Chiloscyllium punctatum (brownbanded bambooshark): 140466214
Help
Entry
140466214 CDS
T11285
Symbol
ddx1
Name
(RefSeq) ATP-dependent RNA helicase DDX1
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
cpun03041
]
140466214 (ddx1)
03016 Transfer RNA biogenesis [BR:
cpun03016
]
140466214 (ddx1)
Enzymes [BR:
cpun01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
140466214 (ddx1)
Spliceosome [BR:
cpun03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
140466214 (ddx1)
Transfer RNA biogenesis [BR:
cpun03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
140466214 (ddx1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
CMS1
ResIII
Motif
Other DBs
NCBI-GeneID:
140466214
NCBI-ProteinID:
XP_072418059
LinkDB
All DBs
Position
3
Genome browser
AA seq
740 aa
AA seq
DB search
MAAFSEMGVMPEIAEAVEQMDWLLPTDIQAESIPLILGGGDVLMAAETGSGKTGAFSIPV
IQIVYETLKDHEEGKKGGKTSVKTGGAVFSKWQMNPYDRGSAFAIGSDGMCCQSREVKEW
HGCRSTKGVIKGKYYYEVHCHDQGLCRIGWSTSQASLDLGTDKFGFGFGGTGKKSHCKQF
DSYGEEFTMHDTIGCYIDLDKGNVSFSKNGRDLGHAFDIPAHLKTQGLFAACVLKNAELK
FNFGEEEFKFPPKDGFTALSKAIDGHVVKSPHTGTAQVAQTKNLPNAPKALIIEPSRELA
EQTLNNVKQFKKNISDPKLRELLIIGGVSAKDQLAVLDQGVDIVVGTPGRVDDLVSTGKL
NLSQVRFLVLDEADGLLTQGYSDFISRIHSQIPQVTSDGKRLQVIVCSATLHSFDVKKLS
EKIMHFPTWVDLKGEDSVPETVHHVVLKVNPKTDHHWEKLQRHIRTDEVHAKDNTRPGAN
SSEMWSEAIKILKGEYTVRAIKEHKMDQAIIFCRTKIDCDNMEQYFIQMGGGPDKRGHQF
SCVCLHGDRKPNERKQNLERFKKADVRLLICTDVAARGIDIHGIPFVINVTLPDEKQNYV
HRIGRVGRADRMGLAVSLVATEKEKVWYHVCPNRGRGCYNTRLKDQGGCTIWYNELQLLS
DIEEHLNVIITQVEPDLKIPVDEFDGKVVYGKKRATGGGQYRGHVDALASAVQELAALEK
EAQSSFLHFGYLPNQLFKPF
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgttctcagagatgggtgttatgccggaaattgccgaggcagtagaacagatg
gactggcttcttccaacagatatccaagctgaatctatacctttgattctgggtggtggt
gatgtgctaatggcagcagaaactggcagtggcaagactggagcattcagtataccagtt
attcagattgtatatgaaacactcaaggaccatgaagaaggcaaaaaagggggaaaaaca
tctgtcaagactggtggtgcagtatttagcaaatggcagatgaacccctatgatagaggt
tcagcctttgccatcggatccgatggcatgtgttgtcagagcagggaagtaaaagagtgg
catggatgcaggtccacaaagggagtgatcaagggcaaatattactatgaagtacattgc
catgatcaaggcttgtgtagaattggttggtctacctcacaggcatcactagatttgggt
actgacaaatttggctttggatttggtggcactggaaagaagtcccattgcaaacagttt
gacagctatggagaggaatttaccatgcatgataccattggatgctatatcgatcttgat
aaaggaaatgtaagcttttcaaaaaatgggagagaccttggacatgcctttgatattcct
gctcatttaaaaacccaaggcttatttgctgcttgtgttttaaagaatgctgaacttaaa
tttaacttcggtgaggaagaattcaagttcccaccaaaagatggttttacagcactaagc
aaagctattgatggccatgttgtaaagtcgccacataccggcacagcacaagtggctcaa
actaaaaacttaccaaatgctccaaaggcactcattattgaaccatcaagggaactggct
gaacaaaccctgaataatgtcaagcagttcaagaaaaatatttctgatcccaaactaagg
gagcttctgataattggtggtgtttctgcaaaagatcagctagctgtcctggaccaagga
gtggatattgttgtcggaactcctggaagagtagatgaccttgtctcaacaggaaaactg
aatctgtcccaagttagattcttggtgttggatgaagctgatggactgcttactcaaggc
tactcagacttcatttcaagaatacattctcagatccctcaagtaacatctgatggcaaa
aggttgcaggtcattgtttgctctgccacactgcattcatttgatgttaagaagttgtca
gagaagatcatgcatttcccaacctgggtagatcttaaaggagaagattctgttcctgag
accgtacatcatgttgttctaaaagttaatccaaaaaccgatcatcactgggagaaactt
caaaggcatatccggacagatgaagtccatgcaaaagataacacgagacctggcgccaat
agttcagagatgtggtcagaggctattaaaatactgaagggagaatatacagtccgtgca
atcaaagaacacaagatggaccaagcaatcattttttgcaggactaagattgactgtgat
aacatggaacagtactttattcagatgggaggaggaccagacaaaaggggacatcaattt
tcgtgtgtctgcttgcatggtgatagaaaaccaaatgaacgaaagcaaaacctggaaaga
ttcaagaaagcagatgtaagactcctgatctgcactgatgttgctgccagaggtattgac
attcatggaattccttttgtaattaatgtgactcttcccgatgaaaaacaaaactatgtt
cataggattggtagagtgggcagagctgacaggatgggtctagccgtttccttggtggca
actgagaaagagaaggtttggtaccatgtatgtccaaatcgcgggagaggttgctataac
accagacttaaggatcagggtgggtgcaccatatggtacaatgaactacagctgttgtct
gacattgaagagcacctgaatgtcatcatcactcaagttgagcctgacctgaaaatacca
gtggatgagtttgatggcaaagtagtctatggaaagaaaagagcaacgggaggtgggcag
tataggggccatgttgatgctttagcatctgcagtacaagagttggctgctcttgaaaag
gaggctcaatcctctttcttacattttggctatcttcccaatcaacttttcaaacccttt
tga
DBGET
integrated database retrieval system
