Chiloscyllium punctatum (brownbanded bambooshark): 140465794
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Entry
140465794 CDS
T11285
Symbol
dhx8
Name
(RefSeq) ATP-dependent RNA helicase DHX8 isoform X1
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
140465794 (dhx8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpun03041
]
140465794 (dhx8)
Enzymes [BR:
cpun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
140465794 (dhx8)
Spliceosome [BR:
cpun03041
]
Complex C
Other components
Step II factors
140465794 (dhx8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
Helicase_C
WHD_HA2
S1
DEAD
GIPC1_GH2
AAA_22
AAA_19
nSTAND3
PRP38_assoc
Transformer
AAA_16
ABC_tran
Sigma54_activ_2
TsaE
T2SSE
RSRP
nSTAND_NTPase5
PhoH
Motif
Other DBs
NCBI-GeneID:
140465794
NCBI-ProteinID:
XP_072417674
LinkDB
All DBs
Position
42:18805031..18856797
Genome browser
AA seq
1208 aa
AA seq
DB search
MADVALDELSKLEYLSLVSKVCTELDNHLGINDKDLAEFIINLAEKNITFETFKGALVKN
GAEFTDSLISNLLRLIQTMRPPAKPSTSGKVETVKPKSEKEKMKELFPALCLPDTLPTKS
LLDEDDMKVAADALKELEALMPSKADHKKSSKRSSNEKGKRKRRSRSRSRDRDRDRDRDR
DRKRHRRSRSRSHSRDRNKSKSSRRSRSRSLSPNRDHKDRVRANEKNCEKRKDRHVDRPP
PEEPSVGEIYNGKVTSIMQFGCFVQLEGLRYQPFPRKRWEGLVHISELRQEGRVANVADV
VSKGQRVKIKVLSFTGSKTSLSMKDVDQDTGEDLNPNRRRNVGGETNEETTMRNPDRPSN
LSLVNTPEIEDDVLERKRLTKISDPEKWEIKQMIAANVISKEEYPDFDEETGILPKVDDE
EDEDLEIELVEEEPPFLRGHTKQSMDMSPVKIVKNPDGSLSQAAMMQSALAKERREMKQA
QREAEMDSIPMGLNKHWVDPLPDVDGRQIAANMRGIGMMPQDIPEWKKHAFGGNKASYGR
KTQMSILEQRESLPIYRLKEQLVQAVHDNQVLIVIGETGSGKTTQITQYLAEAGYTTRGK
IGCTQPRRVAAMSVAKRVSEEYGCCLGQEVGYTIRFEDCTSPETVIKYMTDGMLLRECLI
DPDLSPYAIIMLDEAHERTIHTDVLFGLLKKTVKKRPDMKLIVTSATLDAVKFSQYFYEA
PIFTIPGRTYPVEVLYTKEPETDYLDASLITVMQIHLTEPPGDILVFLTGQEEIDTACEI
LYERMKSMGPDVPELIILPVYSALPSEMQTRIFDPAPPGSRKVVIATNIAETSLTIDGIY
YVVDPGFVKQKVYNSKTGIDQLVVTPISQAQAKQRAGRAGRTGPGKCYRLYTERAYRDEM
LTTNVPEIQRTNLASTVLSLKAMGINDLLSFDFMDAPPMETLITAMEQLYTLGALDDEGL
LTRLGRRMAEFPLEPMLCKMLIMSVHLGCSEEMLTIVSMLSVQNVFYRPKDKQALADQKK
AKFHQAEGDHLTLLAVYNSWKNNKFSNPWCYENFIQARSLRRAQDIRKQMLGIMDRHKLD
VVSCGKATVRVQKAICSGFFRNAAKKDPQEGYRTLIDQQVVYIHPSSALFNRQPEWVVYH
ELVLTTKEYMREVTTIDPRWLVEFAPAFFKVSDPTKLSKQKKQQRLEPLYNRYEEPNAWR
ISRAFRRR
NT seq
3627 nt
NT seq
+upstream
nt +downstream
nt
atggcggacgtggcgttagacgagctcagtaagctcgagtatctgtccctggtgtccaag
gtctgcactgaactggacaaccatctgggcatcaacgacaaggatctggctgaatttatc
atcaatctagctgaaaagaatattacttttgagactttcaaaggagcactggtgaaaaat
ggagctgagtttacggactcactcatcagcaatttgttacgtctaatacagaccatgcga
cctccagccaagccatcgacatctggcaaagttgaaacagtcaaaccaaaatcagaaaag
gagaaaatgaaggagctgttccctgctctctgcctgcctgataccctgcctacaaagagt
ctgctggatgaagatgatatgaaagtagcggcagatgcattgaaggagcttgaagccttg
atgccatcaaaggcggatcataaaaagagcagcaaacgcagctctaacgaaaaggggaaa
aggaagagaaggagtcgtagtcgcagcagagacagagacagagacagagacagagaccga
gaccggaagcgacatcgcaggtcaaggtccagatcacactccagagatcgaaacaaaagt
aaatccagccgacgatccagaagcaggagtcttagccctaacagggaccacaaggatcga
gtcagagcaaatgagaagaactgtgagaagagaaaagatagacacgtagacaggcctcca
ccagaagaaccatctgtgggcgagatctataatggcaaggtcaccagtattatgcagttt
