Chiloscyllium punctatum (brownbanded bambooshark): 140464696
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Entry
140464696 CDS
T11285
Symbol
ercc4
Name
(RefSeq) DNA repair endonuclease XPF
KO
K10848
DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03420
Nucleotide excision repair
cpun03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
140464696 (ercc4)
03460 Fanconi anemia pathway
140464696 (ercc4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cpun03032
]
140464696 (ercc4)
03400 DNA repair and recombination proteins [BR:
cpun03400
]
140464696 (ercc4)
DNA replication proteins [BR:
cpun03032
]
Eukaryotic type
DNA Replication Termination Factors
Other termination factors
140464696 (ercc4)
DNA repair and recombination proteins [BR:
cpun03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
140464696 (ercc4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ERCC4
HHH_5
Sec3_CC
Motif
Other DBs
NCBI-GeneID:
140464696
NCBI-ProteinID:
XP_072416223
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All DBs
Position
40:complement(62885172..62916632)
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AA seq
901 aa
AA seq
DB search
MTPLLEHESQIFLDLFHEDGLVITAKGLGVDRILFNFLKLYSDPGNLVLVINTATAEEQY
FIEQLRSEGVTHLPRIITNEVLSNDRYTVYTEGGILFVTSRILVVDLLTDRIPANLITGI
LVYKAHRIVDSCQEAFILRLYRQKNKKGFIKAFTDNAVAFSLGFCRVERVMRNLFVRKLY
LWPRFHIAVGSCLDRHKPEVIELHVSLTPSMLAIQTAIMDVMNACLKELKRYNPSLDVEE
LSLENAIGKSFDKALCYYLDPVWHQLGAKTKSLVQDLKVLRTLLEYLTQYDCVTFLNLLE
SLRATERAFGQNSGWLFLDASNTMFVNARARVYKRQDTKLKTSANMINTESKETDKTEKD
LVLEPNPKWEALSEVLTEIKRENESSEASGHVLICASDDRTCAQLKEYITVGAEDLLTRL
YNKTFGKSEKAEDAGETCVKDRKPGKTKARSKPSNGPKLKKAKAETAKNRRKPELTLTQM
VGRENDEGSEKAKEGEGEGENEESVGPETGNEEAQSKGVIAKLPTDACYGILKEPLIVIH
PLKGCSDPYSLSRVLHEIEPRYVVLYDAELSFVRQLEVYRVSKPGKPLRVYFLIYGGSTE
EQRYLTKLRKEKTAFELLIREKAMMVIPEEREGRDDLNPDLVRSVAPATAIADTRKAGGQ
TQKHEQQQIIVDVREFRSELPSLIHRRGIDIEPVTLEVGDYILTPDICVERKSVSDLIGS
LNKGRLYTQCVTMSRYYKRPVLLIEFDPNKPFSLNFRGFAHQDLSINDLASKLTLLTLHF
PRLRLLWCASPHVAAELFEELKQNRPQPDAAAAVAVSGDSGMVSESDRYNPGPQDFLLKM
PGVNTKNSRALMNQVKSIAELVTLSQERLAEILGNTNNARQLWEFIHSSYLDFTVQGKNR
K
NT seq
2706 nt
NT seq
+upstream
nt +downstream
nt
atgactcctctcctggagcacgagagtcagatcttcctggatttgttccatgaggacggg
ctggtgatcacggccaagggcctgggggtggacaggattctcttcaacttcctcaagtta
tacagtgacccggggaacctggtgctggtgataaacacggcgacagcggaggagcaatac
tttattgaacagctacgttctgaaggagtaacccatcttcctcgcatcattaccaatgaa
gttttgagcaatgatcgttacacagtgtacactgaaggtgggatcttgtttgtgaccagc
cgtattcttgttgttgacctcttaacagatcgcattcctgcaaatcttattacaggtatt
