Chiloscyllium punctatum (brownbanded bambooshark): 140466810
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Entry
140466810 CDS
T11285
Name
(RefSeq) laminin subunit beta-1-like
KO
K05636
laminin, beta 1
Organism
cpun Chiloscyllium punctatum (brownbanded bambooshark)
Pathway
cpun04510
Focal adhesion
cpun04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
cpun00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
140466810
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
140466810
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Gene cluster
GFIT
Motif
Pfam:
EGF_laminin
LAMININ_IV_B
Laminin_N
EGF_LMN_ATRN
LAMB1
F5_F8_type_C
ATG17_like
BNR_6
Motif
Other DBs
NCBI-GeneID:
140466810
NCBI-ProteinID:
XP_072418559
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All DBs
Position
44:24546374..24644684
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AA seq
1782 aa
AA seq
DB search
MFHFRILTVLVILWHCAIAQGPEFSYGCAEGSCYPATGDLLIGRADRLSATSTCGLHKPE
PFCIVSHLQEEKKCFSCDSRTVFAENPKSHRIENVVTTFAHNRLNTWWQSENGVENVSLQ
LDLEAEFHFTHLIMTFKTFRPAAMMIERSSDFGKTWQVYRYYAYDCESSFPGIPTGSLKK
VDDIICDTRYSDIEPSTEGEVIYRVLDPAFKIEDPYSQRIQNMLKITNLRIKFTKLHTLG
DNLLDSRIEIKEKYYYAIYDMVVRGNCFCYGHASECAPVHDSDDQDVDGKVHGRCVCRHN
TKGLNCELCQDFHHNAPWKPAEGRNSNACQRCSCNGHADKCHFDMAVYIASGNVSGGVCD
GCRNNTMGQHCEQCKPFYYQHPERSIRASDICEPCNCDPAGSLNGGICDSYTDLTANLIA
GQCRCKLNIEGERCDLCKEGFFGLSADDPLGCQSCTCNHLGTHPGGTPCDDVTGNCFCKR
LVTGRNCDQCLPQHWGLSSDLDGCRPCDCDLGGSYSNDCSAETGQCPCKNHMVGRRCNEV
ESGFYFIALDHYTYEAEEAALGPEATIVQRQSPQNHSPTWTGIGLVKAPEGAYLEFHVHN
IPYSMEYDLLIRYEPQLPKNWEEAKITVFRPGKIHSSSRCGNTTPADDNQVFSLPSGSRY
VVLPRPVCFEKELNYTIRLELTKYSTDDEMETPYTLIDSLVLMPHCKSLDIFSVGELSEI
VTNKAWETFQRYRCLENSQSVTKTPMTDVCKGILSSISSIIHEGALPCQCDPQGSLSSVC
NPNGGQCQCRSSVVGRNCDRCAPATYGFGPSGCRPCDCHLEGSVNEFCNPGTGQCRCKEG
VYSRQCDQCQPGYWGFPNCRPCQCNGHTDHCDLESGECLGCRDHTSGHNCDSCMSGYYGN
PILGSGDHCRPCPCPDGPDTGRQFASGCYQDPSSQNIVCLCQDGYTGARCDECASGFYGN
PNETRGHCQGCQCSNNIDMTDAESCDKQTGACLKCLYHTEGEHCELCKLGYYGKALQQDC
KKCVCNYLGTVKEQCTSADECHCNQTTGQCPCLPNVTGLMCDQCAPNTWKLASGTGCELC
NCNEIHSRAASCNEFTGQCQCMAGFGGRTCSDCQEFFWGDPDVECMRCDCNEFGIETQQC
NQANGHCICREGIAGERCDKCARGYSGTFPHCEPCHACFRLWDKEIEELTNQSKQLVAQA
DEVKASGIVGPYQETVSAVQEKINDIRTLLAENPATEPLDSIGNLLDEAKKKVLDLAEKV
TVIESDLATTADRSNVTDQEISVLQTDAESLKAVVNELAEQLEYIKNSDVHGALDSVQKY
FNQSVEAEMTVNASTTDPGSILMESLSTREKVDDMISQSQDHFEQQQKEHSQSLEELADK
LQSLDLSPLSKKICGGPAGMPCTEAECGGPNCRADDGTRKCGGIGCDGLVTLAHNAWQHS
MAFDTEILNALAEVDQLSKMVADAKVKADEAKLNAQKVLLRTNATKDKVDKSNEDLRNLI
KQIREFLTQDGADLESIEAVANEVLKLEMPTTPQQLQDLTNDIRDRVESLSDVEVILNQS
AADIERAEALLDEARKAKIHATDVKVAADRVKEALDEAEKAQNAAVKAIKQANEDIEGTQ
DLLTSIESETVASEQSLNNATERLAQIEKDIDEIKQKTTDNTHTAENIGDTADKIKQTAD
EAKQVLDTVLKGKYTVVEDTIIKKSDAASDARKKAKLLQVEAESLLSDASRKLELLKKLE
KSYEDNQKALEEKAQKLIKLEEDVRLLLQTISQKVAIYSTCL
NT seq
5349 nt
NT seq
+upstream
