Chiloscyllium punctatum (brownbanded bambooshark): 140464564
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Entry
140464564 CDS
T11285
Symbol
usp42
Name
(RefSeq) uncharacterized protein usp42 isoform X1
KO
K11855
ubiquitin carboxyl-terminal hydrolase 36/42 [EC:
3.4.19.12
]
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
cpun01002
]
140464564 (usp42)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
cpun04121
]
140464564 (usp42)
Enzymes [BR:
cpun01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.19 Omega peptidases
3.4.19.12 ubiquitinyl hydrolase 1
140464564 (usp42)
Peptidases and inhibitors [BR:
cpun01002
]
Cysteine peptidases
Family C19: ubiquitin-specific protease family
140464564 (usp42)
Ubiquitin system [BR:
cpun04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
UBP/USP
140464564 (usp42)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
UCH_1
Motif
Other DBs
NCBI-GeneID:
140464564
NCBI-ProteinID:
XP_072415897
LinkDB
All DBs
Position
40:complement(46075246..46180463)
Genome browser
AA seq
1423 aa
AA seq
DB search
MTIVDKVTEASNTAACKNQTCSSVAPFSEIVKKKNMESGATSWGATSPITEVPKSKILGP
MPGAALFTNALQEKSKQLQKDQSVLGSGDGIAPPQKILFPAEKISLKWQQLHKIGAGLQN
LGNTCFLNSALQCLTYTPPLANYMLSREHSRTCNEQGFCMMCMMQNHITQVFSSSGNVIK
PMSVINDLRRIAKHFRFGNQEDAHEFLRYTVDALQKACLNGSNKLDRQTQATTMIYQIFG
GYLRSRVKCLNCKGVSDTYDPYLDIALEIKTAPNITKALEQFVKPEQLDGENAYKCTKCK
KMVPASKRFTIHRASNVLTLSLKRFANFTGGKITKEVRYSEYLDVRPYMSQSNGEPVIYV
LYAVLVHSGFSCHAGHYYCYIKASNGQWYQMNDSVVSSSDIRSVLNQQAYVLFYIRSHDT
KNSSEHSNHPGQSSPRPPVNQRLATSQTVSGFIGPQLPPHRTKNSNHLANGNCSQKEVPG
SAVPSTSGIRTISTSPGPSQNRSLPRPSVIPESSKRQKLSFSIQPSKQGTRQAPTQTNLH
SSPLENLYKTPSSVSHANVSPSTSGTSATGSPPSAPTALAIVAAQPVASNTASSHLMVNG
QSKGSSSSLVPYNEESSEDSDEEPKSLIKENGYVKAINGTLNGTRHCTHLKVNSSSIATS
DSCHSENLPERVISKTDVHREVGDRDKNHQICESTVSQLQSLTCSANGLSTTKESSADKI
STVPLIPNTEKITQISTSSIKQEKASEEVRANQNKLLMSSKASSAINHSGGGGDADTVHT
YMADKQANPLVSPLEEATDGPSTSSTVNPIKSNSELQKNIAECCHVNSSSHDQSPVHKVQ
AIPEITETQEKLRPNLVKEEMQTGDHKTNVHCFENKQSSQDLGNKVPELQNHSNNPQSNN
NQESILENESQSCKEHSYRGRTNQDDLHCIKKPQSGRGTNNEVKNWVIEESRQPVNKNQY
HENEPSQDIQQKPEQQPTNFVKSPIGEHLNENKNSISEQDNTYKDVCLMSPRKNIAGPEE
KRVQVKENSTFVDVKSQCRERTGAEKNRPLQKDSYKGESNYRHRSREHKDRRMHQNAREF
EKSASCNYRNCSHKQDYYQDGRIDKYRRNNECPADRQNYSNSKTSSLLAYYPSQDRFYRE
KYNSGSNGRTWSSQFEYNGLEHKYEHKRKRNNSVNDEGDPERKCKKLHRSSEERRMKKHK
KSKKKKTSKDKHRSRDHRQQPFGASEASCDIDERKHRKKKKKKKKKRHHSDKDSHYQKEH
