Chiloscyllium punctatum (brownbanded bambooshark): 140464322
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Entry
140464322 CDS
T11285
Symbol
shmt1
Name
(RefSeq) serine hydroxymethyltransferase, cytosolic
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun00260
Glycine, serine and threonine metabolism
cpun00630
Glyoxylate and dicarboxylate metabolism
cpun00670
One carbon pool by folate
cpun01100
Metabolic pathways
cpun01200
Carbon metabolism
cpun01230
Biosynthesis of amino acids
cpun01240
Biosynthesis of cofactors
cpun04981
Folate transport and metabolism
Module
cpun_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
140464322 (shmt1)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
140464322 (shmt1)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
140464322 (shmt1)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
140464322 (shmt1)
Enzymes [BR:
cpun01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
140464322 (shmt1)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Motif
Other DBs
NCBI-GeneID:
140464322
NCBI-ProteinID:
XP_072415360
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Position
40:6894375..6933881
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AA seq
481 aa
AA seq
DB search
MANIIGNTSDRWETHTAMLVEPLSTNDPEVYDIIKKEKSRQRLGLELIASENFASRAVLE
ALGSCMNNKYSEGYPGQRYYGGTEFVDELERLCQKRALDLYNLDPEKWGVNVQPYSGSPA
NFAVYTALVEPHGRIMGLDLPDGGHLTHGFMTEKKKISATSIFFESMPYKVNPETGYIDY
DRLADNAQLFHPKLIIAGVSCYSRNLDYARMRQIADDNGAYLMSDMAHISGLVAAGVVPS
PFEYSDVVSTTTHKTLRGCRSGMIFYRKGVRSTDPKTGKEIMYNLESLINQAVFPGLQGG
PHNHAIAGVAVALKQAMTAEFKLYQKQIVANCKALSSALVNLGYKIVTGGSDNHLILVDL
RNQGTDGGRAEKVLEKCAIACNKNTCPGDKSALRPSGLRLGTPALTSRGFQEEHFRTVAA
FIHRGIQITLEIQRDIGAKASLKEFKERMMTDKDYQSKIRQLKEEVEMFASKFPIPGLAD
L
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atggcaaatatcattggtaacacctcagacaggtgggaaactcatactgcaatgctggtg
gaacccctcagtaccaatgatccagaggtatatgacatcattaagaaggagaagagtcgt
cagagacttggcttggagctcattgcctctgagaactttgcaagccgagctgtgttggag
gctctgggctcgtgcatgaataacaaatattctgaggggtatcctggacagaggtattat
ggtggcactgaatttgtagatgagttggaacggctgtgccagaaacgagcattggatcta
tacaaccttgacccagagaaatggggagtcaatgtccagccatattcaggctctccagcg
aactttgctgtttacacagctctcgtggagccacatgggagaatcatgggattggacctt
cctgatggtggccacttgacccatggcttcatgactgaaaagaagaaaatttctgccaca
tccatcttctttgagtcaatgccatacaaggtaaaccctgaaactggttatattgactat
gacaggttggcagataacgcccaactcttccacccaaagctcatcatcgcaggggtgagc
tgttactcccgtaatctggattacgccaggatgcgacagattgcggatgacaatggtgcc
tacctgatgtcagacatggcacacatcagtggcttggtggcagccggggtggtgccctct
ccatttgaatacagtgacgtggtttccacaacaacacacaagaccctccgtggctgcagg
tctgggatgatcttctacagaaaaggagttcgcagcactgatccgaagacaggaaaggag
atcatgtacaacttggaaagtctgatcaatcaggcagttttcccggggctgcaaggtggg
ccccacaaccatgccatcgcaggagttgctgttgcactcaaacaggcgatgactgcagaa
ttcaagctttaccagaaacagattgtggcaaactgcaaggctctttcatcagcattggtg
aacctgggatacaagattgttactggtggctcagataatcatctgatcctggtggatcta
cgcaaccaaggcacagatgggggcagagctgagaaggttctggaaaagtgcgccattgct
tgcaacaagaacacctgtccaggtgacaaaagtgccttacgtcccagtggccttcgcctg
ggaacaccagctctcacctctcgagggttccaggaagagcatttccgcacagtagcagct
ttcattcacagagggatccagataacactggagattcagagagacattggtgcaaaggca
tcactcaaagaattcaaagagaggatgatgactgacaaggactaccagagcaagatcaga
caactgaaggaggaagtggagatgtttgcgtccaaattcccaattcctgggttggctgat
ctttaa
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