nt +downstream
nt
atgttccacttcaggattttaactgttttagtcatactttggcactgtgctattgcacag
ggaccagagttcagctatggatgtgctgagggaagctgttacccagccacaggagacctg
ttgattgggcgtgcagatagactatctgcaacatccacctgtggtttgcataagccagag
cccttctgcattgtcagtcaccttcaggaagaaaaaaagtgcttttcatgtgattcgcgc
acagtttttgctgaaaatccaaaaagtcatagaattgagaatgttgtcacaacatttgct
cacaatcgactaaatacctggtggcaatctgaaaacggtgtggaaaatgtttcccttcag
ctggatctggaagctgagttccattttacccacctcatcatgactttcaagactttccgc
ccagctgctatgatgatagagcgatcttctgattttgggaaaacctggcaggtctatcgg
tattatgcttatgattgcgagtcgtcctttccaggcattccaacaggatcattaaagaaa
gtggacgacattatctgtgacactcggtactctgatattgagccttctactgaaggagag
gttatctatcgtgtgttggatccagcctttaaaattgaagatccatatagccagagaata
caaaatatgctgaagatcacaaatctaaggataaagttcaccaaactccatactctgggt
gacaatttgctagactctcgaatcgaaatcaaagaaaaatattactatgctatctatgac
atggtagttcgaggaaattgtttctgctatggacatgctagtgagtgtgctcctgttcat
gattctgatgaccaggatgtggatgggaaggtgcatggtcggtgtgtatgtcgtcacaac
accaaggggttaaactgtgagctatgtcaggacttccaccataatgcgccttggaaacct
gctgaaggacgcaacagcaatgcatgccaaagatgtagctgcaacggacatgctgataaa
tgtcactttgacatggctgtgtatatagcatccggtaacgttagtggtggtgtttgtgat
ggctgtcggaataacacaatgggacaacactgtgaacaatgtaaacctttctactaccag
catccagaacgaagtattcgtgccagtgacatctgtgaaccttgtaactgtgaccctgct
ggatcattaaatggtggaatctgtgacagctacacggatttgacagctaatctcattgcg
gggcagtgccgctgtaaactcaacattgagggtgaacgctgtgatctctgcaaagagggt
ttctttggcctaagtgcagatgacccattgggttgccagtcatgtacctgtaaccatttg
ggaactcatccaggcggaactccatgcgatgatgtaacgggaaattgtttctgtaagcgt
ctagtgacgggaaggaactgtgatcagtgtctgccgcagcactggggattaagcagtgat
cttgatgggtgtcgcccctgtgactgtgacttggggggatcctacagcaatgactgttct
gcagagacaggccagtgcccgtgcaaaaatcatatggttggacgtcgctgcaatgaagtt
gaatctgggttttattttattgccctggatcattacacatacgaggcagaggaggctgcc
ttgggtcctgaagcgacaatagtacagcgccagtctccgcaaaatcattctccaacctgg
acaggaattggattggtaaaggctcctgaaggagcgtatctagaattccatgtacacaac
atcccatattccatggagtatgatctgctgatacgttatgaacctcagctaccaaaaaac
tgggaagaagcaaaaataactgtgttccgtcctggtaaaattcacagcagcagtcgatgt
gggaatactacacctgctgatgacaaccaagtcttttctctgccatcaggatcaagatat
gtggtcctacctcggcctgtatgctttgagaaagaacttaattacaccattcgtttagag
ttaacaaagtactcaactgatgatgaaatggaaactccttatacactcatagattcgctt
gtactcatgccccactgcaagtcactggatatattctctgtaggggaattgagtgagatt
gtcacaaacaaagcctgggaaaccttccaacgataccgctgcttggagaacagtcaaagt
gttactaaaactccaatgactgatgtctgtaagggcatcctatctagcatttcttccata
atccacgaaggagctttaccatgccagtgtgatcctcagggatctctcagttctgtttgt
aatcccaatggaggacaatgccaatgccgctccagtgtagttggccgtaactgtgaccgg
tgtgctcctgcaacttatggttttggtcctagtggctgccggccttgtgattgtcatctg
gaaggttcagtcaatgaattttgcaaccctggtactggccagtgtcgctgcaaagaaggg
gtctatagtcggcagtgtgatcagtgtcagcctggttactggggatttccgaactgtcgt
ccgtgccagtgcaatggacatacggatcactgtgacttagaaagtggcgaatgtttgggc
tgcagagatcacactagtggacataattgtgacagctgtatgtcaggttattatgggaac