YHSRKHHSMKSPHASNKWGRFCESTRGTYSEDKMMHRNKETGGDQIPQKEKLAHLDTKLD
GSHVHSKEELLNEHNGSLNRHLLDYVGSGSLSDWSKQRLENGSDSHKPYSKFDKEHLHEK
HYSHGYKEFGSADNRNNLTSVSSFRETTRWKTGEKRSEEQKAH
NT seq
4272 nt
NT seq
+upstream
nt +downstream
nt
atgaccatagttgacaaagtgacagaggcctcgaacactgcagcttgcaagaaccaaacc
tgcagctctgtggcacctttctctgaaattgttaaaaagaagaacatggagtcaggggca
acaagttggggtgctacatcccctattacagaggtaccaaaaagcaaaatcttaggacct
atgcctggagctgctttgttcaccaatgcactgcaagagaagtcaaagcaactacaaaaa
gatcaaagtgtacttggcagtggtgatggaatagcgcctccacagaaaatactgttccct
gcagaaaaaatctccctgaaatggcaacaactgcacaaaataggagctggcctccaaaat
ctgggcaacacctgcttcttaaactctgcactgcagtgtttgacttatacgccacctctt
gcaaactacatgctttcccgggagcattctagaacatgtaatgaacaaggattttgtatg
atgtgtatgatgcagaatcatattacccaggtcttttccagttctggaaatgtcatcaag
cctatgtctgtcattaatgacctccgacgaattgcaaaacattttcgatttggaaatcag
gaagatgcacatgaattcttacgttacactgttgacgctctccagaaagcatgcctaaac
ggaagtaacaaattggatagacaaactcaggccaccacaatgatatatcaaatttttgga
ggttacttgcgatcgagagtaaaatgcttaaactgcaaaggtgtttctgacacatacgac
ccttacttggatattgctctggaaataaagactgcaccaaacatcacaaaagctctagaa
caatttgtaaagccagaacaactggatggtgaaaacgcctacaaatgcacgaagtgtaag
aaaatggtgccagcctcgaaaagattcacaattcatcgagcttcgaatgtgctgacactt
tctctgaagcgctttgcaaactttacaggtggaaagatcacaaaggaagtgaggtactct
gaatatttggatgttcgaccctatatgtcacagtctaatggagagccagttatctatgta
ttatatgcagtattggtacattcaggattcagctgccatgctggacattactactgttat
atcaaggctagcaatggacagtggtaccagatgaatgactctgtcgtatcttcaagtgac
atcagatcagtgctcaaccaacaagcctatgtgctcttttacatcagatctcatgataca
aaaaatagctcagaacattctaatcacccaggccagtcatctccaaggccacctgtaaac
caacgattggctaccagtcaaactgtatctggttttattggaccacagctccctccacac
aggaccaagaactcaaaccacttagcaaatggaaactgttctcaaaaggaagttcctggc
agtgcagtacccagcacaagtggaatcaggaccatttctacttcccctggaccctctcag
aatcggtcattgcccagaccaagtgtgatacctgaatcttccaaaaggcaaaaactttcc
ttcagtatacagccttccaagcaaggaacaagacaagctccgactcagaccaacctgcat
tctagtccattggagaatttatacaaaactccttccagtgtttcccatgctaatgtgtct
ccatctacctcaggaacttcagccaccggatctccgccctctgctccaactgctttagcc
attgtagctgctcagccagttgcatccaacactgcctcttctcacttaatggtcaatggt
cagtccaaaggatcttccagttctttggtcccttataatgaggaatcttcagaggactct
gatgaggaacctaagagcttgataaaagaaaatggttatgtgaaagctataaatggtaca
cttaatggaactagacactgtacacatctcaaagtaaactcttcatctatagccactagt
gacagttgccattctgagaatctgcctgagagagttataagtaaaactgatgtgcacagg
