Chiloscyllium punctatum (brownbanded bambooshark): 140465885
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Entry
140465885 CDS
T11285
Name
(RefSeq) integrin alpha-8-like
KO
K06584
integrin alpha 8
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun04510
Focal adhesion
cpun04512
ECM-receptor interaction
cpun04514
Cell adhesion molecules
cpun04810
Regulation of actin cytoskeleton
cpun04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
140465885
04514 Cell adhesion molecules
140465885
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
140465885
09142 Cell motility
04820 Cytoskeleton in muscle cells
140465885
04810 Regulation of actin cytoskeleton
140465885
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
cpun04515
]
140465885
Cell adhesion molecules [BR:
cpun04515
]
Integrins
Integrin alpha subunits
140465885
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Integrin_A_Ig_1
Integrin_A_Ig_3
Integrin_A_Ig_2
FG-GAP
FG-GAP_3
Integrin_alpha
ITGAX-like_Ig_3
Prismane
DUF11
Motif
Other DBs
NCBI-GeneID:
140465885
NCBI-ProteinID:
XP_072417881
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All DBs
Position
42:34211453..34365074
Genome browser
AA seq
1065 aa
AA seq
DB search
MIKHLVNFYFSLAVFDLDTKVWKMHACYLMEILSVYLLGLLHLHAFNFDAENPIIYSGPE
GSYFGFSVEFYLPDGGNPGVLIGAPKANTTQENIIEGGAVFLCPWSSNGNHCNIIPFDME
GNRHIHNVLEEMKDYKSHQWFGATVKSLKDQVLACAPLYHWKYSRTINSKIETGGVTPVG
TCLIAVQNFRSYAEYSPCRSNILQWQLNISNIPDQRFCEAGWSSVITEAGDILLGAPGSY
FWQGQLFATSNIDMIVKDYKRDQPLRPLGLKKETKDARGKKDNHFEGYSLAMGEFTGDSV
KDYLLGAPRAKHALGSVIIVDSMTMISKQTIAGEQVAAYFGYVVAATDINSDGTDDILVG
APLFMDLGQDGKQREVGRVYVYLQDQLENFKQPTQTITGTDKFGRFGSAITILGDLDSDG
YKDVAIGAPYAGEDSNGRVFIYLGYANGLLAKSYQELKGTWAPGLVSAGFGFSLQGGADI
DANNYTDLIVGAHNVDKVLLYRARPVITADAHIILVPDILNPEEKKCVLSQKSTLVTCLE
VRVCVMVKGHDIGHQFALNGQIELDKNKQRSQRRILFLQSYQAQENFQFSLTRNKQAACQ
NFTAYLRQETEFKDKLSPIVVTVNCSLSEEQQLGSGKLKPVLSPHSQTWVTKKTRILLDC
GNDGICIPDLKLNATVDKTHLIVGDPNPLTVTITAVNNGEGAYETELHIPILPQVDFNKV
VQNSKGTTKLSCNVQAENATKTLICDLGNPMKSGAQISAMFHFMVHNLDQVENITLSMQI
KSKNIRNSSSEEIYLTFPVQVVTQIYLKGASLPENIVLPYVDQESSADLEVKNQPLPMIQ
HTYELRNNGPSAISDAVLEIDWPAAFLGNSLLFKSKIIPWGQINCTVNASNAENWVETMS
TMSPLSITTENSRHNLNKRDVSKVENTTEEIIFNLTCTTVTCVKIMCRVGLLEKEKRAVI
NINSQLRMEVFVQNRKKQFTFQSKASYIVQEVPYKVQPVEFPSDSTMVVTRIDRSGPEVV
LPIPVWCIIVAVLGGLLLVALMVFILWKCGFFKRKLPPTEREELL
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacacttagtcaacttctatttttctttagctgtgtttgatttggacacaaag
gtctggaaaatgcacgcttgctatttaatggaaattttgtccgtttatctgcttggacta
ttgcaccttcatgcattcaattttgatgcagaaaacccaatcatttattcggggcctgaa
ggaagctattttggattttctgtcgagttctacttgccagatggtgggaatccgggtgtg
ctgattggtgcccccaaggcaaatactacacaagaaaacataatagaaggtggagcagtg
tttctctgtccttggtcaagtaatggaaatcactgcaacataataccattcgacatggag
ggtaaccgacatattcacaacgttctagaagaaatgaaagattacaaatcccaccaatgg
tttggggctacagtcaaatcactcaaggatcaagttttggcctgcgctccactgtaccac