cctatacttgggtccggtgatcactgtcgcccatgtccttgcccagatggtccagatact
ggacggcagtttgcctctggctgttaccaggatcctagttcacaaaatattgtgtgcctc
tgtcaagatggatacacaggtgctcgatgtgatgaatgtgcttctggattttacggtaat
ccgaatgaaacaagagggcattgtcaggggtgccagtgcagcaacaacattgacatgact
gatgcagaatcatgtgacaagcaaactggagcctgcctgaagtgtctatatcacactgag
ggtgaacattgtgaactctgcaagcttggttattatggcaaggcactgcaacaggattgt
aaaaaatgtgtctgcaattacttgggtactgtaaaggagcaatgcacttctgcagatgaa
tgccattgtaaccaaaccactggtcaatgcccgtgtcttccaaatgtgactggtcttatg
tgtgatcagtgtgcacctaatacttggaaactagcaagtggaacaggctgtgaactctgc
aactgtaatgaaattcactcacgtgcagcatcttgtaatgagttcaccgggcagtgtcag
tgcatggctggatttggagggcgcacatgtagtgactgccaagaattcttctggggagat
cctgatgtggagtgtatgagatgtgattgtaatgaatttggtattgagacccagcagtgt
aaccaagccaatggtcactgcatctgtcgggaagggattgcaggagaacgttgtgataaa
tgcgctcgagggtactctggtacattccctcattgtgaaccatgtcatgcatgcttcaga
ctgtgggataaagaaattgaagagctgactaatcaaagcaaacaacttgtagctcaggct
gatgaggtcaaagctagtggaatagttgggccttaccaagaaactgttagtgctgtccag
gaaaaaattaatgacatacgaactctacttgctgaaaatcctgctactgaaccacttgac
agtattgggaacctcttggatgaagccaagaagaaagtacttgaccttgcagaaaaggtt
actgtaattgaatcagatcttgcaactacagcagaccgaagtaatgtgacagaccaagaa
ataagtgtccttcagacagatgctgagagtttgaaagctgttgtgaatgagttagcagaa
caattggaatacattaagaactctgatgtccatggagccttggacagtgtccagaaatat
tttaaccaatctgtcgaggctgaaatgacagttaatgcttcaaccactgatcctggtagt
atactgatggaatccttgagcactcgtgaaaaggtggatgacatgatttcacagagtcag
gatcactttgagcaacagcaaaaagaacattcacaaagtctagaagaactagctgacaaa
ttgcaaagtctagacctctcaccattaagcaaaaagatttgtggtggccctgcaggaatg
ccatgtaccgaagcggagtgtggtggtccaaactgtcgtgctgatgatggaaccagaaag
tgtggtggcattggctgtgatggacttgtaactttggcccataatgcatggcagcattcc
atggcttttgacactgagattctaaatgctttggcagaagtggatcagctttcaaaaatg
gttgctgatgcaaaagttaaagcagatgaagctaaactaaatgcacaaaaggtcttgtta
agaaccaacgcaacaaaagacaaagtggacaagagcaatgaagacctaagaaatcttatt
aaacaaatcagagaatttcttacacaggacggcgctgatctggagagcattgaggcagtt
gccaatgaagtactgaagttagaaatgcccaccactcctcagcagcttcaggacctgacc
aatgacattcgggaccgagtggagagtctgtcagacgtggaagtgattctaaaccagagt
gctgcagatattgagcgggctgaagcattgttggatgaagccaggaaggccaaaatccat
gcaacagatgttaaagttgcagctgatcgtgtgaaggaggccttggatgaagcggaaaag
gcacagaacgcagctgtgaaagcaattaaacaagctaacgaagacattgagggaacacag
gaccttctgacctcaattgaatccgagacagtagcatcagaacaaagcctcaacaatgca
actgaacgcctggcacagattgaaaaggacattgatgaaataaaacaaaagaccactgac
aacacacacactgcagaaaacattggggacacagcagataaaataaagcagactgcagat
gaagccaaacaggtactcgacactgtcctgaaaggcaagtacaccgttgtggaagacacc
atcatcaaaaaatctgatgcagcttctgatgctcggaaaaaagccaagttattgcaggtc
gaagctgaatctttgttatcagatgcaagtcggaaacttgagttattaaagaaactggaa
aaaagttatgaagacaaccaaaaagctttggaggaaaaagcccaaaagttaataaaactg
gaagaagatgtgcgcttattgctgcaaacgattagccagaaggttgccatctacagtacc
tgtttataa
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