gaagtgggtgatcgtgacaagaatcatcagatctgcgaatccactgtttctcagctgcag
tccctgacttgttctgcaaatggattatctactacaaaggaatcatctgcagataaaatt
agcactgttcctctaattccaaacacggagaagataacacagatctccacaagcagtata
aagcaggagaaagcttcagaagaagtcagggcaaatcaaaacaaattgctaatgtcttct
aaagccagttctgcaataaatcatagtgggggtggtggtgatgcagacacagtacataca
tacatggctgacaagcaagcaaatccactggtctctccactagaagaagccactgatggg
ccatccacatcatccacagtcaatcctattaaaagcaacagtgaacttcagaaaaatatt
gctgaatgttgtcatgttaacagtagttcccatgaccaaagtcctgtccacaaagtacaa
gcaattccagaaattactgaaacccaagaaaaattaaggcctaatctggtcaaagaggag
atgcagactggtgaccataagaccaatgttcattgttttgaaaataagcaatcgagtcaa
gatctaggcaataaggtgccagaattgcaaaatcacagtaataaccctcaatctaataac
aaccaggaaagtattttggaaaatgaaagtcaatcttgtaaggaacactcctataggggg
aggactaatcaggatgatttacattgcatcaaaaaacctcagtctggtaggggaacaaat
aacgaagtcaagaactgggtaattgaggaaagtcgtcaacctgtcaacaaaaatcaatat
cacgaaaacgaaccaagtcaagacatacagcagaaaccagagcagcaaccaactaatttt
gtgaaatctcccattggggaacatttgaatgaaaataagaatagcatttcagaacaggat
aatacttacaaggacgtctgtcttatgtcaccaaggaaaaatatagctggtccagaggaa
aagcgggttcaggtgaaagaaaactcaactttcgtcgatgtaaaatctcaatgtagagaa
aggactggtgcagaaaagaatagacctttacaaaaggatagttataagggtgagtctaat
tatagacacagatctagggaacacaaagacagaagaatgcaccaaaatgcaagggagttt
gaaaaatcagcaagttgtaattacaggaattgttcccacaagcaagattattatcaagac
ggtcgcattgataaatatagaagaaataatgagtgtccagctgataggcaaaactacagt
aattcaaagacaagctcattactagcttattatccttctcaagataggttttacagagag
aaatataattctggctcaaatggaaggacttggagcagtcagtttgaatataatggactg
gaacacaaatatgagcataaaaggaaacgtaataacagtgtgaatgatgaaggtgatcct
gaaaggaaatgtaaaaaactgcatcgatcatctgaggagaggagaatgaaaaagcataaa
aaatcaaagaaaaaaaagacatcaaaagacaaacacagaagtagagaccacaggcaacaa
ccttttggtgcatctgaggcaagctgtgacattgatgaaagaaagcacaggaaaaagaag
aagaagaaaaaaaagaaacggcatcacagtgacaaagacagccattatcagaaagagcat
tatcattccaggaaacatcatagcatgaaatcacctcatgccagtaacaaatggggaagg
ttctgtgagtcaactcgaggtacctattctgaagataagatgatgcatagaaataaagaa
acaggtggtgatcaaattccacagaaagaaaaattggcacatttggacactaagctagat
ggctcccatgtccacagcaaagaggaattgttgaatgagcataatggaagcttaaataga
catcttttggactatgttggatcaggatctctttctgactggtccaagcagagattggaa
aatggaagtgattcacataaaccctattcaaaatttgataaagaacacttacacgaaaag
cactattcacatggctacaaagaatttggttcagcggacaataggaacaatctgactagt
gttagttcctttcgggagactacacgatggaagactggtgaaaagagatctgaagagcag
aaagcccactaa
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