ggatgctttgtacagctggaaggtttaagatatcaaccatttcccagaaaacgatgggag
ggtttggtacacatctctgagctcaggcaagagggacgtgtagccaatgttgctgatgtt
gttagcaaaggtcaaagagttaagatcaaggtgctatcatttactggatccaaaacgagc
ttgagcatgaaggatgtagatcaagacactggagaggatctaaacccaaaccggcgccgc
aatgttggtggggaaactaacgaggaaactaccatgaggaatcctgacagaccaagtaat
ctgtcactggtgaacacccctgagattgaagatgatgtgcttgaacgcaaacgtctcaca
aaaatctctgatcctgagaagtgggagatcaaacagatgattgcagcaaatgttatctca
aaagaggagtatcctgactttgatgaagaaacgggcatccttccgaaagttgatgatgaa
gaagatgaagaccttgaaattgagctagtggaagaagagcctccgttcctcaggggacat
acaaagcagagcatggacatgagtcctgttaaaatagtaaagaatcctgatggctcacta
tcccaggctgccatgatgcaaagcgctttggctaaagaaaggcgggagatgaagcaagca
cagcgggaggcagaaatggactcgatcccaatgggactgaataaacactgggttgatcca
ctacctgatgttgatggccgacagattgcagcaaacatgaggggaataggaatgatgccc
caagacatacctgagtggaagaagcatgcgtttggtggaaacaaggcatcttatggtcgt
aaaacccaaatgtctattcttgagcagagagagagcctgcccatctatagacttaaagag
cagctggtacaggctgtccatgacaaccaagtcctgattgtcattggggaaactggttct
ggtaaaactacacaaatcacccaatacttggctgaagcggggtatacaacgcggggaaaa
attgggtgcacgcaaccaagacgtgtagctgcaatgtcagttgctaagagagtgtcagaa
gagtatggatgctgtttaggtcaagaggttggttacaccattcgatttgaggattgcacc
agtccagagactgtgataaagtatatgactgatggtatgttgctcagagagtgcctcata
gatcctgacctgtctccgtatgcaatcatcatgttggatgaggcccatgagaggactatc
cacactgatgttctctttggacttctgaaaaagactgttaaaaaacgtcctgatatgaaa
ttgattgtaacatcagccacactggatgcagttaaattctctcagtatttttatgaggca
cctatcttcacaattcctggccgaacatacccagtggaagtgctttatacgaaagaacct
gaaactgactatctggatgctagtttaattacagtgatgcagattcatttaacagaacca
ccaggtgacattctggttttcctaactggtcaggaagaaatcgatactgcgtgtgagatt
ctgtacgaacgaatgaaatccatgggcccagatgtgccagaattgattattctgcctgtg
tattctgctttaccaagtgagatgcaaaccagaatttttgatccggcccctcctggtagc
agaaaggttgtaattgctaccaatattgctgaaacatcactgactattgatggcatctac
tatgttgtggatcctgggtttgttaagcagaaagtctataactcaaagacgggaattgac
cagctcgtggtgactccaatttcacaggctcaagctaagcagcgcgctggtcgtgcagga
aggacgggacctgggaaatgttatcgactctacactgaacgtgcctacagggacgaaatg
ttgaccacaaatgttcctgaaattcaaagaacgaatctcgctagtacagtactgtcactc
aaggctatggggatcaatgacctgctttcatttgattttatggatgctcctcctatggaa
accctaatcacagccatggaacagttgtacacgctgggagcactagatgatgaaggtttg
ctgacgagacttgggcgcaggatggcagagtttcctctggaacccatgctttgtaaaatg
ctgatcatgtctgtacatcttggatgcagtgaagagatgttaacaattgtgtccatgcta
tctgtacagaatgttttctaccgaccaaaggataagcaagctcttgcagatcagaagaaa
gcaaagttccaccaagcagaaggggatcatctcaccttgcttgctgtctacaattcatgg
aaaaacaataaattttccaacccttggtgctatgaaaacttcatccaagcgcgttccctt
cgcagagcacaggatatccgtaaacagatgctgggtatcatggacagacataagctggat
gttgtttcatgtggaaaagccacagtgcgagttcagaaagcaatctgcagtggcttcttc
cgcaatgcagcgaagaaggacccacaagaaggataccgtacactgattgaccagcaggtg
gtatacattcacccctccagtgctctcttcaacagacagcctgaatgggttgtatatcat
gaacttgtcttgactactaaggaatacatgcgagaagtgaccaccattgacccacgctgg
ctagtagagtttgcacccgccttcttcaaagtgtccgacccaactaaactcagcaagcaa
aagaaacagcagaggctggagcccctgtataaccgctatgaagagcccaacgcctggaga
atctcgcgcgcgttcagacgacgttaa
DBGET
integrated database retrieval system
