Chiloscyllium punctatum (brownbanded bambooshark): 140464655
Help
Entry
140464655 CDS
T11285
Symbol
ciita
Name
(RefSeq) MHC class II transactivator
KO
K08060
MHC class II transactivator [EC:
2.7.11.1
]
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
cpun01001
]
140464655 (ciita)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
cpun04054
]
140464655 (ciita)
Enzymes [BR:
cpun01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
140464655 (ciita)
Protein kinases [BR:
cpun01001
]
Serine/threonine kinases: Other
TAF1 family
140464655 (ciita)
Pattern recognition receptors [BR:
cpun04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
140464655 (ciita)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
LRR_6
NLRC4_HD2
LRR_4
NB-ARC
LRR_14
nSTAND_NTPase5
AAA_16
AAA
nSTAND6
nSTAND3
AAA_22
CARD
RNA_helicase
Motif
Other DBs
NCBI-GeneID:
140464655
NCBI-ProteinID:
XP_072416118
LinkDB
All DBs
Position
40:59134349..59260684
Genome browser
AA seq
1338 aa
AA seq
DB search
MIHSRKDLLGLINVLSQAPPSKFQDLLSDLLEKGLLTKDGYRHYNQCEPEDLPRTILVSV
LGKEESYCQAFLSLLCTHFPWICGVFQQVSNNKDQTWRNGQPGNMRSQSCTIQLPSLKDH
SYLALLQEEHCSAQMAMSSSCGQNGEVTCGTGLDSNHCDLYKEILEDFCELDRTYEPCDV
GIEGILKYLQDPRPLNAIELEQYFDDEILLETQEVTVKSTPLKGTASSVCGMHFSDTKVT
CQSPVSPSEVNTYSRKRSAIGDCPSASGIPSQDSTSFSDAPRAKCLRGDEESLPPSPEHS
NNSADILSPTIYLSDINHLKELKNHVAQIGSDASLNSVKGDESITNSPAVSSAGFQFVPS
YAVPQQVVKVPVNGAVHSRASTCFLVLNESLATLEITTPLPTSPLHSPRSSTPESTPKNV
PVDPWSALALIVNTDSQTASPEVSPTGPGFSSPQSVNVQSSPESVTNAQPVDSPTSPVSL
DSERLDLETESSGEESSGPSSPTIKSYRKTRGVEACTEMVKEYLRDMSQHSYICHEHDEM
LLEDIYVDVTMIEVQAENKSAKNASKCLDKECKIYDIAERERVAVNLSNLLNVSGKRPKE
TKIVSLLGRAGIGKSVLVQKICHDWVNGSFRQFEFVFWFKCRMLNFAKQYTLKDLLFQPF
LPTLKNTDEVFQYLCHNSRKVLLILDDFEDLHHHDGLLQSSVCGSAERPHTVKQLLAGLL
QRKLLKGCTMLITARPKETFNQYLGRVDKIVEVLGFHPLHVQEFLHRYFEDSSLAAEAMV
CLQEQQYLLSICSTPLLCRFICFVLKTKRRTGDGRLVLPSTLTRLFLNIFHILLQGKTQH
IMVLHRQNILELSKHAFAGVQCHYSVCEASKAVEMSNFALKHGLLRPFLMNSEGKGQECG
KTFSHSCLQNFLAGLYLFFSEDVKCKGLMKLISLEHRKRKSQEDWLDVARRFLVGLAFQE
GNEFLHGFSQHPKANVKGKKQKSLQKYLAELDVSALSTSKLVELCHCVYETQSAELTARV
AAKLDQRLSFRGTRLTPADIFVLLYMMRSSPNNFAVDLRETNIDLPGIQQFVELRNVTSF
RVSVCDVIKLWEHLEQNGFHELLRQSLLKFSVNPFEIKSLKDIDDLDLLVQIHKDRRFLS
STHDTTGSELYELPAVRTLQVLEFALGPVDGPQGFQKLTKILPALAFLKYLDLEGPSSQK
VKMSENKIGDEGAERLAKVLSNLTLLEKLTLSRNQIADRGAQELARSLPNLKFLKTLSLY
DNIIGDKGAEKLAEILPIMKSLKVLDVKFNKITDTGAQRLTQSLKDCPHIETIWLWSPTI
THWMSEHIQQIDVRINLQ
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atgattcactccagaaaagacctacttggcttgattaatgtactttcgcaagcacctcct
tcaaaattccaagatttactgagtgacttgttggaaaagggcctattaacgaaggatggc
tatcggcattacaaccaatgtgagcccgaggacttgccgcggaccatccttgtatctgtt
cttggcaaagaggagagttactgtcaagcatttctctcccttctctgcacccattttccg
tggatttgtggggtgtttcaacaagtttccaacaacaaggatcaaacatggagaaatgga
caaccaggcaacatgagaagccaaagctgcaccatacagttgccatcactaaaagaccac
agctacttggctctgcttcaggaggaacattgttcagcacagatggctatgtcaagcagc
tgcggtcagaatggagaagtaacttgtggaacaggtcttgacagtaatcattgcgacctt
tacaaagagattttagaggacttttgtgaactggatagaacttatgaaccatgcgacgtt
ggcattgaaggaattttgaagtatttgcaggacccacggccactaaatgcaatagaactt
gaacaatattttgatgatgaaatattactggaaacacaggaagtgacagtcaagagcact
ccactcaagggtactgcctcatcagtctgtggcatgcatttttcagacaccaaagtcacc
tgccagagtcccgtttctccatctgaggtgaacacatacagcagaaaaagatcggccatt
ggagattgtccaagtgcttcgggaattccatctcaggattctactagtttctcggatgct