tggaaatattcacggaccatcaactccaagatcgagactggtggagtgacgccagtgggc
acgtgcctaatagcagttcaaaacttcaggagctatgcagaatattcaccctgtcgttcc
aatattttgcaatggcagcttaatatatcaaacatcccagatcagcgtttttgtgaagcc
ggctggagcagtgtaatcacggaggcaggagacatactacttggtgcacctggcagttac
ttctggcaaggtcagttatttgctaccagcaacattgacatgattgtcaaggattacaaa
cgtgatcagcctctgagaccactaggattaaagaaagaaacaaaagatgccagagggaaa
aaagataaccattttgaaggttactcactcgctatgggggaatttacaggagactctgtt
aaagattatcttctgggagctcccagggcaaaacacgcattgggatcggtaattattgta
gattctatgaccatgattagcaaacaaactattgccggcgaacaggtagctgcgtatttc
ggctatgtggtggctgccacagatataaacagcgatgggacagacgatatcttagtcgga
gcgcctctatttatggaccttggacaggatggcaaacagcgtgaggtcgggcgggtttat
gtttatctccaagaccagcttgaaaacttcaagcagccaacgcagaccatcacgggaact
gataagtttgggcgctttggcagtgccatcaccatccttggggaccttgactctgatgga
tacaaggatgtggcgatcggagcaccatatgctggtgaagatagcaatggaagagtgttc
atttacctgggctatgctaatggactgctcgcaaaatcttaccaagagctgaagggaacc
tgggcccctggtttagtatcagcaggatttggcttctcgctgcaaggaggcgcagatata
gatgcaaataactacaccgatttgattgttggtgctcataatgttgacaaagttctactg
tacagagcaaggcctgttataacagcagacgcccatatcatacttgtgcctgacattcta
aatccagaagaaaaaaaatgtgtattgtcacagaaatctaccttagtgacatgtcttgaa
gttcgggtttgtgtaatggtaaaaggacatgacattggccaccaatttgctttgaatggt
caaatcgagttggacaaaaataagcagcgttcccagcgacgaatccttttcctgcaatca
taccaagcacaggaaaatttccagttttctctgacgagaaataaacaagcagcctgccaa
aatttcactgcctacctcaggcaagaaacggagtttaaagacaagctgagtccgattgtt
gtcactgtgaactgcagtctgtcggaggagcaacagctgggttctggcaaactgaagcca
gtgctgagtccccacagtcaaacctgggtgactaaaaagactcgcattcttctggactgt
ggaaatgatggaatatgcatcccagatctcaaattaaatgcaacagtagataagacccac
ttgattgttggagacccaaatccactcactgtgactatcactgcagtcaataatggagaa
ggagcctatgaaacagaacttcacattcccatccttccacaagtagacttcaacaaagtt
gtgcagaacagtaagggcaccacaaagctgagctgtaacgtgcaggcggaaaatgccaca
aaaactttgatctgtgacctcggtaatcctatgaaaagtggtgcacagatatcggcaatg
ttccatttcatggttcacaacttggaccaggtggagaatatcacgctcagcatgcagatt
aaaagtaaaaacatacgaaattccagcagtgaggagatctatttgacgtttcctgttcaa
gttgtgacccagatttatctgaaaggggcttcactacctgagaacattgtcctcccctat
gttgatcaggagtcatctgcagatctagaagtgaagaatcagcctctgccaatgatacag
cacacctatgagctacgtaacaatggtccatcagcgattagtgatgctgtacttgaaatt
gactggcctgcagctttccttggtaacagtctactgttcaaatcgaagatcattccatgg
ggccaaatcaactgcacagtgaacgcttccaatgctgaaaattgggtagaaacaatgagt
acaatgagtccattgtctataactactgagaactcccgacataacttaaataaaagagat
gtcagcaaggtagaaaatacaacggaggagatcatctttaatttgacttgcaccactgtg
acctgtgtgaaaattatgtgccgcgtgggacttctggagaaagagaagcgagctgtgata
aacataaactctcagctcaggatggaggtctttgtgcagaaccgtaagaaacagtttaca
ttccagtccaaagcatcatacattgtgcaagaagtgccatacaaagtacaacctgtagaa
tttcccagtgacagcacgatggtagtaactcgaattgaccgcagtggtcctgaggttgtt
ttacccatacctgtctggtgcattatagttgctgttcttggtggtctgctccttgtggcg
ctgatggtattcatcctttggaagtgtggatttttcaaacggaaactgccaccaactgaa
agggaagagttgctgtaa
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