagcagtcagatgagtacaaa
aaaccgtttaatgttgctacgttaccaatgactcgatgcaagttgctgcagtataaatcg
aaaatcacctttgatcaccggactgcgcacaagaagctgctcgtgcgtgatgactacacc
cacctgagtgtggccaaccagttacagccctatcctgaccatcctgggaggtttgttaac
tgtgtgcaggtcctcgggctgcagagtttctcaagcggctgccattactgggaagtgaac
aatgagggcagcaatttctgggcaattgggcttgcttatgtcagcctggataggcaaggg
agtaggagtcgtctaggaaggagcccactgagctggtgcttggagagctttggccagaag
ctgtctgtttggcacaaaggccaggaagctatcctgcatgtgtctcagcccagaatcata
ggagtccatctcgactataaccaagggattgtggccttttattcagtcactgactccatg
atgaggctgttttattatgaagtagattttcaaggccgggtttttcctgctttctggctg
ggcaacattggcaccaccctctccctggttcagttgtaa
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