ttggtatacaaagcccaccgaattgttgattcatgtcaggaagcgtttatccttcggctt
tatcgacagaagaacaaaaagggttttatcaaggctttcacggacaatgcagtggccttt
agtctcggtttctgtcgcgtggagcgagtgatgcgaaacctgtttgttcgaaagctgtac
ctctggcccagattccatatcgcagtcggctcctgcctggacaggcacaaacctgaagta
atagagttgcacgtatctctgacaccctccatgctggctatccagactgctataatggac
gtgatgaatgcatgcttgaaggaactcaaacgctacaatccatctttggatgttgaggaa
ctgtcccttgagaacgctattggaaagtcatttgacaaggcactctgttattatttggac
ccagtttggcaccagcttggagcaaaaaccaagtccctggtgcaagatttgaaggttctc
cgcactctgttagagtatctgacccagtatgactgcgttaccttcctcaatctgctagag
tctcttcgagctactgagagagcttttgggcagaattcagggtggttatttctggatgcc
agtaacacaatgtttgtgaatgctcgagccagggtgtacaaacgtcaagacacaaagctt
aaaacctcagcaaacatgataaacactgaatcaaaagaaacggacaagacagaaaaggat
ctcgtcctggagccaaatccaaagtgggaagcattgagtgaagtcctaacagagataaaa
agagaaaatgagtccagcgaagcctcaggtcatgtgctgatctgtgccagcgatgataga
acctgtgcccagctgaaggaatacattactgttggagcagaagacttgttaacgagactg
tataacaaaaccttcgggaagagtgaaaaggcagaggatgctggggaaacctgcgtaaag
gacaggaagcctggcaaaaccaaggcgagatcaaaacctagcaatgggccaaagctgaag
aaagcaaaagcagagacagctaaaaacaggaggaagccagagttgactttgactcaaatg
gtaggaagagaaaatgatgaaggttctgagaaagcaaaggaaggagagggggaaggggag
aatgaagaaagtgttggcccagaaactggcaacgaggaagctcaatcaaagggtgtgatt
gcaaaacttccaacagatgcctgctatggaatcctgaaggagcccctcattgttatccat
cccttaaagggctgcagcgatccgtacagcctttcccgtgtactgcacgaaatcgagccc
cgctacgtcgtactgtatgatgcagaactgtcatttgttcgtcagctggaggtttacaga
gtgagcaagcctggcaaacctctccgagtttattttctaatatacggaggctcgacagag
gagcaacgttatctgaccaagctgaggaaagagaaaacagcttttgagcttttgataagg
gagaaggcaatgatggtgatccctgaggagagagaaggaagagatgatttaaacccagac
cttgtacgaagtgttgccccagcaactgctattgcagacacgaggaaagcaggtggtcag
actcagaaacacgagcagcagcaaattatagtggacgtacgggagttccgcagtgagctg
ccttccctgatacatcggcgtggcattgacatcgagccagtcaccctggaggttggtgac
tatattctgacccccgatatctgtgtggaacgtaagagtgtgagcgacctgatcggctct
ttgaacaaaggccgactgtacacccagtgcgtcaccatgtcccggtactacaaaaggccc
gtgcttttgatcgagtttgaccccaacaagcctttctcgctgaacttcagagggttcgca
caccaggacctttccatcaatgaccttgcatccaagctcactttactgactcttcacttc
ccccggctgcggcttttatggtgtgcctccccccacgttgccgccgaattgttcgaggag
ctgaagcagaaccggccacagccggatgcagccgctgccgtggcggtgagcggtgattcc
ggaatggtctctgagtcggacaggtacaaccccggcccacaggacttcctgctgaaaatg
cctggagtcaataccaaaaacagccgggccctgatgaaccaggtgaagagcattgccgaa
ctagtgacactctctcaggagcgactagcagagatcctggggaacaccaacaatgccagg
cagctctgggagttcattcactcctcctatttagattttaccgtacagggaaagaatcga
aagtga
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