ccaagagccaagtgtttaagaggagatgaagagagtctacctccttctccagaacattcc
aacaattcagcggacatcttgtctccaaccatctacctttcggacatcaaccatctgaag
gaactgaaaaaccatgttgcccagattggatcagacgcttccttaaactcagtcaaaggc
gatgaatcgatcacgaacagtccagcagtcagttctgctggtttccagtttgtcccatca
tatgcagtaccacagcaagtcgtcaaggtgcctgtcaatggagctgtacattcaagagcc
tccacctgctttttagttctaaatgagagcttggcaactcttgagattacaacaccacta
ccgacatcgcctctgcattcaccacggagctcaacaccggaatcaactcccaagaatgtt
ccagtggacccatggagtgctttagctcttattgtgaacacagactctcagactgccagt
cctgaagttagtccaactggtccaggcttctccagtcctcaatctgtcaatgttcagagc
tcaccagagtccgtgaccaatgctcagcctgtggatagtccaacctctccagtctctttg
gacagtgagagactagatcttgaaacagagtcatctggtgaagaatcatcaggaccatca
agtccaacaatcaagtcgtacagaaaaacaagaggtgtagaagcttgtacagaaatggtg
aaagaatatctgagagacatgagccaacattcttacatttgccatgaacatgacgaaatg
cttcttgaagacatttacgtggatgtcacaatgattgaggttcaagcagaaaataagtct
gcaaaaaacgcctcaaagtgtttggacaaggaatgcaaaatctatgatatagcagagcga
gagagagttgctgtaaacttgagcaatctccttaatgtttcaggaaaacgaccaaaagaa
accaaaatagtttccttactggggagagcagggatcggtaaaagtgtacttgtccaaaaa
atctgccatgactgggtgaatgggtccttcaggcagtttgagtttgttttctggtttaag
tgcaggatgctcaattttgcaaagcaatacactttaaaagatctacttttccagccgttc
cttccgaccttaaagaacacggacgaagtctttcagtatctctgccacaactcccgcaaa
gtcctgctcattttggatgactttgaagacttgcaccaccacgatggcctgctgcagtcc
tctgtgtgtggctcagcagaaagaccccacaccgtcaaacagctgcttgcaggcctgctc
cagaggaagttgctgaagggttgcacgatgctcattacagcaaggccaaaagaaaccttc
aaccagtatctcgggagagtggacaaaatagtggaagtgctggggtttcacccgcttcat
gtgcaggagttcctgcacaggtactttgaagactcctctttagctgctgaagccatggtt
tgtcttcaggagcagcagtacctgctcagcatctgctccacccctttactatgcagattc
atctgttttgttctcaaaaccaagcgccggactggagatggccgtttggtattgccatcc
actctcacccgtttgttcctgaacatttttcatatcctgctgcaaggtaaaactcaacac
atcatggttttgcacaggcaaaacatcctggagttgagcaaacatgcctttgcaggggtc
cagtgtcattacagtgtgtgtgaggcctccaaagcagtagaaatgtccaattttgctttg
aagcacggccttctaagaccctttctgatgaatagcgaaggaaaggggcaggagtgtggc
aagactttctctcattcttgcctgcagaacttcctggcgggactttacttgttcttttct
gaagatgtcaagtgcaaagggttgatgaagctaatctccttggagcacagaaagcggaaa
tctcaggaggactggctcgacgttgctcgcaggttcctggtaggactggcttttcaggaa
ggaaatgagttccttcacggcttctcccagcatccgaaggccaacgtcaaaggcaagaag
caaaagagcctgcagaaatatttggctgaactcgacgtctctgcactcagcaccagtaaa
ttggtggagctctgtcattgtgtttatgaaacgcagagcgctgagctaactgcacgggta
gctgctaaactcgatcagaggttgtccttcagaggcacgaggctgactccagctgacatc
ttcgtactgctctacatgatgcggagctcaccaaataactttgctgtcgacctgagggaa
acaaacatcgacttgcctggaatccagcagtttgtcgagttgaggaatgtcacctcattc
agagtgtcggtatgcgatgtgataaaactttgggaacatttggagcaaaatgggttccat
gagctgcttcgtcagtcacttcttaaattttctgtgaatcctttcgagattaagagtttg
aaagatatcgatgaccttgatttactggtacaaattcataaagatagaagattcctttca
agcacacacgacacaacaggaagtgaactctatgagctacctgctgtcagaacattacag
gtgctggagtttgctcttggcccagtggatggacctcaggggtttcaaaaattaactaag
attctaccagctctggcatttttgaagtatctagatcttgaaggaccaagctcccagaaa
gttaaaatgagtgaaaacaaaattggagatgaaggagctgagagactagcaaaagtgttg
tctaatctaacactgctagaaaaactgacattgtcgcggaaccaaatagctgaccgagga
gcacaggagctggctagatcacttcccaacctgaagtttttaaagacactgagtctgtat
gacaatatcattggtgacaaaggggcagaaaaattagcagaaatactcccgataatgaag
tcgttgaaagttctagatgttaaatttaataaaatcacagatactggagcccagagactg
actcagagtttaaaagattgtccccatattgagacaatatggctatggagcccaacaatt
acacactggatgtctgaacacattcaacagattgatgttcgaattaatttacagtag
DBGET
integrated database retrieval system
