Chiloscyllium punctatum (brownbanded bambooshark): 140465053
Help
Entry
140465053 CDS
T11285
Symbol
nup153
Name
(RefSeq) nuclear pore complex protein Nup153
KO
K14296
nuclear pore complex protein Nup153
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03013
Nucleocytoplasmic transport
cpun03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
140465053 (nup153)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
140465053 (nup153)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cpun03019
]
140465053 (nup153)
Messenger RNA biogenesis [BR:
cpun03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
140465053 (nup153)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nup153
Zn_ribbon_RanBP
Nup_retrotrp_bd
Motif
Other DBs
NCBI-GeneID:
140465053
NCBI-ProteinID:
XP_072416986
LinkDB
All DBs
Position
41:complement(48907914..48984711)
Genome browser
AA seq
1433 aa
AA seq
DB search
MAAATTGGGGGKIRNKRHHIISKPYAKNQGIIGRVTSTVKNIVPGWLQKYFGKTSKSEPV
EARGSINNHENDPIIVNETPSFDNGKHQPAPTTSRTAVSTTSSKSALNFSEMLLLRPALS
RAHINCAALDTPAHDCQPSTSSSFPVGSSGFSLVKEIKDSGSLHEDDNISTTSGFSSRAS
DKDVITSRNALPHLWSPDGERSHSVPQQPAVSLKKPSFNLSAFGSSPPSFISTSLLNSSQ
LGDSPFYPGKTTYGGAAAAVGRTSQTRSTPYQVPIRRQMKAKPASSPSYGVTSATARRIL
QSLEKMSSPLADAKRIPSTVTAPLSISLEKSTIDATGWQSKVRKLEAQGPPVQKLQTPVT
VSGVTNRSVFFKPSLTPGGQSNRHIDRTENQNNSVKEKSPIPEISLQATKSDSCSYQIIS
SHATNGLASGGAGGKMKRDKGHYSSRGAQEVKALAPELPEVSLPIKNTTLPTFNFGSPST
APSPVISTVTQLFPDKVVVSNPNHAAFTFSIPNIKATEANLQPISVSTGFTFSEPIDKSA
PLVFVSARPSINAAKCTTSPSVSTPTNERKREDCDGLLKPAKTLKQGSVLDVLKGPEFTS
SSSSTQCITKSLDSTPATVKPLPSTTGRNSSSTESSNTLGFGDKFKPAEGSWKCGSCLLQ
NKITDSKCVACQTAKSVHPTQTDNESANKDKPAFKETPVSFGDKFKPALGTWSCDTCLVQ
NKSEAVKCVACDSPKAGTAVKSALTLPAVSESTRNRELNPSSSTSVGLGLADQFKKPEGF
WKCTVCLLQNKADDSKCVACQSAKPGVVPVVANDPVSAPTDGIQGFGDKFKKPAGSWRCE
TCFIQNSSNVTKCIACTTEKTGSKTDPKGLSSSALSTVASPFSIGIQPSTVDSLQSKDGA
AGFKFGNQGNFKFGTSDSASSTHAFGGHKFDVTGGFKFGITSTQKNSEENKKDNSKAPSG
GFKFEVAAFGNNSTSIKFGASDTSQQVKKSDMALGGFKFGTEEKKETSVVQLQLDKTEER
KDGATVSAVLPEKAVDQESVAAKTFVFGKPDEKQNSLSSTPIAFDKRKDVESQPQSELKK
SEQTKESASLSDTSKAESKTGFTFNLVKPVEKPEATETAQQGFVFGATVNASEQGITKPA
FSLFGNSSSMSAAANAGGSTTTSIFGNSASATNPPFLFGQASTTVGSANLGNCSESTVAA
TKQFLFGSQDIKPAVSNSSSGASAVAFPFSSTPSSNTATTSVFKFGASTTTSSSTGGSSN
SIFGFGSSSTAAANPPAFGTTQTPVPLFGQSSSQPPAAFASADASTFAFSTSCQQTAFGS
QSTSGQPSLFGGQLPNQPPTFGSTSSTSSNTFQFGNSGHSFNFNATNSSNDVFKFGSAST
GATQQPGSSGGFQFNPALGFAVGVGGTNPFSTTSSGRSTVTGRKIKTAVRRKK
NT seq
4302 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggcgacgacgggaggaggaggaggtaaaatccgaaacaagagacaccacatc
attagcaagccttacgccaagaaccagggaatcattggaagagttacaagtacagttaaa
aatattgtacctgggtggctacagaagtactttgggaaaacatctaagtcagaaccagtt
gaagcaagagggtcaataaacaaccatgaaaatgatccaatcattgtaaatgaaacccca
tcgtttgataatggaaagcaccaaccagcaccaacaaccagcaggacagcagtaagcaca
acatcaagcaaatctgctttaaatttctcggaaatgcttctcctgcgaccagctctcagt
cgagcacacattaattgtgctgcactagatactccagcgcatgattgccaaccatccaca
tcctcctcttttcctgttggcagttcagggttctcactggtaaaggaaatcaaagattct
ggctcgctacatgaagatgataacatctccacaacaagtggtttctcttcccgagcttct
gataaggatgtgataacatcaaggaatgcattaccacatttgtggtccccagatggggag
cggtctcattccgttccccagcaacctgctgtgagcttgaaaaagccatcttttaatttg
tctgcatttggaagttcacctccatcttttattagtacttctttactaaattcaagccag
cttggggattctcctttctatcctggcaagactacttatggtggggcagcagcagcagta
ggaagaacttctcaaactcgaagtacaccgtatcaggtgccaataaggagacagatgaaa
gcaaagccagcaagttcaccatcttatggagtgacaagtgccactgccagacgtatcctt
caatctttagaaaagatgtcaagtcctttagctgatgctaaaagaattccttcaacagtg
acagctccattgtccatatccttggagaaaagtaccattgatgcaactggttggcagtca
aaagtgagaaagctggaagcacagggtcctccggtacagaaacttcaaacacctgtgact
gtttcaggagtaactaatagatccgtatttttcaaaccatctctgacacctggagggcag
agtaacagacatattgacaggacagaaaatcaaaacaatagtgtgaaagagaaatcacct
atccctgaaatcagtcttcaagcaacaaaaagtgatagttgttcgtatcaaatcattagt
tctcatgcaaccaatggtcttgcatccggaggagctggaggaaaaatgaagagagataaa
ggacattactcctcgagaggtgcacaggaggtaaaggccctagcccctgaattgcctgaa
gtatctttaccaattaaaaacacaacattgccaaccttcaactttggctctccttccaca
gctccttcacctgtaatatctactgtaacacaactttttcctgacaaggtagtggtatcc
aatccaaatcacgctgcctttaccttttctataccaaatataaaagcaactgaggcaaat
ctgcaacctatttcagtgtctactggatttaccttcagtgaaccgattgacaaatctgcg
ccacttgtctttgtatctgccagaccttccattaatgcagcgaaatgcaccacatcgcct
tctgtttctacaccaacaaacgagagaaaacgtgaagattgtgatgggttattgaaacct
gctaaaactctgaagcagggcagtgtcttagatgttttaaaagggcctgagttcacttcg
tcgtcttcatccacacaatgtataaccaagtccttggacagtacaccagctactgtgaaa
cctttgccatcaactactggaagaaatagttcctccacagagagctcgaacaccttagga
tttggagataagttcaaacctgctgaaggttcctggaaatgtggctcctgccttttacaa
aacaaaatcacagacagtaaatgtgttgcttgtcagactgctaaatctgtacatcccaca
cagactgataatgagtcagccaacaaagacaaacctgcatttaaagagactccagtgagt
tttggagacaaattcaaacctgcattgggtacatggagctgtgatacctgcttggttcaa
aacaaatcagaagctgtaaagtgtgtagcttgtgattcaccaaaagctggaactgcagta
aaatctgcactgactttgcctgcagtgagtgaaagtacaaggaacagagagttgaaccct
tcaagcagtacctctgtcggtttgggattggcagatcagtttaagaaacctgaaggtttt
tggaagtgtactgtatgcctcttacaaaataaggctgacgacagcaagtgtgtggcttgt
cagtctgctaagccaggtgttgtacctgttgttgccaacgatcctgtttcagcaccgaca
gatggaattcagggatttggtgacaaattcaagaagcctgcaggatcctggcgttgtgaa
acctgtttcattcagaattcatcgaatgtaacaaaatgtattgcttgtacaactgagaaa
acaggcagcaagactgaccctaaagggctcagctcatctgcattatcgactgttgcttca
ccattcagcattggaatccagccctcaacagtagactctttgcaaagtaaagatggcgct
gctggttttaaatttgggaatcagggtaattttaaatttggcacttcagattctgcttcc
tcaactcatgcctttggaggacataaatttgatgttacagggggtttcaaatttggaatt
acttcgacccaaaaaaattcagaggaaaacaaaaaggataattctaaagcccctagtggt
ggatttaaatttgaggtagctgcctttggtaacaattcaacttcaattaagttcggtgcg
tcagatacaagtcaacaagtcaagaaaagtgacatggcacttggaggttttaaatttggc
acagaggagaagaaagaaacctcggtagtgcagttacagctggacaaaacagaagaaaga
aaagatggtgcaactgtgagtgcagttctgcctgaaaaagcagtggatcaggagtctgtg
gcagcgaaaacttttgtatttggaaaaccagatgagaaacagaactctttgagctctaca
ccaatcgcatttgataaaaggaaagatgttgaatcgcaaccacagtctgaacttaaaaag
tcagagcaaaccaaagaatcagcatctttgtctgacacttcaaaagcagaatctaagact
gggtttactttcaacttggttaaacccgttgagaaaccagaggcaaccgaaactgcacaa
caaggatttgtatttggggctactgtaaatgcttcagaacaaggaattacaaaaccagct
ttcagcttatttggcaacagttcttccatgtctgctgcagcaaatgctgggggttccaca
accacctccatatttggtaattctgcatctgcgacaaacccaccatttttatttggacaa
gcgagcaccactgtgggaagtgcaaatcttggaaattgttctgaatcaactgttgctgca
accaagcaatttttatttggctcacaggatattaaaccagctgtcagtaattcaagttca
ggggcttctgctgtcgcatttccatttagctcgacacccagtagtaacactgctacaaca
tctgtgtttaagtttggtgcttcaaccacaacatctagttcaacaggtggttcctcaaat
tctatctttgggtttggatcaagttctacagctgcagcaaatcctccagcttttggtacc
acacagacccctgtccctctgtttggacaaagcagcagtcaaccacctgctgcctttgct
tcagctgatgcatctacctttgcgttctcaaccagttgccagcaaactgcctttggttca
cagtctaccagtggtcaaccatctctttttggaggacagttacccaatcaaccgcccaca
tttggttcaacttcatctacctcgagtaacactttccagtttggaaacagtggtcatagt
tttaatttcaatgccactaattcatcaaatgacgtttttaaatttggatctgcttctacg
ggagcaacacagcagcctggatccagtggtggcttccagttcaacccagcccttgggttc
gctgttggggttggcggcaccaatcctttttctacgacatctagtggccgttcaactgtt
actggtcggaagataaagactgcagttaggcgcaagaagtag
DBGET
integrated database retrieval system
